mRNA_P-wetherbeei_contig18856.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A7C4XN79_9HYPH (N-formylglutamate amidohydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XN79_9HYPH) HSP 1 Score: 357 bits (917), Expect = 1.010e-121 Identity = 175/253 (69.17%), Postives = 209/253 (82.61%), Query Frame = 1
Query: 1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
SRLDA ALRKSEDC+VDELF GVA LGAPL++ARFPRAYLDVNREP+ELDP LFG+ LP +AN+QS+RVAGGLGTIARIVADGEEIY P LAAALERIERLY PFHA+L EL+ +T+ARFG+A+L+DCHSMPSA+M+ SGS T+PDFVIGDRFG SCD R +R +R+ + +LGY +NRPYAGG+ITE+YGRP+QG HA+Q+EINR+LYL+E L P RF L DL +L +RLF+ P R AAE
Sbjct: 49 SRLDAHALRKSEDCFVDELFAGVARLGAPLIAARFPRAYLDVNREPYELDPLLFGEPLPPFANTQSMRVAGGLGTIARIVADGEEIYREPPPLAAALERIERLYKPFHASLHELITRTQARFGVALLVDCHSMPSASMSASGS-TKPDFVIGDRFGASCDPRASRAIREAIVQLGYQAHVNRPYAGGYITEHYGRPAQGVHAVQIEINRALYLNETSLQPTARFAKLQNDLTVLVQRLFSGMPPLIERRAAAE 300
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A2W4TRQ2_9PROT (N-formylglutamate amidohydrolase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4TRQ2_9PROT) HSP 1 Score: 344 bits (883), Expect = 1.440e-116 Identity = 169/253 (66.80%), Postives = 203/253 (80.24%), Query Frame = 1
Query: 1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
SRLDA LRKSEDC+VDELF VA LGAPL++ARFPRAYLDVNREP+ELDPELF + LP +AN+Q++RVAGGLGT+ARIVADGEEIY LA A+ERIERLY PFHA++A +L++T+ RFG AIL+DCHSMPSA+M Q G G+RPDFVIGDRFG+SCD ++TRL R+ + + GY VQ+NRPYAGGFITE+YG+P +G HALQ+EINR LYL+E KLT F L DL + R+FAE P R AAE
Sbjct: 48 SRLDAHTLRKSEDCFVDELFADVAKLGAPLIAARFPRAYLDVNREPYELDPELFAEPLPDFANTQTMRVAGGLGTVARIVADGEEIYDRPLPLAVAIERIERLYKPFHASIARILERTRRRFGAAILVDCHSMPSASMNQPG-GSRPDFVIGDRFGSSCDAKVTRLFREVIAQRGYQVQLNRPYAGGFITEHYGQPFKGVHALQIEINRGLYLNEEKLTRTANFDRLRHDLTQMMARIFAELPPLIAPRAAAE 299
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A2W4L0H1_9PROT (N-formylglutamate amidohydrolase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4L0H1_9PROT) HSP 1 Score: 343 bits (879), Expect = 5.830e-116 Identity = 170/253 (67.19%), Postives = 202/253 (79.84%), Query Frame = 1
Query: 1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
SRLDA LRKSEDC+VDELF VA+LGAPL++ARFPRAYLDVNREP+ELDPELF + LP++AN+Q++RVAGGLGT+ARIVADGEEIY L A+ERIERLY PFHA +AELL++T RFG+AIL+DCHSMPSA+M SG RPDFVIGDRFG SCD ++TRL R+ +T GY VQ+NRPYAGGFITE+YGRP +G HALQ+EINR LYL+E KLT F L ++L + R+FAE P R AAE
Sbjct: 48 SRLDAHTLRKSEDCFVDELFGDVASLGAPLIAARFPRAYLDVNREPYELDPELFDEPLPAFANTQTMRVAGGLGTLARIVADGEEIYREPLPLGVAMERIERLYKPFHARIAELLERTHRRFGVAILVDCHSMPSASMNHV-SGGRPDFVIGDRFGASCDAKVTRLFREIITHCGYQVQLNRPYAGGFITEHYGRPFKGIHALQIEINRGLYLNETKLTRTAGFDRLKRNLTQIMARIFAELPPILAPRAAAE 299
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: UPI00036EF11C (N-formylglutamate amidohydrolase n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI00036EF11C) HSP 1 Score: 339 bits (870), Expect = 1.360e-114 Identity = 170/253 (67.19%), Postives = 197/253 (77.87%), Query Frame = 1
Query: 1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
SRLD + LRKSEDC+VDELF+G A LG PL+SA+FPRAYLDVNREP+ELDPELF LP YANSQS+RV GGLGTIARIVADGEEIY T ++ AL RIE+LY PFHA L EL+++T+A+FG AIL+DCHSMPSA MTQS SG RPDFVIGDRFG +CD RLTR +RD + GY VQ+NRPYAGG+ITE+YGRP +G A+QVEINR+LYLDER TP RF L DL + LF+ R AAE
Sbjct: 48 SRLDPLTLRKSEDCFVDELFQGAAELGVPLISAQFPRAYLDVNREPYELDPELFADPLPDYANSQSVRVVGGLGTIARIVADGEEIYRTRLSVDDALGRIEQLYFPFHAALEELIEQTRAQFGYAILVDCHSMPSAQMTQS-SGPRPDFVIGDRFGAACDPRLTRYLRDMLASEGYDVQLNRPYAGGYITEHYGRPYRGVQAVQVEINRALYLDERTFTPSRRFHRLKTDLTRFAAMLFSAIPAMIEQRAAAE 299
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: V5SG31_9HYPH (N-formylglutamate amidohydrolase n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SG31_9HYPH) HSP 1 Score: 334 bits (857), Expect = 1.200e-112 Identity = 167/253 (66.01%), Postives = 197/253 (77.87%), Query Frame = 1
Query: 1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
SRLD M LRKSEDC+VDELFEG AALG PL+SA+FPRAYLDVNREP+ELDPELF LP YANSQS+RV GGLGTIARIVADGEEIY + ++ AL RI+ LY PFH LAEL+ +TKA FG A+LIDCHSMPSA M QS SG RPDFVIGDRFG +CD +LTR +++ +T GY V +NRPYAGG+ITE+YGRP +G HA+Q+EINR+LYL+E + TP FQ L DL ++ LF+ A R AAE
Sbjct: 46 SRLDPMTLRKSEDCFVDELFEGAAALGVPLISAQFPRAYLDVNREPYELDPELFADPLPDYANSQSVRVIGGLGTIARIVADGEEIYASRLSVEQALARIDHLYFPFHGALAELIAETKALFGYAVLIDCHSMPSAQMAQS-SGPRPDFVIGDRFGVACDPKLTRTLKEALTGSGYDVHLNRPYAGGYITEHYGRPLEGVHAVQIEINRALYLNEARFTPGRGFQRLKADLTRIAGTLFSTLPAALEQRAAAE 297
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A2S5P9J8_HYPSQ (N-formylglutamate amidohydrolase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5P9J8_HYPSQ) HSP 1 Score: 329 bits (844), Expect = 1.210e-110 Identity = 167/253 (66.01%), Postives = 196/253 (77.47%), Query Frame = 1
Query: 1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
SRLD +ALRKSED YVDELF VA GAPL++ARFPRAYLD+NRE +ELDPELF LP YAN++S+RV GGLGTIARIVADGEEIY L ALERIE+LY PFHA L LL +T+A+FG +ILIDCHSMPSA+ SG+ RPDFV+GDRFG SCD RLTR RD +T LGY VQ+NRPYAGG+ITE+YGRPS+ HALQ+EINR LYL+E ++P F L + LMIL++RL EF R+AAE
Sbjct: 48 SRLDPLALRKSEDGYVDELFRHVAEFGAPLIAARFPRAYLDLNREAYELDPELFDTPLPDYANTRSVRVVGGLGTIARIVADGEEIYRERMPLGVALERIEQLYLPFHAALTRLLDETRAQFGYSILIDCHSMPSASSMPSGA-RRPDFVLGDRFGASCDSRLTRFTRDVLTGLGYDVQLNRPYAGGYITEHYGRPSRRAHALQIEINRGLYLEEATMSPTAGFVELERHLMILTRRLIKEFPLLIERRSAAE 299
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A7C2R0H7_9HYPH (N-formylglutamate amidohydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2R0H7_9HYPH) HSP 1 Score: 328 bits (840), Expect = 4.910e-110 Identity = 165/253 (65.22%), Postives = 194/253 (76.68%), Query Frame = 1
Query: 1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
SRLDA LRKSEDCYVDELFE V LGAPL++ARFPRAYLDVNREP+ELDPELF +LP +AN+QS RV GGLGTIARIVAD EEIY + AA ERIERLY PFHA LA+LLQ T+ RFGIA+LIDCHSMPSA+ Q+ G RP FV+GDRFG SCD +LTR +RD + +GY VQ+NRPYAGGFITE YG P++G +LQ+EINR LYLDE LT P+F L++ L ++ ++FA R AAE
Sbjct: 48 SRLDAHTLRKSEDCYVDELFEPVVGLGAPLIAARFPRAYLDVNREPYELDPELFTGRLPDFANTQSARVVGGLGTIARIVADTEEIYRERLPVGAAFERIERLYRPFHAALADLLQATRRRFGIAVLIDCHSMPSASSAQAAGG-RPHFVLGDRFGASCDAKLTRFIRDLLQGMGYEVQVNRPYAGGFITEYYGNPARGVQSLQLEINRGLYLDEATLTKGPQFPALARTLAEVAAKVFAALPLLLEKRAAAE 299
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: UPI00093099F3 (N-formylglutamate amidohydrolase n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI00093099F3) HSP 1 Score: 325 bits (834), Expect = 3.870e-109 Identity = 161/253 (63.64%), Postives = 190/253 (75.10%), Query Frame = 1
Query: 1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
SRLD M LRKSEDC+VD+LF G A LG P+++ARFPRAYLDVNREP+ELDPELF LP YANSQS+RV GGLGT+ARIVADGEEIY + AL RIE+LY PFH L L+ +TKARFG AILIDCHSMPSA M QS SG RPDFV+GDRFG +CD LTR +RD + GY VQ+NRPYAGG+ITE+YGRP +G ALQ+EINR+LYLDE++ TP P F+ L D+ + + + R AAE
Sbjct: 47 SRLDPMTLRKSEDCFVDDLFRGAAELGVPMIAARFPRAYLDVNREPYELDPELFADPLPDYANSQSVRVIGGLGTVARIVADGEEIYRERLCVEEALARIEQLYFPFHEALQSLIAETKARFGYAILIDCHSMPSAQMAQS-SGPRPDFVLGDRFGAACDPELTRFLRDTLAAEGYDVQLNRPYAGGYITEHYGRPYRGVQALQIEINRALYLDEQRFTPSPGFERLKTDITRIVNMMLSTVPGLLAKRDAAE 298
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A2S5N035_HYPSQ (N-formylglutamate amidohydrolase n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A2S5N035_HYPSQ) HSP 1 Score: 325 bits (832), Expect = 8.070e-109 Identity = 163/253 (64.43%), Postives = 195/253 (77.08%), Query Frame = 1
Query: 1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
SRLDA ALR+SEDCYVDELF A+ GA LLSARFPRAY+D NREP+ELDPELF + LP +AN++S+RVAGGLGTIARIVADGEEIY L AL RIE LY PFHA L L+++ + FG AILIDCHSMPSA M + S RPDFVIGDRFGTSCDLRLT+ +R +T LGY Q+NRPYAGG+ITE+YGRP + HA+Q+EINR LY++E+ L PRF L +DL++ +K+LFAE R+AAE
Sbjct: 48 SRLDATALRRSEDCYVDELFIRGASRGATLLSARFPRAYIDANREPYELDPELFSEPLPDWANARSVRVAGGLGTIARIVADGEEIYQEPLALQDALTRIELLYKPFHAALRSLIERAQRNFGYAILIDCHSMPSAHMAHA-SIQRPDFVIGDRFGTSCDLRLTKFIRSVLTDLGYEAQLNRPYAGGYITEHYGRPLRNVHAIQLEINRGLYMNEKTLEKTPRFIALERDLLLFAKQLFAEVPALLERRSAAE 299
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A1E4CW56_9HYPH (N-formylglutamate amidohydrolase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4CW56_9HYPH) HSP 1 Score: 322 bits (825), Expect = 9.330e-108 Identity = 163/253 (64.43%), Postives = 193/253 (76.28%), Query Frame = 1
Query: 1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
SRL A +LRKSEDCYVD+LF GVAALGAPL++ARFPRAY+DVNREP+ELDPELF + LP++ANS+SIRVAGGLGTIAR+VAD EEIY L ALERIERLY PFH LA L+ T RFG A+LIDCHSMPS++ G RPDFV+GDRFG SCD RLTR +R+++T LGY V +NRPYAGG+ITE YGRP +G HALQ+EINR+LYL+ER P F ++ + L + RLF E R AAE
Sbjct: 48 SRLTASSLRKSEDCYVDDLFAGVAALGAPLIAARFPRAYVDVNREPYELDPELFEETLPAFANSRSIRVAGGLGTIARVVADAEEIYKGRLPLTVALERIERLYKPFHGALASLIDATARRFGAAMLIDCHSMPSSSTGYVGP-QRPDFVLGDRFGASCDGRLTRFLREELTALGYTVHLNRPYAGGYITEYYGRPQRGLHALQIEINRALYLNERTFEKKPGFAVVERHLRTVVARLFNELPGMLGGREAAE 299 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18856.1.1 >prot_P-wetherbeei_contig18856.1.1 ID=prot_P-wetherbeei_contig18856.1.1|Name=mRNA_P-wetherbeei_contig18856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=249bp MALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGback to top mRNA from alignment at P-wetherbeei_contig18856:561..1322- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18856.1.1 ID=mRNA_P-wetherbeei_contig18856.1.1|Name=mRNA_P-wetherbeei_contig18856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig18856:561..1322- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18856:561..1322- >mRNA_P-wetherbeei_contig18856.1.1 ID=mRNA_P-wetherbeei_contig18856.1.1|Name=mRNA_P-wetherbeei_contig18856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=747bp|location=Sequence derived from alignment at P-wetherbeei_contig18856:561..1322- (Phaeothamnion wetherbeei SAG_119_79)back to top |