mRNA_P-wetherbeei_contig1891.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1891.2.1 vs. uniprot
Match: D8LJ79_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ79_ECTSI) HSP 1 Score: 200 bits (508), Expect = 1.010e-58 Identity = 106/206 (51.46%), Postives = 126/206 (61.17%), Query Frame = 2
Query: 242 PAFRKSMACLAPCGAALGPNLDSYHSAFGVLEYAHPLVLSLNGNTILTTDWWVPPLFAFAAVAIGGLYLTGDHLLDTPAPWRRPSWPAVCACIALFSSQYYASGLMTVLHVPPVPLAAALAAAAVAGSVAFDCTAVGLTVAAVTALLGPLVEATIINGTHLYRYIDVDGSGGLVLGCAPWIPLVYFLGGPAVGNLARAFYSTFSAS 859
PAFR + +A GA LGPNLD+YHSAFGVL Y HP+ L++ G+ ILTTDWWVPPLFA A IG LY+ D L+TP R P W V I+LFS QYY SGL+T + P L +LA A FD T GL V+ TA LGPL+E ++N T LY Y D G WIP+VYF GGPAVGNLAR Y+ A+
Sbjct: 85 PAFRSLLPPMAAAGALLGPNLDNYHSAFGVLAYKHPIELNVAGHLILTTDWWVPPLFAVAGAGIGALYILLDAALETPQAQREPLWRDVLLSISLFSFQYYLSGLLTAVGCPNWVLVGSLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNATDLYMYNGAD-----FFGVDSWIPIVYFCGGPAVGNLARTIYAKLLAA 285
BLAST of mRNA_P-wetherbeei_contig1891.2.1 vs. uniprot
Match: A0A7S1DHL9_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DHL9_HEMAN) HSP 1 Score: 154 bits (389), Expect = 9.620e-42 Identity = 88/197 (44.67%), Postives = 111/197 (56.35%), Query Frame = 2
Query: 260 MACLAPCGAALGPNLDSYHSAFGVLEYAHPLVLSLNGNTILTTDWWVPPLFAFAAVAIGGLYLTGDHLLDTPAPWRRPSWPAVCACIALFSSQYYASGLMTVLHVPPVPLAAALAAAAVAGSVAFDCTAVGLTVAAVTALLGPLVEATI------INGTHLYRYIDVDGSGGLVLGCAPWIPLVYFLGGPAVGNLAR 832
+A +A CGAALGP LD YHSAFGVL+Y +P+ + L G L TDWWVPP+F+ AAV + Y D L R PS P + +CIA F QY++SGL+ + +LA AVA FD T GL +A VT + GPLVE + + G+ LY Y D +G + L WI VY G PAVGNL R
Sbjct: 40 LAAMAGCGAALGPCLDGYHSAFGVLKYTNPIPIGLGGVKFLETDWWVPPMFSLAAVILAVSYPVLDSLFGVEVAKRSPSGPWILSCIAYFCFQYWSSGLLFSQGASLPTINLSLAVTAVACVALFDRTPTGLVMAIVTGVAGPLVELGLLLGWPEVTGSKLYSYSQPDFAGAIPL----WIAWVYACGAPAVGNLGR 232
BLAST of mRNA_P-wetherbeei_contig1891.2.1 vs. uniprot
Match: A0A7S4MFY6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MFY6_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.660e-39 Identity = 91/203 (44.83%), Postives = 115/203 (56.65%), Query Frame = 2
Query: 263 ACLAPCGAALGPNLDSYHSAFGVLEYAHPLVLSLNG---NTILTTDWWVPPLFAFAAVAIGGLYLTGDHLLDTPAPWRRPSWPAVCACIALFSSQYYASGLMTVLHVPPVPLAAALAAAAVAGSVAFDCTAVGLTVAAVTALLGPLVEATIIN---GTHLYRYIDVDGSGGLVLGCAPWIPLVYFLGGPAVGNLARAFYSTFS 853
A +A CGAALGP LDSYHS+FGVL+Y P+ + L G N L T WWVPPLF A IG LY+ D L+T PS P + I++F+ QY+ SG+M V + ++ A G V FD T GL +A TA+ GPL+E +I+ G Y Y D +G L WI VYFLGGPAVGNLAR ++ S
Sbjct: 121 ALMALCGAALGPFLDSYHSSFGVLQYDAPIYVPLWGTAENPALITSWWVPPLFGLAGFIIGWLYILLDSGLETDGRRMAPSPPEILTGISVFTLQYWLSGVMNASGVGREVILGVMSVVAALGFVVFDSTTAGLLTSAATAVGGPLIEVGLISTLQGHGGYHYTDAGETGFFPL----WIVPVYFLGGPAVGNLARGIWNKLS 319
BLAST of mRNA_P-wetherbeei_contig1891.2.1 vs. uniprot
Match: A0A6U3VB03_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VB03_9STRA) HSP 1 Score: 144 bits (362), Expect = 4.820e-36 Identity = 84/202 (41.58%), Postives = 111/202 (54.95%), Query Frame = 2
Query: 278 CGAALGPNLDSYHSAFGVLEYAHPLVLSLNGNT----ILTTDWWVPPLFAFAAVAIGGLYLTGDHLLDTPAPWRRPSWPAVCACIALFSSQYYASGLMTVLHVPPVPLAAALAAAAVAGSVAFDCTAVGLTVAAVTALLGPLVEA---TIINGTHLYRYIDVDGSGGLVLGCAPWIPLVYFLGGPAVGNLARAFYSTFSASM 862
CGA LGP LDSYHSAFGVL+Y P+ L G+ L T WWVP LF A IG LY+ D L+T + PS P + I+ F+ QY+ SG+M + + A +V G + FD T GL + TA+ GPL+EA T + G+ Y Y D+ +G L WI VYFLGGPAVGNL+R ++ + +
Sbjct: 128 CGAGLGPFLDSYHSAFGVLKYDKPITFQLWGSDPTHPALITAWWVPELFGLAGFIIGWLYILLDEGLETANDKKIPSPPEILVGISFFTLQYWLSGIMYASGYDRTAIFGVMTALSVGGYIKFDSTKAGLITSLATAVGGPLIEAGLITFLAGSGGYHYTDLGETGYFPL----WITPVYFLGGPAVGNLSRGIWNALTTKL 325
BLAST of mRNA_P-wetherbeei_contig1891.2.1 vs. uniprot
Match: B7GDH6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GDH6_PHATC) HSP 1 Score: 140 bits (354), Expect = 4.450e-35 Identity = 86/199 (43.22%), Postives = 114/199 (57.29%), Query Frame = 2
Query: 281 GAALGPNLDSYHSAFGVLEYAHPLVLSLNGNT---ILTTDWWVPPLFAFAAVAIGGLYLTGDHLLDTPAPWR-RPSWPAVCACIALFSSQYYASGLMTVLHVPPVPLAAALAAAAVAGSVAFDCTAVGLTVAAVTALLGPLVEATIINGTHL-------YRYIDVDGSGGLVLGCAPWIPLVYFLGGPAVGNLARAFYS 844
G LGP LD+YHSAFGVLEY P+ L G+ LTT WWVP LF A IG LY+ GD +L + +P RPS P + I+LF+ QY+ SG M V V + ++ A +G + D T VG V+AVTA GP++E +++ + Y+Y D+ +G L WI VYFLGGPAVGNLAR ++
Sbjct: 99 GVILGPFLDAYHSAFGVLEYDKPITSILWGSVDHPALTTTWWVPALFGLAGFLIGWLYILGDVILSSSSPNNPRPSPPQILLGISLFTLQYWLSGAMYHSGVDRVVILNTMSIVAASGFILLDQTFVGFLVSAVTAFGGPMIEVGLLSLSRADLMLESGYQYTDIGETGFFPL----WILPVYFLGGPAVGNLARGIWN 293
BLAST of mRNA_P-wetherbeei_contig1891.2.1 vs. uniprot
Match: B8BSU2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSU2_THAPS) HSP 1 Score: 136 bits (343), Expect = 2.490e-34 Identity = 87/216 (40.28%), Postives = 114/216 (52.78%), Query Frame = 2
Query: 278 CGAALGPNLDSYHSAFGVLEYAHPLVLSLNGNTILTTDWWVPPLFAFAAVAIGGLYLTGDHLLDTPAPWRRPSWPAVCACIALFSSQYYASGLMTVLHVPPVPLAAALAAAAVAGSVAFDCTAVGLTVAAVTALLGPLVEATIIN---GTHLYRYIDVDGSGGLVLGCAPWIPLVYFLGGPAVGNLARAFYSTFSASMEAA*PAKDYG*TLAEAAL 916
CGAALGP LDSYHS +GVL Y PLV L T +WVPPLF AA IG LY+ D +L +PS V I+ F+ QY+ SG++ V + ++A A G +A D T G +A TA+ GPL+E +I+ G+ Y Y D +G L WI VYFLGGPA GNLAR+F++ A + G + +A L
Sbjct: 4 CGAALGPFLDSYHSLYGVLTYDTPLVFPLGSYLTCVTTYWVPPLFGVAAFLIGWLYIGLDVVLGDSGQ-MQPSVSKVLIGISYFTFQYWLSGILFAHGVDRASILVLMSALAAGGFLALDGTLSGFITSAATAIGGPLIEVGLISTLPGSWAYHYNDAGETGFFPL----WIVPVYFLGGPANGNLARSFWNALGKDDSAVSESSTMGVVVGDAEL 214
BLAST of mRNA_P-wetherbeei_contig1891.2.1 vs. uniprot
Match: A0A1Z5JJY3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJY3_FISSO) HSP 1 Score: 137 bits (345), Expect = 7.880e-34 Identity = 87/228 (38.16%), Postives = 121/228 (53.07%), Query Frame = 2
Query: 197 IESGKVREVSQFWRRPAFRKSMACLAPCGAALGPNLDSYHSAFGVLEYAHPLVLSL--NGNTILTTDWWVPPLFAFAAVAIGGLYLTGDHLLDTPAPWRRPSWPAVCACIALFSSQYYASGLMTVLHVPPVPLAAALAAAAVAGSVAFDCTAVGLTVAAVTALLGPLVEATIIN-------GTHLYRYIDVDGSGGLVLGCAPWIPLVYFLGGPAVGNLARAFYSTFS 853
++ V+ S F R F M GA LGP LD+YHS FGVL Y HP+ +L + + L T WWVP LF A IG LY+ D L + + +RPS P + I+ F+ QY+ SG++ + V V + ++A A G VA D + GL + TA+ GPL+E +++ G + Y Y D+ +G L WI VYFLGGPA GNLAR ++ S
Sbjct: 72 LQQATVQMTSNFQRSVLFSIGMTL---AGATLGPFLDTYHSTFGVLHYEHPITAALWSSADPALITAWWVPELFGVAGFLIGWLYIGLDAGLSSSS--KRPSVPKILVGISFFTFQYWFSGVLVAMGVDRVTILNIMSAMAAIGFVALDGSLAGLVTSTATAVGGPLIEIGLLSLTRAGMLGENGYAYTDLGETGFFPL----WICPVYFLGGPANGNLARGLWNAIS 290
BLAST of mRNA_P-wetherbeei_contig1891.2.1 vs. uniprot
Match: A0A7S1BTV4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTV4_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.170e-33 Identity = 87/206 (42.23%), Postives = 111/206 (53.88%), Query Frame = 2
Query: 269 LAPCGAALGPNLDSYHSAFGVLEYAHPLV-LSLNGNTILTTDWWVPPLFAFAAVAIGGLYLTGDHLLDTPAPWRR---------PSWPAVCACIALFSSQYYASGLMTVLHVPPVPLAAALAAAAVAGSVAFDCTAVGLTVAAVTALLGPLVEA----TIINGTHLYRYIDVDGSGGLVLGCAPWIPLVYFLGGPAVGNLARAFYS 844
++ CGA LGP LDSYHSAFGVL+Y HPL+ L + + LTT WVPPLF A IG LYL D W P P + A I+LF+ QY+ SG + + + + A ++ A G V FD T GL V+ TA+ GPL+E T++ Y Y D SG G WI VYFLGGPAVGNL+R ++
Sbjct: 134 ISACGAILGPFLDSYHSAFGVLQYDHPLLPLGDDLSGFLTTATWVPPLFGLAGFIIGWLYLLLDLYFSDGGGWISVNADVNKLYPDVPKILAGISLFTFQYWLSGFLFLNGADRLTITAIISVIAAGGFVTFDGTVAGLLVSLATAIGGPLIEYGLIHTLVGTGEGYHYTD---SGEFGWGFPLWIIPVYFLGGPAVGNLSRGIWN 336
BLAST of mRNA_P-wetherbeei_contig1891.2.1 vs. uniprot
Match: A0A1Z5JDD9_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDD9_FISSO) HSP 1 Score: 135 bits (341), Expect = 3.380e-33 Identity = 89/221 (40.27%), Postives = 115/221 (52.04%), Query Frame = 2
Query: 224 SQFWRRPAFRKSMACLAPCGAALGPNLDSYHSAFGVLEYAHPLVLSL----NGNTILTTDWWVPPLFAFAAVAIGGLYLTGDHLLDTPAPWRRPSWPAVCACIALFSSQYYASGLMTVLHVPPVPLAAALAAAAVAGSVAFDCTAVGLTVAAVTALLGPLVEATIIN-------GTHLYRYIDVDGSGGLVLGCAPWIPLVYFLGGPAVGNLARAFYSTFS 853
S F R F M GA LGP LD+YHSAFGVL Y HP+ +L + L T WWVP LF A IG LY+ D L + RPS P + I+LF+ QY+ SG++ + V V + ++ A G VA D T GL + TAL GPL+E +++ G + Y Y D+ +G L WI VYFLGGPA GNLAR ++ S
Sbjct: 86 SNFQRSLLFSIGMTL---AGATLGPFLDTYHSAFGVLHYEHPITAALWSSAEEHPALITAWWVPELFGLAGFLIGWLYIALDAGLSPSS--IRPSVPKILGGISLFTFQYWFSGVLVAMGVDRVTILNIMSTMAAMGFVALDGTLAGLVTSTATALGGPLIEICLLSLSQAGMLGENGYAYTDLGETGFFPL----WICPVYFLGGPANGNLARGLWNAIS 297
BLAST of mRNA_P-wetherbeei_contig1891.2.1 vs. uniprot
Match: L1JGI9_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JGI9_GUITC) HSP 1 Score: 130 bits (326), Expect = 1.390e-32 Identity = 86/213 (40.38%), Postives = 112/213 (52.58%), Query Frame = 2
Query: 248 FRKSMACLAPCGAALGPNLDSYHSAFGVLEYAHPLVLSLNGNTILTTDWWVPPLFAFAAVAIGGLYLTGDHL-----LDTPAPWRRPSWPAVCACIALFSSQYYASGLMTVLHVPPVPLAAALAAAAVAGSVAFDCTAVGLTVAAVTALLGPLVEATIIN------GTHLYRYIDVDGSGGLVLGCAPWIPLVYFLGGPAVGNLARAFYSTFS 853
+R + +A GA LGP LD YHSAFGVL+Y +P +SL G+ + TD+WVP +FA A+V +G Y D + L P P P AC++ F QYY SGL+ V V L +LA +AVA FD T G ++ VT L GPLVE ++ G LY Y D +LG WI VY G PAVG L+R ++ S
Sbjct: 14 WRDHLLAMATYGAMLGPQLDGYHSAFGVLKYTNPKQISLAGHFLFETDYWVPAMFALASVILGISYPILDMIFKEEELSVPTP------PKSLACVSFFCFQYYCSGLLFQQGVEDVSLHLSLAISAVACWWIFDRTRTGAIMSIVTGLCGPLVEVFLLQVWPAWTGQTLYAYSAPD-----MLGIPLWIAWVYGCGAPAVGGLSRLTWNYVS 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1891.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1891.2.1 >prot_P-wetherbeei_contig1891.2.1 ID=prot_P-wetherbeei_contig1891.2.1|Name=mRNA_P-wetherbeei_contig1891.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp MISTLAARRNGTFLHCIAFALCCSWTLGLRVAPSSIESGKVREVSQFWRRback to top mRNA from alignment at P-wetherbeei_contig1891:4185..5372+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1891.2.1 ID=mRNA_P-wetherbeei_contig1891.2.1|Name=mRNA_P-wetherbeei_contig1891.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1188bp|location=Sequence derived from alignment at P-wetherbeei_contig1891:4185..5372+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1891:4185..5372+ >mRNA_P-wetherbeei_contig1891.2.1 ID=mRNA_P-wetherbeei_contig1891.2.1|Name=mRNA_P-wetherbeei_contig1891.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig1891:4185..5372+ (Phaeothamnion wetherbeei SAG_119_79)back to top |