mRNA_P-wetherbeei_contig19362.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19362.1.1
Unique NamemRNA_P-wetherbeei_contig19362.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig19362.1.1 vs. uniprot
Match: A0A067BPR7_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BPR7_SAPPC)

HSP 1 Score: 120 bits (301), Expect = 1.080e-31
Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 1 
Query:    1 QVNQFLESGVGGQISWGMVCGFCSGFAVKKASKVAAMLFGSVFCLLQGLSYNGFVAVDYNKMEGKAMDYLDMDGDGKFDYKDVSLMYDKLMDVLAFNIPAGDAVAQAF 324
            +VN FL SG GGQISWG + G CSGFA+KK SKV A++ G  F  +Q  SY G++ V+Y K+E    D LD++ DGKFD KDV +MY K+MD+L F++PAG   A  F
Sbjct:  119 RVNDFLASGQGGQISWGFMMGACSGFALKKVSKVGAVMLGCAFMAMQCASYYGYLDVNYKKLERDITDMLDINKDGKFDAKDVQVMYKKMMDILEFSLPAGSGYAAGF 226
[Close]
BLAST of mRNA_P-wetherbeei_contig19362.1.1 vs. uniprot
Match: A0A7S3UWL8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL8_HETAK)

HSP 1 Score: 119 bits (298), Expect = 2.150e-31
Identity = 55/100 (55.00%), Postives = 74/100 (74.00%), Query Frame = 1 
Query:    4 VNQFLESGVGGQISWGMVCGFCSGFAVKKASKVAAMLFGSVFCLLQGLSYNGFVAVDYNKMEGKAMDYLDMDGDGKFDYKDVSLMYDKLMDVLAFNIPAG 303
            V+  +ESGVG Q+S G+V G CSGFAVKK  K+AA +FGS FC+LQGLSY+G++ ++Y KM+      LD DGDGKFD  D+ + Y K+ +VL +N+PAG
Sbjct:  106 VDHVIESGVGQQLSTGLVFGICSGFAVKKIGKLAAFVFGSGFCVLQGLSYSGYITLNYKKMDDSLKQLLDADGDGKFDSTDIQIWYSKMENVLTYNLPAG 205
[Close]
BLAST of mRNA_P-wetherbeei_contig19362.1.1 vs. uniprot
Match: A0A6A3LI43_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LI43_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.210e-30
Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = 1 
Query:    1 QVNQFLESGVGGQISWGMVCGFCSGFAVKKASKVAAMLFGSVFCLLQGLSYNGFVAVDYNKMEGKAMDYLDMDGDGKFDYKDVSLMYDKLMDVLAFNIPAGDAVAQAF 324
            QV++FL SG GGQISWG   G CSGFA+KK SK+ A+  G++F LLQ  SY+G+V VDY K+E     YLD++ DG FD KD+  MY  +M VL FN+PAG      F
Sbjct:  148 QVDEFLASGKGGQISWGFCMGACSGFALKKISKLGAVAIGTIFILLQCASYSGYVDVDYKKLERDVKSYLDINKDGVFDTKDLDSMYKSIMKVLEFNLPAGSGFVAGF 255
[Close]
BLAST of mRNA_P-wetherbeei_contig19362.1.1 vs. uniprot
Match: A0A1V9ZP02_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZP02_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.340e-30
Identity = 57/108 (52.78%), Postives = 73/108 (67.59%), Query Frame = 1 
Query:    1 QVNQFLESGVGGQISWGMVCGFCSGFAVKKASKVAAMLFGSVFCLLQGLSYNGFVAVDYNKMEGKAMDYLDMDGDGKFDYKDVSLMYDKLMDVLAFNIPAGDAVAQAF 324
            +VN FL SG GGQISWG + G CSGFA+KK SKV A++ G  F  +Q  SY G++ V+Y K+E    D LD + DGKFD KD+  MY K+M+VL F++PAG   A  F
Sbjct:  123 RVNDFLASGQGGQISWGFMMGACSGFALKKVSKVGAVMIGCAFMAMQTASYYGYLDVNYKKLERDITDMLDFNKDGKFDSKDIEAMYKKMMNVLEFSLPAGSGYAAGF 230
[Close]
BLAST of mRNA_P-wetherbeei_contig19362.1.1 vs. uniprot
Match: G4ZJ05_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJ05_PHYSP)

HSP 1 Score: 119 bits (299), Expect = 2.790e-30
Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 1 
Query:    1 QVNQFLESGVGGQISWGMVCGFCSGFAVKKASKVAAMLFGSVFCLLQGLSYNGFVAVDYNKMEGKAMDYLDMDGDGKFDYKDVSLMYDKLMDVLAFNIPAGDAVAQAF 324
            QV++FL SG GGQISWG   G CSGFA+KK SK+ A+  G++F LLQ  SY+G+V VDY K+E    +YLD++ DG FD KD+  MY  LM VL F++PAG   A  F
Sbjct:  242 QVDEFLASGKGGQISWGFCMGACSGFALKKVSKLGAVAIGTIFILLQCASYSGYVDVDYKKLERDVRNYLDINKDGVFDTKDLDSMYKSLMKVLEFSLPAGSGFAAGF 349
[Close]
BLAST of mRNA_P-wetherbeei_contig19362.1.1 vs. uniprot
Match: K3XC34_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XC34_GLOUD)

HSP 1 Score: 117 bits (292), Expect = 4.880e-30
Identity = 55/108 (50.93%), Postives = 74/108 (68.52%), Query Frame = 1 
Query:    1 QVNQFLESGVGGQISWGMVCGFCSGFAVKKASKVAAMLFGSVFCLLQGLSYNGFVAVDYNKMEGKAMDYLDMDGDGKFDYKDVSLMYDKLMDVLAFNIPAGDAVAQAF 324
            Q+N F+ SG GGQISWG   G CSGFA+KK SK  A+  G++F LLQ  SY+G++ VDY K+E   M +LD++ DG+FD KD+  +Y  +M VL F++PAG   A  F
Sbjct:  149 QINDFVASGKGGQISWGFAMGVCSGFALKKISKAGAIALGTLFVLLQCASYSGYIDVDYQKLERDVMSFLDINKDGQFDTKDMESLYKSVMQVLEFSLPAGSGYAIGF 256
[Close]
BLAST of mRNA_P-wetherbeei_contig19362.1.1 vs. uniprot
Match: A0A329SEY2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SEY2_9STRA)

HSP 1 Score: 116 bits (291), Expect = 5.480e-30
Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 1 
Query:    1 QVNQFLESGVGGQISWGMVCGFCSGFAVKKASKVAAMLFGSVFCLLQGLSYNGFVAVDYNKMEGKAMDYLDMDGDGKFDYKDVSLMYDKLMDVLAFNIPAGDAVAQAF 324
            +V++FL SG GGQISWG   G CSGFA+KK SK+ A+  GS+F LLQ  SY+G+V VDY K+E     YLD++ DG FD KD+  MY  +M VL F++PAG   A  F
Sbjct:  139 KVDEFLVSGKGGQISWGFCMGACSGFALKKVSKLGAVAIGSLFILLQCASYSGYVDVDYKKLERDVKSYLDINKDGVFDTKDLDSMYKSVMKVLEFSLPAGSGFAAGF 246
[Close]
BLAST of mRNA_P-wetherbeei_contig19362.1.1 vs. uniprot
Match: A0A0W8DAE2_PHYNI (1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DAE2_PHYNI)

HSP 1 Score: 115 bits (287), Expect = 5.670e-30
Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = 1 
Query:    1 QVNQFLESGVGGQISWGMVCGFCSGFAVKKASKVAAMLFGSVFCLLQGLSYNGFVAVDYNKMEGKAMDYLDMDGDGKFDYKDVSLMYDKLMDVLAFNIPAGDAVAQAF 324
            +V++FL SG  GQISWG   G CSGFA+KK SK+ A+  GS+F LLQ  SY+G+V VDY K+E     YLD++ DG FD KDV  MY  +M VL F++PAG   A  F
Sbjct:   84 KVDEFLASGKAGQISWGFCMGACSGFALKKVSKLGAVAIGSLFVLLQCASYSGYVDVDYKKLERDFKSYLDINKDGVFDTKDVDSMYKSVMKVLEFSLPAGSGFAAGF 191
[Close]
BLAST of mRNA_P-wetherbeei_contig19362.1.1 vs. uniprot
Match: A0A2D4BMF4_PYTIN (EF-hand domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMF4_PYTIN)

HSP 1 Score: 116 bits (290), Expect = 9.480e-30
Identity = 57/108 (52.78%), Postives = 73/108 (67.59%), Query Frame = 1 
Query:    1 QVNQFLESGVGGQISWGMVCGFCSGFAVKKASKVAAMLFGSVFCLLQGLSYNGFVAVDYNKMEGKAMDYLDMDGDGKFDYKDVSLMYDKLMDVLAFNIPAGDAVAQAF 324
            QVN FL SG GGQISWG + G CSGFA+KK SKV A+  G+VF L Q  SY+G++ V+Y K+E   MD LD++ DGK D KD+  +Y  +M VL F++PAG      F
Sbjct:  148 QVNDFLASGKGGQISWGFMMGVCSGFALKKVSKVGAVALGTVFILFQCASYSGYIDVNYKKIERDMMDMLDVNKDGKLDAKDIDEVYQAVMKVLEFSLPAGSGFGVGF 255
[Close]
BLAST of mRNA_P-wetherbeei_contig19362.1.1 vs. uniprot
Match: W2PS28_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2PS28_PHYPN)

HSP 1 Score: 115 bits (287), Expect = 2.170e-29
Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = 1 
Query:    1 QVNQFLESGVGGQISWGMVCGFCSGFAVKKASKVAAMLFGSVFCLLQGLSYNGFVAVDYNKMEGKAMDYLDMDGDGKFDYKDVSLMYDKLMDVLAFNIPAGDAVAQAF 324
            +V++FL SG  GQISWG   G CSGFA+KK SK+ A+  GS+F LLQ  SY+G+V VDY K+E     YLD++ DG FD KDV  MY  +M VL F++PAG   A  F
Sbjct:  139 KVDEFLASGKAGQISWGFCMGACSGFALKKVSKLGAVAIGSLFVLLQCASYSGYVDVDYKKLERDFKSYLDINKDGVFDTKDVDSMYKSVMKVLEFSLPAGSGFAAGF 246
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19362.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067BPR7_SAPPC1.080e-3153.70Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A7S3UWL8_HETAK2.150e-3155.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A6A3LI43_9STRA1.210e-3053.70Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A1V9ZP02_9STRA1.340e-3052.78Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
G4ZJ05_PHYSP2.790e-3054.63Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
K3XC34_GLOUD4.880e-3050.93Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A329SEY2_9STRA5.480e-3053.70Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A0W8DAE2_PHYNI5.670e-3053.701-aminocyclopropane-1-carboxylate deaminase n=1 Ta... [more]
A0A2D4BMF4_PYTIN9.480e-3052.78EF-hand domain-containing protein n=1 Tax=Pythium ... [more]
W2PS28_PHYPN2.170e-2953.70Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19362contigP-wetherbeei_contig19362:356..1055 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog36331.EPrPI00000017582
PFAMsFUN14
Model size333
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons2
Evalue7.45e-34
EggNOG OGsKOG4099@1|root,KOG4099@2759|Eukaryota,1MCMV@121069|Pythiales
Ec32 ortholog descriptionFUN14
Ec32 orthologEc-23_000420.1
DescriptionFUN14 family domain-containing protein. Source PGD
Cds size333
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186170.2873945-CDS-P-wetherbeei_contig19362:355..5381683186170.2873945-CDS-P-wetherbeei_contig19362:355..538Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19362 356..538 +
1683186170.296318-CDS-P-wetherbeei_contig19362:905..10551683186170.296318-CDS-P-wetherbeei_contig19362:905..1055Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19362 906..1055 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19362.1.1prot_P-wetherbeei_contig19362.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19362 356..1055 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19362.1.1

>prot_P-wetherbeei_contig19362.1.1 ID=prot_P-wetherbeei_contig19362.1.1|Name=mRNA_P-wetherbeei_contig19362.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp
QVNQFLESGVGGQISWGMVCGFCSGFAVKKASKVAAMLFGSVFCLLQGLS
YNGFVAVDYNKMEGKAMDYLDMDGDGKFDYKDVSLMYDKLMDVLAFNIPA
GDAVAQAFRF*
back to top

mRNA from alignment at P-wetherbeei_contig19362:356..1055+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19362.1.1 ID=mRNA_P-wetherbeei_contig19362.1.1|Name=mRNA_P-wetherbeei_contig19362.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=700bp|location=Sequence derived from alignment at P-wetherbeei_contig19362:356..1055+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTTAACCAATTTCTGGAGTCGGGCGTGGGCGGGCAGATCAGCTGGGG
CATGGTGTGCGGCTTCTGCTCAGGCTTCGCGGTCAAGAAGGCATCGAAGG
TGGCGGCGATGCTCTTCGGCAGTGTCTTCTGCCTGCTGCAGGGGCTCTCC
TACAACGGCTTCGTCGCTGTCGACTACAACAAGGTACAGCCGGTTGGTGG
TTTGAGAATGACTGTGGCTGTTGACGTCACTCTCTTTTGTGATACTAGTA
TCTGATACTAGTATCTGACACGCAACGAAGTTTTGCGAGGCCGCCGTTCC
ATCGCTTTCTCTTTGAGCGAGGGCTTTTTTTAATTTTTCAAAGCTGCTTA
CCCGTCTGCTTGCCTGTCTGCAACATTGGCGAGCAGATGGAGGCAAGAGG
AGGGACCGCCTAAGCAACCCCTTTCCTTCCGTTGCACACTATTATAGCAG
CCGCACTTCTCACCCTTCCACCCGCCCGCTCTCCTCCGTCAAACCCCCTG
CGGCTGCTGCGATATCTGCCGCGATACTGCCTGCAATCGTCTGCGTGCAG
ATGGAGGGCAAGGCGATGGACTACCTCGACATGGATGGCGACGGAAAGTT
CGACTACAAGGACGTCTCGCTGATGTATGACAAGCTCATGGACGTCCTCG
CCTTCAACATCCCCGCAGGTGACGCGGTGGCTCAGGCTTTCCGTTTTTAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig19362:356..1055+

>mRNA_P-wetherbeei_contig19362.1.1 ID=mRNA_P-wetherbeei_contig19362.1.1|Name=mRNA_P-wetherbeei_contig19362.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig19362:356..1055+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTTAACCAATTTCTGGAGTCGGGCGTGGGCGGGCAGATCAGCTGGGG
CATGGTGTGCGGCTTCTGCTCAGGCTTCGCGGTCAAGAAGGCATCGAAGG
TGGCGGCGATGCTCTTCGGCAGTGTCTTCTGCCTGCTGCAGGGGCTCTCC
TACAACGGCTTCGTCGCTGTCGACTACAACAAGATGGAGGGCAAGGCGAT
GGACTACCTCGACATGGATGGCGACGGAAAGTTCGACTACAAGGACGTCT
CGCTGATGTATGACAAGCTCATGGACGTCCTCGCCTTCAACATCCCCGCA
GGTGACGCGGTGGCTCAGGCTTTCCGTTTTTAA
back to top