mRNA_P-wetherbeei_contig1915.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1915.4.2
Unique NamemRNA_P-wetherbeei_contig1915.4.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A835Z9X0_9STRA (Tubby C-terminal-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X0_9STRA)

HSP 1 Score: 300 bits (767), Expect = 8.140e-100
Identity = 150/250 (60.00%), Postives = 187/250 (74.80%), Query Frame = 1
Query:   37 LVQCVIMRERTGMYRLYPCYRMYFQDNDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
            ++QCVI+RER G++RLYP Y++YFQD D L+M AQKH+KSRTSNYHIFDMHR  A     L KK GNYLGK+R+N+K+T+N I TND+++EE+GA+LFE+PGLVD + +GSQPRKF V LP    D  P+PH+VDP+                    GP +VE LKA +T  + LL+TK+P +ENGNYRLNFRGRVTVPSVKNFQLV P +   ++ QFGKV DDRFHLD+R  + AFQAFAIAL+QFNF
Sbjct:    1 MMQCVILRERQGLHRLYPLYKLYFQDRDTLMMAAQKHSKSRTSNYHIFDMHRGSAA--RTLSKKGGNYLGKVRSNFKKTDNTIYTNDQEKEELGAVLFEKPGLVDHVMEGSQPRKFYVLLPPIDADSTPIPHKVDPYDPQ-----------------GP-MVELLKARRTGKMFLLQTKDPVFENGNYRLNFRGRVTVPSVKNFQLVAPDDVDYIVGQFGKVGDDRFHLDFRAPLNAFQAFAIALSQFNF 230          
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A7S3YIB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB9_HETAK)

HSP 1 Score: 276 bits (707), Expect = 1.810e-90
Identity = 143/255 (56.08%), Postives = 180/255 (70.59%), Query Frame = 1
Query:   22 GVHSELVQCVIMRERTGMYRLYPCYRMYFQDNDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
            G  +E+V+C ++R+RTG  RLYP YRMYFQD D L +VAQK +K+RTSNYHIFDM R  AG G+ L KK+GNYLGKLR+N K+TENVI TND ++EE+GAI FE+ G +DQ+++GSQPRK  + LP    DG PLP++       E G  ++            SL+ ++K GQT  +   E+K+P +E GNYRLNF GRVTV SVKNFQLV P +   V+CQFGKV +DRFHLDYR    AFQAFA+ L QFNF
Sbjct:   12 GAGAEMVRCAVVRDRTGARRLYPQYRMYFQDTDTLALVAQKQSKNRTSNYHIFDMMR--AGFGNHLSKKNGNYLGKLRSNSKKTENVIFTNDHEKEELGAITFEKTGFMDQVKEGSQPRKLKIILPQLDPDGIPLPNKP------ERGRPET------------SLLSRVKIGQTGRMFYFESKDPVFEKGNYRLNFHGRVTVASVKNFQLVSPDDIDYVVCQFGKVDEDRFHLDYRAPFNAFQAFAVTLCQFNF 246          
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: D7FYS0_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS0_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 3.890e-88
Identity = 146/263 (55.51%), Postives = 190/263 (72.24%), Query Frame = 1
Query:    1 LMTAYEHGVHSELVQCVIMRERTGMYRLYPCYRMYFQDN-DKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
            LM +YE G +S+LVQCV++R+R+GM RLYP YR +F+   D+L+MVAQK +K+RTSNYH+FDM+R G    + L KK+GNYLGK+R N KRTE  + TND++  E+GAI FE+PGLVD +RDGSQPRKF V LPA   DG+P+ H+VDP+      + DS             ++ ++K G+   + LL+++EP+Y  GNYRLNF GRVTVPSVKNFQLV P +    +CQFGKV +DRFHLDYR  I AFQA  I++AQFNF
Sbjct:  352 LMLSYERGNNSDLVQCVVVRDRSGMNRLYPQYRFFFEGRGDQLMMVAQKCSKNRTSNYHVFDMNRGGFQ--TRLSKKNGNYLGKVRTNLKRTEATVFTNDQEVAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPY------DADS------------DMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDALHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 594          
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A7S2V188_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V188_9STRA)

HSP 1 Score: 239 bits (611), Expect = 1.930e-76
Identity = 126/229 (55.02%), Postives = 161/229 (70.31%), Query Frame = 1
Query:  100 MYFQDNDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
            MYFQD D+LVMV +K A++RT NYHIFDM R  A  G+ L KK+GNYLGKLR N ++T+ +I TND +REEMGAI+F +PG VDQ+++GSQPRK  V LP    DG P+P++ +P         D+            SL+E+L++ +T  +  L+TK+P +E GNYRLNF GRVTV SVKNFQL  P +   V+CQFGKV +DRFHLDYR  + AFQAFA+AL QFNF
Sbjct:    1 MYFQDRDQLVMVGKKQAQNRTPNYHIFDMTR--AQFGNHLSKKNGNYLGKLRTNLRKTDTIIYTNDAEREEMGAIIFNKPGFVDQVKEGSQPRKLHVLLPQLDADGVPVPNKPNPR------RPDT------------SLLERLRSAKTGKMFCLQTKDPVFEKGNYRLNFHGRVTVASVKNFQLCSPDDIDYVVCQFGKVDEDRFHLDYRAPLNAFQAFALALVQFNF 209          
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A7S2GC62_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC62_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.150e-69
Identity = 122/266 (45.86%), Postives = 172/266 (64.66%), Query Frame = 1
Query:    7 TAYEHGVHSELVQCVIMRERTGMYRLYPCYRMYFQD-----NDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQ-GLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
            T  + G +  +VQC+I+R+R+G+ RL P Y +Y Q      ++KL+++A+K A     +YHI+++ R     G  LRKK GNY+GKL+ +  + ENV+  N+  ++E+GA+LF +P ++D MRDG+QPRK  V LP A E+  P+P + + F    AG                 L+ +L++ Q + G   LE KEP +ENGNYRLNF GRVTVPSVKNFQLV P +   V+CQFGKV DDRFHLD++G +  FQAF +ALAQFN+
Sbjct:    2 TVVKGGPNDPMVQCLIVRDRSGLKRLNPEYNLYLQGGRKKGSEKLILIARKQAHKNGCSYHIYNVSR--GHMGGRLRKKGGNYVGKLKCSGTKIENVMYNNEEVKDEIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQK-NKFNDPYAG-----------------LLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 247          
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A7S2D0G1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D0G1_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.510e-66
Identity = 122/266 (45.86%), Postives = 172/266 (64.66%), Query Frame = 1
Query:    7 TAYEHGVHSELVQCVIMRERTGMYRLYPCYRMYFQD-----NDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQ-GLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
            T  + G +  +VQC+I+R+R+G+ RL P Y +Y Q      ++KL+++A+K A     +YHI+++ R     G  LRKK GNY+GKL+ +  + ENV+  N+  ++E+GA+LF +P ++D MRDG+QPRK  V LP A E+  P+P + + F    AG                 L+ +L++ Q + G   LE KEP +ENGNYRLNF GRVTVPSVKNFQLV P +   V+CQFGKV DDRFHLD++G +  FQAF +ALAQFN+
Sbjct:  221 TVAKGGPNDPMVQCLIVRDRSGLKRLNPEYNLYLQGGRKKGSEKLILIARKQAHKNGCSYHIYNVSR--GHMGGRLRKKGGNYVGKLKCSGTKIENVMYNNEEVKDEIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQK-NKFNDPYAG-----------------LLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 466          
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A7S2H5B0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H5B0_9STRA)

HSP 1 Score: 201 bits (512), Expect = 9.180e-59
Identity = 110/256 (42.97%), Postives = 162/256 (63.28%), Query Frame = 1
Query:   37 LVQCVIMRERTGMYRLYPCYRMYFQD-----NDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQT-QGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
            +VQC+I+R R  + R+   Y++Y Q      ++KL++VA+K A+ +  +YHI+++ R   G    L KK GNY+GKL+ +  + ENV+  N+  ++E+G ++F +P ++D MRDG+QPRK  + +P   E   P+P  V                 F+  +GG  L+ +++  +  QG  + E KEP +ENGNYRLNFRGRVTVPSVKNFQLV   +   + CQFGKVADDRFHLD++  + AFQAF + LAQFN+
Sbjct:  194 MVQCLIVRRRVVLQRITE-YQLYLQGGRKKGHEKLILVARKQAQKQGCSYHIYNVSRGHLG--GRLNKKGGNYVGKLKCSGSKIENVMYNNEEKKQEVGGVMFMKPSIMDHMRDGAQPRKLKLIVPPINEKNCPIPQPVK----------------FNDPYGG--LLAQIQVDEIEQGCSVFERKEPVFENGNYRLNFRGRVTVPSVKNFQLVSTDDVSDIKCQFGKVADDRFHLDFKHPMNAFQAFCVCLAQFNY 428          
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A1W0A956_9STRA (Tub domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A956_9STRA)

HSP 1 Score: 197 bits (502), Expect = 3.770e-58
Identity = 119/252 (47.22%), Postives = 150/252 (59.52%), Query Frame = 1
Query:   37 LVQCVIMRERTGMYRLYPCYRMYFQDNDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDG--APLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
            L +  I+R   G  RL P Y+ + ++  KLV++AQK  K+RTSNYHIFDM          L KKSGNY+GKLR+ + R ENV++++  ++ E+GAI FE           S+PRK  V  P   +DG    +P +VD F S                     LVE+LK GQT  L++LE KEP YE G YRLNF GRV+VPSVKNFQLV  G    V+ QFGKV+D  FHLD+R  +  FQAFAIAL QFNF
Sbjct:  127 LTEGSIVRCNQGANRLTPQYQFFVKN--KLVLLAQKQLKNRTSNYHIFDMSCGTVAASHKLSKKSGNYIGKLRSCFGRHENVMISSQEEKRELGAITFETKS------SHSKPRKLTVICPGLTKDGDAKSVPSKVDSFSS---------------------LVEQLKLGQTSDLIVLENKEPEYEKGCYRLNFNGRVSVPSVKNFQLVLRGTKQGVILQFGKVSDKLFHLDFRHPLTPFQAFAIALCQFNF 349          
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A482S955_9ARCH (Tub domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S955_9ARCH)

HSP 1 Score: 192 bits (489), Expect = 2.050e-57
Identity = 114/269 (42.38%), Postives = 161/269 (59.85%), Query Frame = 1
Query:    1 LMTAYEHGVHSELVQCVIMRERTGMY-RLYPCYRMYFQDNDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRA-NYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKL------KAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFN 780
            ++ A+  GV ++ +QC ++R+R  +  +LYP Y +  ++  K ++ A K + +RTSNYH+FDM R  AG  S L KK+GNYLGKLRA N  R E  +L +  D+EE+  + FE+  L++Q+ +G+QPRK  + +             + P V     E     G +   FG PSL + L      K    + ++LLETKEP  ENGNYRLNF GRV +PSVKNFQ+V       +LCQFGKV +D FHLD++    A +AFA+AL QFN
Sbjct:    2 VLVAHPRGVRNQHIQCTVVRDRNSVGGKLYPSYELILENPRKTIIKACKMSYNRTSNYHLFDMTRGTAG--SKLSKKAGNYLGKLRARNTNRLECSLLNHKADKEELMGVSFEKMTLINQLTEGTQPRKMRILI-------------LRPDVVTGTTE-----GVYPSNFGSPSLSDLLLDVVDRKKSLPENMMLLETKEPVLENGNYRLNFFGRVNLPSVKNFQIVHYSNIDEILCQFGKVEEDMFHLDFKTPFNALEAFALALCQFN 250          
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A1V9ZE23_9STRA (Tub domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZE23_9STRA)

HSP 1 Score: 187 bits (476), Expect = 4.630e-54
Identity = 115/250 (46.00%), Postives = 149/250 (59.60%), Query Frame = 1
Query:   37 LVQCVIMRERTGMYRLYPCYRMYFQDNDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
            L +  I+R   G  RL P Y+ + ++  K+V++AQK   +RTSNYHIFDM R        L KKSGNY+GKLR+++ R ENV+++   ++ E+GAILFE           S+PRK  V  P    DG             EA    S    FS      SL+E++K G+T  L +L+ KEP YE G YRLNF GRV+VPSVKNFQLV  G    V+ QFGKV+D  FHLD+R  +  FQAFAIAL+QFN+
Sbjct:  145 LTEGSIVRCNHGANRLTPQYQFFIKN--KMVLLAQKQLNNRTSNYHIFDMSRGTGAATYKLSKKSGNYIGKLRSSFGRQENVMISAQAEKRELGAILFETK------TSHSKPRKLTVVCPGLTTDG-------------EAKSVLSTGDKFS------SLLEQVKLGRTADLAILDNKEPEYERGCYRLNFNGRVSVPSVKNFQLVLRGTKQGVILQFGKVSDKLFHLDFRHPLTPFQAFAIALSQFNY 367          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z9X0_9STRA8.140e-10060.00Tubby C-terminal-like domain-containing protein n=... [more]
A0A7S3YIB9_HETAK1.810e-9056.08Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FYS0_ECTSI3.890e-8855.51Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2V188_9STRA1.930e-7655.02Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2GC62_9STRA2.150e-6945.86Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2D0G1_9STRA1.510e-6645.86Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2H5B0_9STRA9.180e-5942.97Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1W0A956_9STRA3.770e-5847.22Tub domain-containing protein n=1 Tax=Thraustothec... [more]
A0A482S955_9ARCH2.050e-5742.38Tub domain-containing protein (Fragment) n=1 Tax=a... [more]
A0A1V9ZE23_9STRA4.630e-5446.00Tub domain-containing protein n=1 Tax=Achlya hypog... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1915contigP-wetherbeei_contig1915:3488..4581 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FYS0
PFAMsTub
Model size789
Max annot lvl2759|Eukaryota
KEGG koko:K19600
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.43e-88
EggNOG OGsKOG2502@1|root,KOG2502@2759|Eukaryota
Ec32 ortholog descriptionTubby C-terminal-like domain
Ec32 orthologEc-19_002290.1
Descriptionphosphatidylinositol binding
Cds size786
COG categoryS
BRITEko00000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186165.0057404-UTR-P-wetherbeei_contig1915:3487..34901683186165.0057404-UTR-P-wetherbeei_contig1915:3487..3490Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1915 3488..3490 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186165.0167055-CDS-P-wetherbeei_contig1915:3490..35981683186165.0167055-CDS-P-wetherbeei_contig1915:3490..3598Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1915 3491..3598 +
1683186165.0327115-CDS-P-wetherbeei_contig1915:3765..39021683186165.0327115-CDS-P-wetherbeei_contig1915:3765..3902Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1915 3766..3902 +
1683186165.0456393-CDS-P-wetherbeei_contig1915:4040..45811683186165.0456393-CDS-P-wetherbeei_contig1915:4040..4581Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1915 4041..4581 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1915.4.2prot_P-wetherbeei_contig1915.4.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1915 3491..4581 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1915.4.2

>prot_P-wetherbeei_contig1915.4.2 ID=prot_P-wetherbeei_contig1915.4.2|Name=mRNA_P-wetherbeei_contig1915.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp
MTAYEHGVHSELVQCVIMRERTGMYRLYPCYRMYFQDNDKLVMVAQKHAK
SRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRD
REEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVS
AEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQGLVLLETKEPSYENGNYR
LNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRGICAFQA
FAIALAQFNFN*
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mRNA from alignment at P-wetherbeei_contig1915:3488..4581+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1915.4.2 ID=mRNA_P-wetherbeei_contig1915.4.2|Name=mRNA_P-wetherbeei_contig1915.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1094bp|location=Sequence derived from alignment at P-wetherbeei_contig1915:3488..4581+ (Phaeothamnion wetherbeei SAG_119_79)
CTCATGACGGCGTACGAGCACGGTGTGCACAGCGAGCTGGTGCAGTGCGT CATCATGCGGGAGCGGACGGGCATGTACCGTCTTTACCCTTGCTACCGCA TGTATTTCCAGGTGCGTGTGTGTTAGGTTACGTAGCGGGATCCCGGAAAC TGAGAGGCAGCTTATAATCTATCGCTTTTTCAGCATCACGCCGGCCCCTT TCCGACGATCGCTTCGCGTTAGCGTTTCTAAATTCCGTAATCGAGTGTTT TCTCCCTCTGTTGCCTACTTCTCTCCAGGACAATGACAAGCTGGTCATGG TGGCACAAAAGCACGCCAAGTCTCGCACCAGCAATTACCACATATTTGAC ATGCACCGCCCGGGCGCCGGCCCCGGAAGCGTCCTCAGGAAGAAGAGCGG CAACTACCTCGGAAAGTGAGGCGTCTTTCCCGCTCCTTCACTATCCAACG GGCCCGCGATCTTTATTCAACCGCTTGCTTTGTCTCCGTTGATGGATTGA TTAATGCGTGCCCGTTTCTTCTCGTTCCGTCTTCCTTGCTTGCACAACGT CAGGCTGCGGGCAAATTACAAGCGCACCGAGAATGTTATCCTGACGAATG ATCGCGACCGCGAGGAGATGGGCGCCATCCTGTTCGAGCGGCCGGGGCTG GTCGACCAGATGCGGGACGGCTCCCAGCCCCGCAAGTTTGCGGTGGCGCT GCCGGCGGCGGCGGAGGATGGCGCGCCGCTGCCGCATCGTGTGGACCCGT TCGTGTCGGCCGAGGCCGGCGAGGAGGACAGTGGCTCGGGCGGCTTCAGC GGCGGCTTCGGCGGGCCGTCGCTCGTGGAGAAGCTGAAGGCTGGGCAGAC GCAGGGGCTCGTGCTGCTCGAGACAAAAGAGCCCAGCTACGAGAATGGCA ACTACCGGCTGAACTTCCGGGGCCGGGTGACGGTGCCGTCGGTGAAGAAC TTTCAGCTGGTGCGCCCCGGCGAGCCGGGGCTGGTCTTGTGCCAGTTCGG CAAGGTCGCAGACGACCGCTTTCACCTGGACTATCGCGGCATCTGCGCGT TCCAGGCCTTCGCCATCGCGCTGGCGCAGTTTAATTTCAACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1915:3488..4581+

>mRNA_P-wetherbeei_contig1915.4.2 ID=mRNA_P-wetherbeei_contig1915.4.2|Name=mRNA_P-wetherbeei_contig1915.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig1915:3488..4581+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGGCGTACGAGCACGGTGTGCACAGCGAGCTGGTGCAGTGCGTCAT
CATGCGGGAGCGGACGGGCATGTACCGTCTTTACCCTTGCTACCGCATGT
ATTTCCAGGACAATGACAAGCTGGTCATGGTGGCACAAAAGCACGCCAAG
TCTCGCACCAGCAATTACCACATATTTGACATGCACCGCCCGGGCGCCGG
CCCCGGAAGCGTCCTCAGGAAGAAGAGCGGCAACTACCTCGGAAAGCTGC
GGGCAAATTACAAGCGCACCGAGAATGTTATCCTGACGAATGATCGCGAC
CGCGAGGAGATGGGCGCCATCCTGTTCGAGCGGCCGGGGCTGGTCGACCA
GATGCGGGACGGCTCCCAGCCCCGCAAGTTTGCGGTGGCGCTGCCGGCGG
CGGCGGAGGATGGCGCGCCGCTGCCGCATCGTGTGGACCCGTTCGTGTCG
GCCGAGGCCGGCGAGGAGGACAGTGGCTCGGGCGGCTTCAGCGGCGGCTT
CGGCGGGCCGTCGCTCGTGGAGAAGCTGAAGGCTGGGCAGACGCAGGGGC
TCGTGCTGCTCGAGACAAAAGAGCCCAGCTACGAGAATGGCAACTACCGG
CTGAACTTCCGGGGCCGGGTGACGGTGCCGTCGGTGAAGAACTTTCAGCT
GGTGCGCCCCGGCGAGCCGGGGCTGGTCTTGTGCCAGTTCGGCAAGGTCG
CAGACGACCGCTTTCACCTGGACTATCGCGGCATCTGCGCGTTCCAGGCC
TTCGCCATCGCGCTGGCGCAGTTTAATTTCAACTGA
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