prot_P-wetherbeei_contig18695.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18695.1.1
Unique Nameprot_P-wetherbeei_contig18695.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length195
Homology
BLAST of mRNA_P-wetherbeei_contig18695.1.1 vs. uniprot
Match: A0A6H5KBP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP8_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 1.410e-50
Identity = 96/200 (48.00%), Postives = 130/200 (65.00%), Query Frame = 0
Query:    1 LDPAAEEIFYGERVPFEALGLGPELCMRLSELGLETSTAVQATAVPRILAGKDVVIGAETGSGKTLAYLMPLLQRLLLARDAPEPTPEPPEELLGGAQAWCLFPDAIVLLPNRELCEQVVAVANSLL----AGGVXXXXXXXXXXXXXDRSSRVVTAAAAYGG-LGWPYGPGRPAPTLLVCTPQLLDGYGSLKNIPPFVK 195
            +DP AE IF+G+RVPF  LGL P LC  L  LG+  STAVQA AVP IL+G+D+++GAETGSGKTLAYL+P+++R+L  +   +   + P+ELLG A+ W +FPD +VL+PN+ELC+QV +V   +L    A G+                   VTAAA YG    +P+ P +PAP++LVCTP  L  Y ++K IP F K
Sbjct:    6 VDPEAEAIFFGDRVPFSDLGLSPALCSHLEALGIGDSTAVQAAAVPGILSGEDMIVGAETGSGKTLAYLLPIVERVLRGQAVAK---DLPDELLGNARGWPMFPDVVVLVPNKELCDQVHSVLKGILKALNADGITG-----------------VTAAAKYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCK 185          
BLAST of mRNA_P-wetherbeei_contig18695.1.1 vs. uniprot
Match: D7FR69_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR69_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 9.040e-49
Identity = 96/200 (48.00%), Postives = 130/200 (65.00%), Query Frame = 0
Query:    1 LDPAAEEIFYGERVPFEALGLGPELCMRLSELGLETSTAVQATAVPRILAGKDVVIGAETGSGKTLAYLMPLLQRLLLARDAPEPTPEPPEELLGGAQAWCLFPDAIVLLPNRELCEQVVAVANSLL----AGGVXXXXXXXXXXXXXDRSSRVVTAAAAYGG-LGWPYGPGRPAPTLLVCTPQLLDGYGSLKNIPPFVK 195
            +DP AE IF+G+RVPF  LGL P LC  L  LG+  STAVQA AVP IL+G+D+++GAETGSGKTLAYL+P+++R+L  +   +   + P+ELLG A+ W +FPD +VL+PN+ELC+QV +V   +L    A G+                   VTAAA YG    +P+ P +PAP++LVCTP  L  Y ++K IP F K
Sbjct:  206 VDPEAEAIFFGDRVPFSDLGLSPALCGHLEALGIGGSTAVQAAAVPGILSGEDMIVGAETGSGKTLAYLLPIVERVLRGQAVAK---DLPDELLGNARGWPMFPDVVVLVPNKELCDQVHSVLKGILKALNADGITG-----------------VTAAAKYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCK 385          
BLAST of mRNA_P-wetherbeei_contig18695.1.1 vs. uniprot
Match: A0A836CM84_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM84_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.860e-36
Identity = 85/166 (51.20%), Postives = 104/166 (62.65%), Query Frame = 0
Query:   33 GLETSTAVQATAVPRILAGKDVVIGAETGSGKTLAYLMPLLQRLLLARDAPEPTPEPPEELLGGAQAWCLFPDAIVLLPNRELCEQVVAVANSLLA--GGVXXXXXXXXXXXXXDRSSRVVTAAAAYGG-LGWPYGPGRPAPTLLVCTPQLLDGYGSLKNIPPFVK 195
            G   STA+QA A+P ILA KDVVIGAETGSGKTLAYL+PL+  L+  R   +P+PE    LLG A++W +FPDAI+L PNRELCEQV  VA  LL   G               +  + +    A YG    +PY   RPAP LLVCTP  L GYG+L++IP FV+
Sbjct:    5 GSPCSTAIQAMAIPEILARKDVVIGAETGSGKTLAYLLPLMHDLM-TRTLEDPSPE----LLGNARSWGMFPDAIILTPNRELCEQVRGVAAQLLEELGNPLRGEERAHEAAVLNTHTSI---EALYGASFDYPYSEARPAPQLLVCTPAFLAGYGALRSIPLFVR 162          
BLAST of mRNA_P-wetherbeei_contig18695.1.1 vs. uniprot
Match: A0A0G4ESI9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESI9_VITBC)

HSP 1 Score: 131 bits (329), Expect = 2.180e-32
Identity = 79/195 (40.51%), Postives = 106/195 (54.36%), Query Frame = 0
Query:    2 DPAAEEIFYGERVPFEALGLGPELCMRLSELGLETSTAVQATAVPRILAGKDVVIGAETGSGKTLAYLMPLLQRLLLARDAPEPTPEPPEELLGGAQAWCLFPDAIVLLPNRELCEQVVAVANSLLAGGVXXXXXXXXXXXXXDRSSRVVTAAAAYGGLGWPYGPGRPAPTLLVCTPQLLDGY---GSLKNIPPF 193
            D  + + FYGE VPF +L L P L  +LS+ G +T+T +QA  +P IL G DV++GAETGSGKTLAYL+PLL RLL   +  E   E  +   G      ++P A+V++PNRELC+QV   A  L                   R   V T     G   WP+ P +PAP +L+CTP  L  +   G +K+I  F
Sbjct:   50 DETSLDAFYGEYVPFSSLRLHPSLVQQLSQTGKDTATLIQALGIPSILTGDDVIVGAETGSGKTLAYLVPLLDRLLRENER-EGEAEASDGSGGNTDRSRMYPRAVVMVPNRELCDQVYRWAQELA------------------RPLGVTTEMVWGGYESWPFTPAQPAPDVLICTPLFLGRFTKGGCVKDISLF 225          
BLAST of mRNA_P-wetherbeei_contig18695.1.1 vs. uniprot
Match: A0A445JLI2_GLYSO (DEAD-box ATP-dependent RNA helicase 22 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445JLI2_GLYSO)

HSP 1 Score: 101 bits (251), Expect = 8.070e-22
Identity = 68/182 (37.36%), Postives = 93/182 (51.10%), Query Frame = 0
Query:    6 EEIFYGERVPFEALGLGPELCMRLSELGLETSTAVQATAVPRILAGKDVVIGAETGSGKTLAYLMPLLQRLLLARDAPEPTPEPPEELLGGAQAWCLFPDAIVLLPNRELCEQVVAVANSLLAGGVXXXXXXXXXXXXXDRSSRVVTAAAAYGGLGWPYGPGRPAPTLLVCTPQLLDGYGSL 187
            +  F  E V + +LGL   +   LS +GL   + VQA++VP +L+GKDV+I AETGSGKT +YL+PL+ +L +       T E     +   +   L    +VL PN +LCEQVV +ANSL                  D S  +V+AAA  G  GWP       P ++V TP  L  Y  L
Sbjct:   69 DTFFAEENVSWSSLGLSDTISRALSNIGLNRPSLVQASSVPSVLSGKDVIIAAETGSGKTYSYLVPLIDKLRV-------TQERSLLAVSDREVTSLHKVLLVLCPNVQLCEQVVRMANSLCK----------------DDSETIVSAAAICGKQGWPIR----EPDVIVTTPAALLNYVDL 223          
BLAST of mRNA_P-wetherbeei_contig18695.1.1 vs. uniprot
Match: A0A2K3PQA1_TRIPR (DEAD-box ATP-dependent RNA helicase 22-like protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3PQA1_TRIPR)

HSP 1 Score: 100 bits (248), Expect = 2.110e-21
Identity = 68/180 (37.78%), Postives = 95/180 (52.78%), Query Frame = 0
Query:    6 EEIFYGERVPFEALGLGPELCMRLSELGLETSTAVQATAVPRILAGKDVVIGAETGSGKTLAYLMPLLQRLLLARDAPEPTPEPPEELLGGAQAWCLFPDA----IVLLPNRELCEQVVAVANSLLAGGVXXXXXXXXXXXXXDRSSRVVTAAAAYGGLGWPYGPGRPAPTLLVCTPQLL 181
            +  F  E V + +LGL   L   LS++GL+T + VQA+++P +L+GKDVVI AETGSGKT +YL+PL+ +L   RD  E +       L       ++P A    +VL PN +LCEQV ++ANSL +                D    VV  A+  G  GWP       P ++V TP  L
Sbjct:   65 DTFFAQETVSWSSLGLSDTLSAALSKIGLKTPSLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLIDKL---RDTQEHS-------LDAVSDKEVYPPARKVLLVLCPNVQLCEQVASMANSLCS----------------DNGGTVVNVASICGRQGWPIR----EPDIIVTTPAAL 214          
BLAST of mRNA_P-wetherbeei_contig18695.1.1 vs. uniprot
Match: A0A0R0IZT5_SOYBN (Uncharacterized protein n=2 Tax=Glycine max TaxID=3847 RepID=A0A0R0IZT5_SOYBN)

HSP 1 Score: 101 bits (251), Expect = 2.310e-21
Identity = 68/182 (37.36%), Postives = 93/182 (51.10%), Query Frame = 0
Query:    6 EEIFYGERVPFEALGLGPELCMRLSELGLETSTAVQATAVPRILAGKDVVIGAETGSGKTLAYLMPLLQRLLLARDAPEPTPEPPEELLGGAQAWCLFPDAIVLLPNRELCEQVVAVANSLLAGGVXXXXXXXXXXXXXDRSSRVVTAAAAYGGLGWPYGPGRPAPTLLVCTPQLLDGYGSL 187
            +  F  E V + +LGL   +   LS +GL   + VQA++VP +L+GKDV+I AETGSGKT +YL+PL+ +L +       T E     +   +   L    +VL PN +LCEQVV +ANSL                  D S  +V+AAA  G  GWP       P ++V TP  L  Y  L
Sbjct:   69 DTFFAEENVSWSSLGLSDTISRALSNIGLNRPSLVQASSVPSVLSGKDVIIAAETGSGKTYSYLVPLIDKLRV-------TQERSLLAVSDREVTSLHKVLLVLCPNVQLCEQVVRMANSLCK----------------DDSETIVSAAAICGKQGWPIR----EPDVIVTTPAALLNYVDL 223          
BLAST of mRNA_P-wetherbeei_contig18695.1.1 vs. uniprot
Match: A0A834T4A2_9FABA (DEAD-box ATP-dependent RNA helicase 22 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834T4A2_9FABA)

HSP 1 Score: 100 bits (250), Expect = 2.560e-21
Identity = 67/173 (38.73%), Postives = 90/173 (52.02%), Query Frame = 0
Query:   12 ERVPFEALGLGPELCMRLSELGLETSTAVQATAVPRILAGKDVVIGAETGSGKTLAYLMPLLQRLLLARDAPEPTPEPPEELLGGAQAWCLFPDAIVLLPNRELCEQVVAVANSLLAGGVXXXXXXXXXXXXXDRSSRVVTAAAAYGGLGWPYGPGRPAPTLLVCTPQLLDGY 184
            E V + +LGL   +   LS +GL+  + VQA+++P +L+GKDVVI AETGSGKT +YL+PL+ +L  A    E T    EE L            ++L PN +LCEQVV +ANSL                  D S  +V+ AA  G  GWP       P ++V TP  L  Y
Sbjct:   80 ENVSWNSLGLSDSISRALSNIGLDRPSLVQASSIPSVLSGKDVVIAAETGSGKTHSYLVPLIDKLRGAHHNSEKTAHSQEESLPHEVL-------LILCPNVQLCEQVVRMANSL----------------HRDNSEPIVSVAAICGRQGWP----TREPDVIVTTPVALLNY 225          
BLAST of mRNA_P-wetherbeei_contig18695.1.1 vs. uniprot
Match: A0A371H9I8_MUCPR (DEAD-box ATP-dependent RNA helicase 22 (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371H9I8_MUCPR)

HSP 1 Score: 99.8 bits (247), Expect = 6.430e-21
Identity = 70/186 (37.63%), Postives = 93/186 (50.00%), Query Frame = 0
Query:    4 AAEEIFYGERVPFEALGLGPELCMRLSELGLETSTAVQATAVPRILAGKDVVIGAETGSGKTLAYLMPLLQRLLLARDAPEPTPEPPEELLGGAQAWCLFPDAI--VLLPNRELCEQVVAVANSLLAGGVXXXXXXXXXXXXXDRSSRVVTAAAAYGGLGWPYGPGRPAPTLLVCTPQLLDGYGSL 187
            A +  F  E V + +LGL   +   LS +GL T + VQA++VP +L+GKDV+I AETGSGKT +YL+PL+ +L   RD  E        L   +      P  +  VL PN +LCEQVV +ANSL                  D    +V+ AA  G  GWP       P ++V TP  L  Y  L
Sbjct:   72 ARDTFFAEENVSWSSLGLSDTISRALSNIGLTTPSLVQASSVPSVLSGKDVIIAAETGSGKTYSYLVPLIDKL---RDNQE------HSLYAVSDQEVSSPQKVLLVLCPNVQLCEQVVRMANSLCR----------------DNGETIVSVAAICGRQGWPIR----EPDVIVTTPAALLNYVDL 228          
BLAST of mRNA_P-wetherbeei_contig18695.1.1 vs. uniprot
Match: R1D7Z2_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D7Z2_EMIHU)

HSP 1 Score: 94.0 bits (232), Expect = 7.360e-21
Identity = 55/113 (48.67%), Postives = 69/113 (61.06%), Query Frame = 0
Query:   16 FEALGLGPELCMRLSELGLETSTAVQATAVPRILAGKDVVIGAETGSGKTLAYLMPLLQRLLLARDA-PEPTPEPPEELLGGAQAWCLFPDAIVLLPNRELCEQVVAVANSLL 127
            F+ LGL   L   + +LGLET T VQA  +P  LAGKDV+  A TGSGKT AY++P+LQ++L  +DA P PT               L P A+VL+P RELC+QV  VA  LL
Sbjct:    8 FKELGLDLRLLKAVQKLGLETPTPVQARCIPLALAGKDVLAKAPTGSGKTYAYVVPMLQKVLTRQDAAPGPT---------------LSPGALVLVPTRELCQQVYGVARGLL 105          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18695.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBP8_9PHAE1.410e-5048.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR69_ECTSI9.040e-4948.00DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A836CM84_9STRA4.860e-3651.20P-loop containing nucleoside triphosphate hydrolas... [more]
A0A0G4ESI9_VITBC2.180e-3240.51Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A445JLI2_GLYSO8.070e-2237.36DEAD-box ATP-dependent RNA helicase 22 n=1 Tax=Gly... [more]
A0A2K3PQA1_TRIPR2.110e-2137.78DEAD-box ATP-dependent RNA helicase 22-like protei... [more]
A0A0R0IZT5_SOYBN2.310e-2137.36Uncharacterized protein n=2 Tax=Glycine max TaxID=... [more]
A0A834T4A2_9FABA2.560e-2138.73DEAD-box ATP-dependent RNA helicase 22 n=1 Tax=Sen... [more]
A0A371H9I8_MUCPR6.430e-2137.63DEAD-box ATP-dependent RNA helicase 22 (Fragment) ... [more]
R1D7Z2_EMIHU7.360e-2148.67Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 9..187
e-value: 7.9E-30
score: 105.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 10..182
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 38..128
e-value: 3.5E-17
score: 62.7
NoneNo IPR availablePANTHERPTHR24031:SF421ATP-DEPENDENT RNA HELICASE DDX28-RELATEDcoord: 34..144
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 34..144
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 45..151
score: 10.307886

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18695contigP-wetherbeei_contig18695:688..1272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18695.1.1mRNA_P-wetherbeei_contig18695.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18695 688..1272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18695.1.1 ID=prot_P-wetherbeei_contig18695.1.1|Name=mRNA_P-wetherbeei_contig18695.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=195bp
LDPAAEEIFYGERVPFEALGLGPELCMRLSELGLETSTAVQATAVPRILA
GKDVVIGAETGSGKTLAYLMPLLQRLLLARDAPEPTPEPPEELLGGAQAW
CLFPDAIVLLPNRELCEQVVAVANSLLAGGVGGGGGGSTQNSETDRSSRV
VTAAAAYGGLGWPYGPGRPAPTLLVCTPQLLDGYGSLKNIPPFVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd