mRNA_P-wetherbeei_contig18850.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18850.2.1 vs. uniprot
Match: A0A6H5JW07_9PHAE (UTP15_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JW07_9PHAE) HSP 1 Score: 322 bits (824), Expect = 1.940e-104 Identity = 159/259 (61.39%), Postives = 191/259 (73.75%), Query Frame = 1
Query: 10 YKRLGMKQYPRLQERETPEARYWRRFTKPVVTVHPAPVTCIDFSPVAPHDFAVTCSTHVAIHDGREGKEVRSIGRFGDVACCARYRGDGKLLATGDKTGAVKAIEAQSKTVLRTFSEHTAAVHAVGWACDNLRMGSASDDATVRLWDLPTAMAIGTRRGHADYVRALAPSASNAELWASGSYDRTARLWDVRQPGAAALTLQHDAPVEALLFLPGGTLLLGAGGNELR--VWDLLAGG--RLLHTVCNHQKTVTCLALD 774
YKRL +K++PR+QERET EARYWR FT P V H APV+CI FS APHDFAVTCSTHV++H G+++RS+GRF VA A+ R DGKL+ TGD TG V I+ ++K +LR F EH A V W+CD L++ S SDD T+RLWDLPT+ A+ R+GHADYVRALA S S+ + W SGSYD T ++WD RQP L L H APVEA LFLPGG L + AGGNE++ VWDLL GG RLLHT+ NHQKTVTCLALD
Sbjct: 5 YKRLTIKRFPRVQERETAEARYWRNFTNPEVQTHNAPVSCIHFSATAPHDFAVTCSTHVSLHAAVTGRQIRSVGRFDHVAYSAQLRSDGKLMGTGDHTGTV--IDVKTKGILRAFREHKAPTRVVRWSCDGLQLASGSDDKTLRLWDLPTSTAVQVRQGHADYVRALAASPSSPDTWISGSYDHTVKMWDTRQPKRNVLELSHGAPVEACLFLPGGGLCVSAGGNEVKASVWDLLGGGGGRLLHTLANHQKTVTCLALD 261
BLAST of mRNA_P-wetherbeei_contig18850.2.1 vs. uniprot
Match: A0A835Z7W5_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W5_9STRA) HSP 1 Score: 293 bits (750), Expect = 1.960e-93 Identity = 137/256 (53.52%), Postives = 187/256 (73.05%), Query Frame = 1
Query: 7 DYKRLGMKQYPRLQERETPEARYWRRFTKPVVTVHPAPVTCIDFSPVAPHDFAVTCSTHVAIHDGREGKEVRSIGRFGDVACCARYRGDGKLLATGDKTGAVKAIEAQSKTVLRTFSEHTAAVHAVGWACDNLRMGSASDDATVRLWDLPTAMAIGTRRGHADYVRALAPSASNAELWASGSYDRTARLWDVRQPGAAALTLQHDAPVEALLFLPGGTLLLGAGGNELRVWDLLAGGRLLHTVCNHQKTVTCLALD 774
++KRL +KQ+P++QE++TPEA+YWR+F+ PVV H A T + +SP AP+D AV+C +HV+I G G ++R+I RF VA +RGDG+L+A GD G+V +A SK +LRTF+ H AAV AV W+ D LR+ SASDD +VRLWDLPT +G R GH DYVRA+ SA++A+ W +G YD T RLWD R GA + ++H APVEA+L LPGG+L+ AGGN L++WD + GG+L+H +HQKT+TCLAL+
Sbjct: 4 EFKRLALKQFPQIQEKDTPEAKYWRKFSGPVVETHDAHCTSLHYSPAAPYDLAVSCGSHVSIRSGATGAKLRAISRFQGVAYSGVFRGDGRLIAGGDAKGSVIVADATSKAMLRTFAGHAAAVRAVRWSADGLRLASASDDKSVRLWDLPTGAHVGMREGHTDYVRAMDASAASADAWVTGGYDGTVRLWDARAAGAVRV-MEHGAPVEAVLCLPGGSLVASAGGNVLKIWDAMGGGKLVHECSHHQKTITCLALN 258
BLAST of mRNA_P-wetherbeei_contig18850.2.1 vs. uniprot
Match: A0A1X2H797_SYNRA (WD40-repeat-containing domain protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H797_SYNRA) HSP 1 Score: 246 bits (629), Expect = 2.880e-75 Identity = 120/256 (46.88%), Postives = 167/256 (65.23%), Query Frame = 1
Query: 7 DYKRLGMKQYPRLQERETPEARYWRRFTKPVVTVHPAPVTCIDFSPVAPHDFAVTCSTHVAIHDGREGKEVRSIGRFGDVACCARYRGDGKLLATGDKTGAVKAIEAQSKTVLRTFSEHTAAVHAVGWACDNLRMGSASDDATVRLWDLPTAMAIGTRRGHADYVRALAPSASNAELWASGSYDRTARLWDVRQPGAAALTLQHDAPVEALLFLPGGTLLLGAGGNELRVWDLLAGGRLLHTVCNHQKTVTCLALD 774
DY+RL +KQ RL RETPE +YW++F P++ V+ + FSPVAP+DFA+ ST V I+ + + ++I RF D+A A +R DGKL+ GD+TG V+ + S+ +LRTF EHT V ++ +N ++ +ASDD TVRLWD+P +I H DYVRA S N + +GSYD+T ++WD RQ G +T+QHDAPVE++L PGG ++ AGG ++VWDLL+GGR +H V N QKTVT L D
Sbjct: 2 DYRRLAVKQQARLPSRETPEGKYWKKFKSPILIKEYGAVSSVYFSPVAPYDFAIASSTRVQIYSSKTHQPKKTISRFKDIAYSASFRQDGKLVVAGDETGLVQVFDVNSRAILRTFREHTLPVRVTKFSSENTQIMTASDDRTVRLWDIPAEKSIHVFEDHQDYVRAGVVSQDNPHMLVTGSYDQTIKIWDTRQNGCV-MTMQHDAPVESVLMYPGGGAVVSAGGPGIKVWDLLSGGRCMHAVSNQQKTVTSLCFD 256
BLAST of mRNA_P-wetherbeei_contig18850.2.1 vs. uniprot
Match: A0A0D2UI43_CAPO3 (U3 small nucleolar RNA-associated protein 15 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UI43_CAPO3) HSP 1 Score: 246 bits (627), Expect = 6.620e-75 Identity = 121/249 (48.59%), Postives = 163/249 (65.46%), Query Frame = 1
Query: 28 KQYPRLQERETPEARYWRRFTKPVVTVHPAPVTCIDFSPVAPHDFAVTCSTHVAIHDGREGKEVRSIGRFGDVACCARYRGDGKLLATGDKTGAVKAIEAQSKTVLRTFSEHTAAVHAVGWACDNLRMGSASDDATVRLWDLPTAMAIGTRRGHADYVRALAPSASNAELWASGSYDRTARLWDVRQPGAAALTLQHDAPVEALLFLPGGTLLLGAGGNELRVWDLLAGGRLLHTVCNHQKTVTCLALD 774
KQYPRL RET E+RYW+RF PVV + V+ I FSP AP DFAVT ST + I+ + +++ RF DVA C +R DGKLL GD++G V+ ++ S++VLRTF+ H AVH +A D+ ++ SA DDA VR WD+P + GH DY+RA S +++W +G YD +LWD R G+ +++ H APVE +LF PGG L L AG N+++VWD+LAGGRLL T NHQKT+T + LD
Sbjct: 40 KQYPRLARRETSESRYWKRFKFPVVVKEYSAVSHIHFSPTAPWDFAVTSSTRIQIYSKKSNTVKKTLSRFKDVAYCGTFRRDGKLLVAGDESGLVQLLDPNSRSVLRTFAGHQRAVHVTRFATDDNQIMSAGDDAVVRCWDIPAERQVLALTGHTDYIRAGVVSPVASDVWLTGGYDHMVKLWDTRA-GSCTMSMNHGAPVEQILFFPGGGLALSAGSNQIKVWDVLAGGRLLQTFSNHQKTITSMCLD 287
BLAST of mRNA_P-wetherbeei_contig18850.2.1 vs. uniprot
Match: A0A1V9YVE1_9STRA (U3 small nucleolar RNA-associated protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YVE1_9STRA) HSP 1 Score: 245 bits (625), Expect = 7.860e-75 Identity = 120/260 (46.15%), Postives = 167/260 (64.23%), Query Frame = 1
Query: 7 DYKRLGMKQYPRLQERETPEARYWRRFTKPVVTVHPAPVTCIDFSPVAPHDFAVTCSTHVAIHDGREGKEVRSIGRFGDVACCARYRGDGKLLATGDKTGAVKAIEAQSKTVLRTFSEHTAAVHAVGWACDNLRMGSASDDATVRLWDLPTAMAIGTRRGHADYVRALAPSASNAELWASGSYDRTARLWDVRQPGAAA----LTLQHDAPVEALLFLPGGTLLLGAGGNELRVWDLLAGGRLLHTVCNHQKTVTCLALD 774
D+ +L +KQ+P+ + PE YW + P A VTCID +PVAP+DFA ST V ++ ++ RF DV A +RGDGKLL TG+ G V ++ S+TVLR H AV A ++ D++ + SASDD T RLWDL T + GH DYVRA+A +++ +WA+GSYD T +LWD+R G+A+ +++ H APVEA+L LPGG L + AGG +++VWDLL+GG+LLH+ +HQKTVTCL+LD
Sbjct: 2 DFHKLSLKQFPQATKHVAPEKSYWLKLRAPHELPQVAAVTCIDANPVAPYDFAAATSTRVQLYSTTSNDIKKTFSRFHDVVYSAAFRGDGKLLVTGNANGQVAVLDVASRTVLRNLHGHKGAVRAAKFSNDHVHIFSASDDKTCRLWDLATGSPVAVMGGHTDYVRAVAAHPASSSMWATGSYDHTVKLWDMRNAGSASTKATMSMDHGAPVEAVLMLPGGNLAISAGGTDIKVWDLLSGGKLLHSFSSHQKTVTCLSLD 261
BLAST of mRNA_P-wetherbeei_contig18850.2.1 vs. uniprot
Match: A0A1X2II15_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2II15_9FUNG) HSP 1 Score: 244 bits (622), Expect = 8.000e-74 Identity = 119/256 (46.48%), Postives = 170/256 (66.41%), Query Frame = 1
Query: 7 DYKRLGMKQYPRLQERETPEARYWRRFTKPVVTVHPAPVTCIDFSPVAPHDFAVTCSTHVAIHDGREGKEVRSIGRFGDVACCARYRGDGKLLATGDKTGAVKAIEAQSKTVLRTFSEHTAAVHAVGWACDNLRMGSASDDATVRLWDLPTAMAIGTRRGHADYVRALAPSASNAELWASGSYDRTARLWDVRQPGAAALTLQHDAPVEALLFLPGGTLLLGAGGNELRVWDLLAGGRLLHTVCNHQKTVTCLALD 774
DY+++ +K+YP++ +++ E +YW+RF P++ A + I FSPVAPHDFA+ ST V I+ + + ++I RF D+A A +R DGKLL GD TG V+ + S+ +LRTF EH+ VH ++ + + SASDD TVR+WD+PT ++ GH DYVR+ S N L +G+YD+T +LWD+RQ +T+QH APVE+LL PGG ++ AGG L+VWDLL+GGR LHT+ NHQKTVT LA +
Sbjct: 2 DYQKIVVKKYPKVPSKQSGEGKYWKRFKSPILIKEYASIPSIYFSPVAPHDFALASSTRVQIYSSKTHQPKKTISRFKDLAYSACFRHDGKLLVAGDATGLVQLFDVNSRAILRTFREHSMPVHVTKFSNNKTNIMSASDDKTVRIWDIPTETSVNVFEGHDDYVRSGVVSDDNPNLVLTGAYDQTVKLWDMRQ-NECVMTIQHGAPVESLLMYPGGGAIVSAGGPTLKVWDLLSGGRCLHTLSNHQKTVTSLAFN 256
BLAST of mRNA_P-wetherbeei_contig18850.2.1 vs. uniprot
Match: A0A067CFM1_SAPPC (UTP15_C domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFM1_SAPPC) HSP 1 Score: 239 bits (609), Expect = 1.960e-72 Identity = 119/257 (46.30%), Postives = 159/257 (61.87%), Query Frame = 1
Query: 7 DYKRLGMKQYPRLQERETPEARYWRRFTKPVVTVHPAPVTCIDFSPVAPHDFAVTCSTHVAIHDGREGKEVRSIGRFGDVACCARYRGDGKLLATGDKTGAVKAIEAQSKTVLRTFSEHTAAVHAVGWACDNLRMGSASDDATVRLWDLPTAMAIGTRRGHADYVRALAPSASNAELWASGSYDRTARLWDVRQPGA-AALTLQHDAPVEALLFLPGGTLLLGAGGNELRVWDLLAGGRLLHTVCNHQKTVTCLALD 774
++K+L +K +P ++ +PE YW + P A VTCID SPVAP DFA ST V ++ ++ RF DV A +RGDGKLL TG+ V ++ S+TVLR + H AV A ++ DN+ + SASDD T RLWDL T + H DYVR AP +++ +WAS SYD T +LWD R A + L++ H +PVEA + LPGG LL+ AG NE++VWDLL GG+LLH+ HQKT+TCLALD
Sbjct: 2 EFKKLPLKHFPTATKQSSPEKTYWTKLRAPTELPQVAAVTCIDASPVAPFDFAAATSTRVQLYSTSNNDVKKTFSRFHDVVYSAAFRGDGKLLVTGNANSQVAVLDVGSRTVLRNLNGHKGAVRAAKFSNDNVHIFSASDDKTCRLWDLATGSPVAVYGEHTDYVRVCAPHPTSSNVWASASYDHTVKLWDTRSATAKSTLSMDHGSPVEACVMLPGGNLLISAGSNEIKVWDLLTGGKLLHSFSAHQKTITCLALD 258
BLAST of mRNA_P-wetherbeei_contig18850.2.1 vs. uniprot
Match: A0A484EDC8_BRELC (UTP15_C domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDC8_BRELC) HSP 1 Score: 236 bits (602), Expect = 2.320e-71 Identity = 113/261 (43.30%), Postives = 166/261 (63.60%), Query Frame = 1
Query: 4 GDYKRLGMKQYPRLQERETPEARYWRRFTKPVVTVHPAPVTCIDFSPVAPHDFAVTCSTHVAIHDGREGKEVRSIGRFGDVACCARYRGDGKLLATGDKTGAVKAIEAQSKTVLRTFSEHTAAVHAVGWACDNLRMGSASDDATVRLWDLPTAMAIGTRRGHADYVRALAPSASNAELWASGSYDRTARLWDVRQP----GAAALTLQHDAPVEALLFLPGGTLLLGAGGNELRVWDLLAGGRLLHTVCNHQKTVTCLALD 774
GDYKRL +K++P E +T E YW++F P PVT ID SPV PH A+T ST + ++ + +++ RF DV +R DGKLL G + V+ ++ +++ +LR+F HTAA + ++ DN+ + S SDD T R WDLPT + H+DYVR+ + S+ +WA+GSYD T +LWD+R ++++L H APVEA + +PGG+LLL AGGN ++VWD+L+GGR+LH+ +HQKT+TCL LD
Sbjct: 5 GDYKRLVLKKFPATIEVDTCEDSYWKKFYAPQELQQVGPVTHIDVSPVTPHHVAITSSTRIHLYSTTTNEIIKTFSRFRDVVYSGTFRSDGKLLVAGGEASHVQVLDIKTRAILRSFKGHTAATRSTRFSSDNVHVLSCSDDKTARYWDLPTGKPLALLGEHSDYVRSSGANPSSHNIWATGSYDHTVKLWDLRTSDQTVSKSSMSLNHGAPVEACMIMPGGSLLLSAGGNSIKVWDILSGGRILHSFSSHQKTITCLGLD 265
BLAST of mRNA_P-wetherbeei_contig18850.2.1 vs. uniprot
Match: A0A5D6XGD7_9STRA (UTP15_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGD7_9STRA) HSP 1 Score: 234 bits (597), Expect = 1.480e-70 Identity = 116/260 (44.62%), Postives = 162/260 (62.31%), Query Frame = 1
Query: 7 DYKRLGMKQYPRLQERETPEARYWRRFTKPVVTVHPAPVTCIDFSPVAPHDFAVTCSTHVAIHDGREGKEVRSIGRFGDVACCARYRGDGKLLATGDKTGAVKAIEAQSKTVLRTFSEHTAAVHAVGWACDNLRMGSASDDATVRLWDLPTAMAIGTRRGHADYVRALAPSASNAELWASGSYDRTARLWDVRQP----GAAALTLQHDAPVEALLFLPGGTLLLGAGGNELRVWDLLAGGRLLHTVCNHQKTVTCLALD 774
++KRL +KQ+P E ET E YW++F P PVT ID SPVAPH A+T ST + ++ + ++ RF DV +R DG+LL G + V+ ++ ++ +LRTF HTAAV + ++ DN+ + S SDD T R WDLPT + H DYVR+ A S S+ +WA+GSYD T +LWD+R A+ ++L H APVEA L +PGG LL+ AGGN ++VWD+L+GGRLLH +HQKT+T + LD
Sbjct: 6 EFKRLVLKQFPPTTEVETAENAYWKKFQAPQELQQLGPVTHIDVSPVAPHAVAITTSTRIHLYSTATNEVTKTFSRFRDVVYSGTFRSDGRLLVAGGEAPVVQVLDIGTRAILRTFKGHTAAVRSTRFSSDNVHVLSCSDDKTARYWDLPTGKPVALLGAHKDYVRSSAASPSSQHIWATGSYDHTVKLWDLRAADQSVAASTMSLNHGAPVEATLIMPGGGLLMSAGGNVVKVWDILSGGRLLHAFSSHQKTITSIGLD 265
BLAST of mRNA_P-wetherbeei_contig18850.2.1 vs. uniprot
Match: B3S863_TRIAD (U3 small nucleolar RNA-associated protein 15 homolog n=2 Tax=Trichoplax TaxID=10227 RepID=B3S863_TRIAD) HSP 1 Score: 234 bits (596), Expect = 1.610e-70 Identity = 113/258 (43.80%), Postives = 161/258 (62.40%), Query Frame = 1
Query: 1 MGDYKRLGMKQYPRLQERETPEARYWRRFTKPVVTVHPAPVTCIDFSPVAPHDFAVTCSTHVAIHDGREGKEVRSIGRFGDVACCARYRGDGKLLATGDKTGAVKAIEAQSKTVLRTFSEHTAAVHAVGWACDNLRMGSASDDATVRLWDLPTAMAIGTRRGHADYVRALAPSASNAELWASGSYDRTARLWDVRQPGAAALTLQHDAPVEALLFLPGGTLLLGAGGNELRVWDLLAGGRLLHTVCNHQKTVTCLALD 774
M D+KR+ +K++ + E+ E+ YW + P+V + ++CIDFSPV PH +AVTCS V ++D + ++I RF D A C +R DGKL+ G G V+ + S+TVLR H A H +A +NL + SASDD VR WDLPT + H DY+RA S ++++W +GSYD T +LWD R+ +++T+ H APVEA+L P G++ + AG N ++VWDL+ GGRLL V NHQKT+TCL LD
Sbjct: 1 MADFKRIPIKKFSKANVEESSESSYWMGYKFPIVAKEHSAISCIDFSPVLPHHYAVTCSAKVQLYDCASNQVYKAISRFHDSALCGTFRYDGKLITAGSGDGLVQVFDTHSRTVLRQLHGHKRAAHVARFAMNNLHIISASDDKLVRCWDLPTGKEVAIFDEHTDYIRAGDVSRVSSDVWVTGSYDHTLKLWD-RRTDKSSMTIDHGAPVEAVLIYPSGSICISAGSNYIKVWDLIGGGRLLMGVTNHQKTITCLCLD 257 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18850.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18850.2.1 >prot_P-wetherbeei_contig18850.2.1 ID=prot_P-wetherbeei_contig18850.2.1|Name=mRNA_P-wetherbeei_contig18850.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=258bp MGDYKRLGMKQYPRLQERETPEARYWRRFTKPVVTVHPAPVTCIDFSPVAback to top mRNA from alignment at P-wetherbeei_contig18850:545..1318+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18850.2.1 ID=mRNA_P-wetherbeei_contig18850.2.1|Name=mRNA_P-wetherbeei_contig18850.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig18850:545..1318+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18850:545..1318+ >mRNA_P-wetherbeei_contig18850.2.1 ID=mRNA_P-wetherbeei_contig18850.2.1|Name=mRNA_P-wetherbeei_contig18850.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig18850:545..1318+ (Phaeothamnion wetherbeei SAG_119_79)back to top |