mRNA_P-wetherbeei_contig19232.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19232.1.1 vs. uniprot
Match: A0A2W2CA59_9HYPH (50S ribosomal protein L17 n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2CA59_9HYPH) HSP 1 Score: 219 bits (559), Expect = 1.800e-71 Identity = 112/142 (78.87%), Postives = 125/142 (88.03%), Query Frame = 1
Query: 1 MRHGFRGRRFNRTVPHRLAMFANMSAALIKHEQIVTTLPKAKDLRPVIEKLITLAKKGGLHARRQAMSQVRDETQVKKLFDILAARFKDRQGGYARIMKAGFRFGDNAPMAVIEFVDRDPSEKGKDSGPSMKTGEETKEAVA 426
MRHGFRGRRFNRT HR AMFANM+AALIKHEQIVTTLPKAKDLRPV+EKL+TL K+GGLHARRQA++QVRDETQVKKLFD+LA R+ R GGY RIMKAGFR+GD APMAVIEFVDRD + +G DSGPS K GE++ EA A
Sbjct: 1 MRHGFRGRRFNRTAEHREAMFANMAAALIKHEQIVTTLPKAKDLRPVVEKLVTLGKQGGLHARRQALAQVRDETQVKKLFDVLAKRYGARSGGYLRIMKAGFRYGDQAPMAVIEFVDRDVNARGLDSGPSQK-GEDSAEAAA 141
BLAST of mRNA_P-wetherbeei_contig19232.1.1 vs. uniprot
Match: UPI001E57B9FA (50S ribosomal protein L17 n=1 Tax=Microvirga sp. SM2 TaxID=2883126 RepID=UPI001E57B9FA) HSP 1 Score: 215 bits (547), Expect = 1.180e-69 Identity = 105/131 (80.15%), Postives = 117/131 (89.31%), Query Frame = 1
Query: 1 MRHGFRGRRFNRTVPHRLAMFANMSAALIKHEQIVTTLPKAKDLRPVIEKLITLAKKGGLHARRQAMSQVRDETQVKKLFDILAARFKDRQGGYARIMKAGFRFGDNAPMAVIEFVDRDPSEKGKDSGPSM 393
MRHGFRGRRFNRT HR AMFANMSAAL+KHEQIVTTLPKAKDLRPV+EKLIT+AK+G LHARR AMS++RDE VKKLFD+L R+KDRQGGY RIMKAGFR+GDNAPMAVIEFVDRD +G+DSGP+
Sbjct: 1 MRHGFRGRRFNRTAEHRKAMFANMSAALVKHEQIVTTLPKAKDLRPVVEKLITMAKRGDLHARRLAMSKLRDEAMVKKLFDVLGPRYKDRQGGYTRIMKAGFRYGDNAPMAVIEFVDRDVDARGQDSGPTQ 131
BLAST of mRNA_P-wetherbeei_contig19232.1.1 vs. uniprot
Match: A0A4R7C7R7_9HYPH (50S ribosomal protein L17 n=1 Tax=Enterovirga rhinocerotis TaxID=1339210 RepID=A0A4R7C7R7_9HYPH) HSP 1 Score: 214 bits (546), Expect = 1.670e-69 Identity = 111/142 (78.17%), Postives = 119/142 (83.80%), Query Frame = 1
Query: 1 MRHGFRGRRFNRTVPHRLAMFANMSAALIKHEQIVTTLPKAKDLRPVIEKLITLAKKGGLHARRQAMSQVRDETQVKKLFDILAARFKDRQGGYARIMKAGFRFGDNAPMAVIEFVDRDPSEKGKDSGPSMKTGEETKEAVA 426
MRHGFRGRRFNR+ HR AMFANMSAALIKHEQIVTTLPKAKDLRPV+EKLITL K+G LHARR AMSQ+RDE VKKLF +L R+KDR GGY R+MKAGFR GDNAP+AVIEFVDRD KGKDSGPS K ET EA A
Sbjct: 1 MRHGFRGRRFNRSAEHRKAMFANMSAALIKHEQIVTTLPKAKDLRPVVEKLITLGKRGDLHARRNAMSQLRDEDMVKKLFAVLGPRYKDRSGGYCRVMKAGFRQGDNAPLAVIEFVDRDVDAKGKDSGPSQKV--ETDEAAA 140
BLAST of mRNA_P-wetherbeei_contig19232.1.1 vs. uniprot
Match: UPI0003F50F4F (50S ribosomal protein L17 n=2 Tax=Salinarimonas TaxID=690086 RepID=UPI0003F50F4F) HSP 1 Score: 213 bits (543), Expect = 4.630e-69 Identity = 103/135 (76.30%), Postives = 119/135 (88.15%), Query Frame = 1
Query: 1 MRHGFRGRRFNRTVPHRLAMFANMSAALIKHEQIVTTLPKAKDLRPVIEKLITLAKKGGLHARRQAMSQVRDETQVKKLFDILAARFKDRQGGYARIMKAGFRFGDNAPMAVIEFVDRDPSEKGKDSGPSMKTGE 405
MRHGFRGRRFNRT HR AMF N++ ALIKHEQIVTTLPKAKDLRPV+EKLITL K+G LHARRQA+++++DET VKKLFD+L R+KDRQGGY R++KAGFR+GDNAPMAVIEFVDRDP KG+DSGPS + E
Sbjct: 1 MRHGFRGRRFNRTPEHRKAMFKNLAQALIKHEQIVTTLPKAKDLRPVVEKLITLGKRGDLHARRQAIARIQDETLVKKLFDVLGPRYKDRQGGYTRVLKAGFRYGDNAPMAVIEFVDRDPDAKGQDSGPSAEADE 135
BLAST of mRNA_P-wetherbeei_contig19232.1.1 vs. uniprot
Match: A0A5N3P539_9HYPH (50S ribosomal protein L17 n=1 Tax=Microvirga brassicacearum TaxID=2580413 RepID=A0A5N3P539_9HYPH) HSP 1 Score: 213 bits (543), Expect = 4.790e-69 Identity = 105/131 (80.15%), Postives = 116/131 (88.55%), Query Frame = 1
Query: 1 MRHGFRGRRFNRTVPHRLAMFANMSAALIKHEQIVTTLPKAKDLRPVIEKLITLAKKGGLHARRQAMSQVRDETQVKKLFDILAARFKDRQGGYARIMKAGFRFGDNAPMAVIEFVDRDPSEKGKDSGPSM 393
MRHGFRGRR NRT HR AMFANM+AALIKHEQIVTTLPKAKDLRP++EK+ITL K+G LHARRQAMSQ+RDE VKKLF +L R++DRQGGY RIMKAGFR+GDNAPMAVIEFVDRD S +GKDSGPS
Sbjct: 1 MRHGFRGRRLNRTTEHRKAMFANMAAALIKHEQIVTTLPKAKDLRPIVEKIITLGKRGDLHARRQAMSQLRDEDMVKKLFAVLGPRYQDRQGGYCRIMKAGFRYGDNAPMAVIEFVDRDVSARGKDSGPSQ 131
BLAST of mRNA_P-wetherbeei_contig19232.1.1 vs. uniprot
Match: RL17_METNO (50S ribosomal protein L17 n=20 Tax=Methylobacterium TaxID=407 RepID=RL17_METNO) HSP 1 Score: 213 bits (541), Expect = 9.650e-69 Identity = 104/140 (74.29%), Postives = 121/140 (86.43%), Query Frame = 1
Query: 1 MRHGFRGRRFNRTVPHRLAMFANMSAALIKHEQIVTTLPKAKDLRPVIEKLITLAKKGGLHARRQAMSQVRDETQVKKLFDILAARFKDRQGGYARIMKAGFRFGDNAPMAVIEFVDRDPSEKGKDSGPSMKTGEETKEA 420
MRHGFRGRRFNRTV HR AMFANMSAALIKHEQI+TTLPKAKDLRPV+EKLITL K+G LHARRQA++Q+RDE VKKLF++L R++ R GGY RIMKAGFR+GDNAPMAVIEFVDRD + +G+DSGP+ +T+ A
Sbjct: 1 MRHGFRGRRFNRTVEHRKAMFANMSAALIKHEQIITTLPKAKDLRPVVEKLITLGKRGDLHARRQAIAQIRDEAMVKKLFEVLGPRYQTRPGGYCRIMKAGFRYGDNAPMAVIEFVDRDVNARGQDSGPTQAAASQTEAA 140
BLAST of mRNA_P-wetherbeei_contig19232.1.1 vs. uniprot
Match: UPI000FFCA3FE (50S ribosomal protein L17 n=1 Tax=Methylobacterium crusticola TaxID=1697972 RepID=UPI000FFCA3FE) HSP 1 Score: 212 bits (539), Expect = 1.880e-68 Identity = 104/131 (79.39%), Postives = 116/131 (88.55%), Query Frame = 1
Query: 1 MRHGFRGRRFNRTVPHRLAMFANMSAALIKHEQIVTTLPKAKDLRPVIEKLITLAKKGGLHARRQAMSQVRDETQVKKLFDILAARFKDRQGGYARIMKAGFRFGDNAPMAVIEFVDRDPSEKGKDSGPSM 393
MRHGFRGRRFNRTV HR AMFANMSAALIKHEQI+TTLPKAKDLRPV+EKLITL K+G LHARRQA++Q+RDE V+KLFD+L R++ R GGY RIMKAGFR+GDNAPMAVIEFVDRD +GKDSGPS
Sbjct: 1 MRHGFRGRRFNRTVEHRKAMFANMSAALIKHEQIITTLPKAKDLRPVVEKLITLGKRGDLHARRQAIAQIRDEGMVRKLFDVLGPRYQARPGGYCRIMKAGFRYGDNAPMAVIEFVDRDVDARGKDSGPSQ 131
BLAST of mRNA_P-wetherbeei_contig19232.1.1 vs. uniprot
Match: A0A849I629_9HYPH (50S ribosomal protein L17 n=1 Tax=Enterovirga sp. DB1703 TaxID=2730920 RepID=A0A849I629_9HYPH) HSP 1 Score: 210 bits (535), Expect = 7.660e-68 Identity = 102/133 (76.69%), Postives = 117/133 (87.97%), Query Frame = 1
Query: 1 MRHGFRGRRFNRTVPHRLAMFANMSAALIKHEQIVTTLPKAKDLRPVIEKLITLAKKGGLHARRQAMSQVRDETQVKKLFDILAARFKDRQGGYARIMKAGFRFGDNAPMAVIEFVDRDPSEKGKDSGPSMKT 399
MRHGFRGRRFNRT HR AMFANMSAALIKHEQIVTTLPKAKDLRPV+EKL+TL K+GGLHARRQA++Q+RDE V+KLFD+L R++ R GGY R++KAGFR GDNAPMAVIEFVDRD +G+DSGP+ KT
Sbjct: 1 MRHGFRGRRFNRTAEHRKAMFANMSAALIKHEQIVTTLPKAKDLRPVVEKLVTLGKRGGLHARRQAIAQLRDEAMVRKLFDVLGPRYQARPGGYTRVLKAGFRQGDNAPMAVIEFVDRDVDARGQDSGPTQKT 133
BLAST of mRNA_P-wetherbeei_contig19232.1.1 vs. uniprot
Match: A0A1G5K603_9HYPH (50S ribosomal protein L17 n=3 Tax=Microvirga TaxID=186650 RepID=A0A1G5K603_9HYPH) HSP 1 Score: 210 bits (535), Expect = 7.920e-68 Identity = 103/132 (78.03%), Postives = 116/132 (87.88%), Query Frame = 1
Query: 1 MRHGFRGRRFNRTVPHRLAMFANMSAALIKHEQIVTTLPKAKDLRPVIEKLITLAKKGGLHARRQAMSQVRDETQVKKLFDILAARFKDRQGGYARIMKAGFRFGDNAPMAVIEFVDRDPSEKGKDSGPSMK 396
MRHGFRGRRFNRT HR AMFANM+AALIKHEQIVTTLPKAKDLRPV+EKLITL K+G LHARRQAMSQ+RDE VKKLF IL R+++R GGY R++KAGFR+GDNAPMAVIEFVDRD +G+DSGP+ K
Sbjct: 1 MRHGFRGRRFNRTTEHRKAMFANMAAALIKHEQIVTTLPKAKDLRPVVEKLITLGKRGDLHARRQAMSQLRDEAMVKKLFAILGPRYQERNGGYTRVLKAGFRYGDNAPMAVIEFVDRDVDARGQDSGPTQK 132
BLAST of mRNA_P-wetherbeei_contig19232.1.1 vs. uniprot
Match: UPI00118686A7 (50S ribosomal protein L17 n=1 Tax=Rhodoligotrophos appendicifer TaxID=987056 RepID=UPI00118686A7) HSP 1 Score: 210 bits (535), Expect = 7.920e-68 Identity = 106/143 (74.13%), Postives = 122/143 (85.31%), Query Frame = 1
Query: 1 MRHGFRGRRFNRTVPHRLAMFANMSAALIKHEQIVTTLPKAKDLRPVIEKLITLAKKGGLHARRQAMSQVRDETQVKKLFDILAARFKDRQGGYARIMKAGFRFGDNAPMAVIEFVDRDPSEKGKDSGPSMKTGEETKEAVAA 429
MRHG GR+ NRT HR AMFANM+A+LIKHEQIVTTLPKAK+LRP++EKLITLAKKGGLH RRQA+SQ+RD TQV KLFD L AR++ RQGGY R++KAGFR+GDNAP+AVIEFVDRDP KGKDSGP G+ET+ A AA
Sbjct: 1 MRHGKSGRKLNRTASHRKAMFANMAASLIKHEQIVTTLPKAKELRPIVEKLITLAKKGGLHRRRQAISQIRDITQVGKLFDTLGARYEGRQGGYTRVLKAGFRYGDNAPLAVIEFVDRDPEAKGKDSGP---VGDETESAAAA 140 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19232.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19232.1.1 >prot_P-wetherbeei_contig19232.1.1 ID=prot_P-wetherbeei_contig19232.1.1|Name=mRNA_P-wetherbeei_contig19232.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp MRHGFRGRRFNRTVPHRLAMFANMSAALIKHEQIVTTLPKAKDLRPVIEKback to top mRNA from alignment at P-wetherbeei_contig19232:148..579+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19232.1.1 ID=mRNA_P-wetherbeei_contig19232.1.1|Name=mRNA_P-wetherbeei_contig19232.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig19232:148..579+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19232:148..579+ >mRNA_P-wetherbeei_contig19232.1.1 ID=mRNA_P-wetherbeei_contig19232.1.1|Name=mRNA_P-wetherbeei_contig19232.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig19232:148..579+ (Phaeothamnion wetherbeei SAG_119_79)back to top |