prot_P-wetherbeei_contig186.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig186.3.1
Unique Name	prot_P-wetherbeei_contig186.3.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	156

Homology

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BLAST of mRNA_P-wetherbeei_contig186.3.1 vs. uniprot
Match: A0A835Z9B6_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B6_9STRA)

HSP 1 Score: 268 bits (684), Expect = 4.300e-90
Identity = 132/153 (86.27%), Postives = 145/153 (94.77%), Query Frame = 0

Query:    1 MIKFVLMVNKMGQTRISSYYEWMPIPERVALEAEVVRRCFARSELQCSFFEFRGYKIIYRRYASLFFIVGVDS-DEENELGILEFIHNLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGFVVEGNKDNVLRPVQLMDKVVSTEESIFGS 152
            MIKFVLMVNKMGQTR+SSYYEW+PIPERVALEAEVVRRCF+RSELQCSFFEFRGYKIIYRRYASLFFIVGVDS DEENELG+LEFIH LVETLDKYFQSVCELDIMFNLEKTHFILDEMV+NG V E N+DN+L+P+QLMDKV + +++ FGS
Sbjct:    1 MIKFVLMVNKMGQTRVSSYYEWLPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVDSSDEENELGMLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVMNGCVCEANRDNILKPLQLMDKVSANDDAGFGS 153

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BLAST of mRNA_P-wetherbeei_contig186.3.1 vs. uniprot
Match: D8LPP6_ECTSI (AP complex subunit sigma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP6_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 2.570e-89
Identity = 131/157 (83.44%), Postives = 144/157 (91.72%), Query Frame = 0

Query:    1 MIKFVLMVNKMGQTRISSYYEWMPIPERVALEAEVVRRCFARSELQCSFFEFRGYKIIYRRYASLFFIVGV--DSDEENELGILEFIHNLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGFVVEGNKDNVLRPVQLMDKVVSTEESIFGSGKS 155
            MIKFVLMVNKMGQTR+SSYY+WMPIPERVALEAEVVRRCF+RSELQCSFFEFRGYKIIYRRYASLFFIVGV  DSD+ENELG+LEFIH LVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNG++ EGN++NVL+P+ LMD      +S+FGS  S
Sbjct:    1 MIKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVDSDDENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDSSSHAGDSVFGSKSS 157

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BLAST of mRNA_P-wetherbeei_contig186.3.1 vs. uniprot
Match: A0A7S2UUI5_9STRA (AP complex subunit sigma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUI5_9STRA)

HSP 1 Score: 244 bits (622), Expect = 1.060e-80
Identity = 109/150 (72.67%), Postives = 138/150 (92.00%), Query Frame = 0

Query:    1 MIKFVLMVNKMGQTRISSYYEWMPIPERVALEAEVVRRCFARSELQCSFFEFRGYKIIYRRYASLFFIVGVDSDEENELGILEFIHNLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGFVVEGNKDNVLRPVQLMDKVVSTEESIF 150
            MIKF+LMVNK GQTR+SSY+EWM IPERVALE+E++R+C +R+E QCSF E+RGY++IYRRYASLFFIVGV +DEENELG+LEFIH+LVETLDKYF+SVCELDIMFN+EK HFILDEMV+NG+++E N+ N+L+P+  MDK+ ++E+SIF
Sbjct:    1 MIKFILMVNKQGQTRLSSYFEWMTIPERVALESEIIRKCLSRAEYQCSFLEYRGYRVIYRRYASLFFIVGVGADEENELGVLEFIHSLVETLDKYFESVCELDIMFNMEKAHFILDEMVMNGYIMETNRTNILKPIAQMDKMANSEDSIF 150

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BLAST of mRNA_P-wetherbeei_contig186.3.1 vs. uniprot
Match: F0Y567_AURAN (AP complex subunit sigma n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y567_AURAN)

HSP 1 Score: 236 bits (602), Expect = 1.180e-77
Identity = 109/149 (73.15%), Postives = 134/149 (89.93%), Query Frame = 0

Query:    2 IKFVLMVNKMGQTRISSYYEWMPIPERVALEAEVVRRCFARSELQCSFFEFRGYKIIYRRYASLFFIVGVDSDEENELGILEFIHNLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGFVVEGNKDNVLRPVQLMDKVVSTEESIF 150
            I+F+LMVNK GQTR+S+YYEW+P+PERVALE+E++R+C +RSE QCSF E+RGYK++YRRYASLFFIVG + D ENELGILEFIH LVETLDKYF+SVCELDIMFNLEK HFILDEMV+NG +VE NK NVL+P+ LM+K  ++EE++F
Sbjct:    3 IRFILMVNKQGQTRLSTYYEWLPMPERVALESEIIRKCLSRSEFQCSFVEYRGYKVVYRRYASLFFIVGCEQDSENELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFILDEMVMNGCIVETNKANVLKPIALMEK--ASEETLF 149

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BLAST of mRNA_P-wetherbeei_contig186.3.1 vs. uniprot
Match: A0A7S3ZZG7_9STRA (AP complex subunit sigma n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZG7_9STRA)

HSP 1 Score: 234 bits (597), Expect = 6.590e-77
Identity = 112/149 (75.17%), Postives = 132/149 (88.59%), Query Frame = 0

Query:    2 IKFVLMVNKMGQTRISSYYEWMPIPERVALEAEVVRRCFARSELQCSFFEFRGYKIIYRRYASLFFIVGVDSDEENELGILEFIHNLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGFVVEGNKDNVLRPVQLMDKVVSTEESIF 150
            IKFVLMVNK GQTR+S+YYEW+ +PERVALEAE++R C +RSE QCSF E+RGYK++YRRYASLFFIVGVD D ENELGILEFIH LVETLDKYF+SVCELDIMFNLEK HFILDEMV++G VVE NK N+L+P+ LM+K  ++EE +F
Sbjct:    3 IKFVLMVNKQGQTRLSTYYEWLSMPERVALEAEIIRTCLSRSEFQCSFVEYRGYKVVYRRYASLFFIVGVDQDGENELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFILDEMVVDGCVVETNKVNILKPIALMEK--ASEEKLF 149

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BLAST of mRNA_P-wetherbeei_contig186.3.1 vs. uniprot
Match: A0A7S3GXI4_9STRA (AP complex subunit sigma n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXI4_9STRA)

HSP 1 Score: 232 bits (591), Expect = 5.590e-76
Identity = 105/150 (70.00%), Postives = 132/150 (88.00%), Query Frame = 0

Query:    1 MIKFVLMVNKMGQTRISSYYEWMPIPERVALEAEVVRRCFARSELQCSFFEFRGYKIIYRRYASLFFIVGVDSDEENELGILEFIHNLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGFVVEGNKDNVLRPVQLMDKVVSTEESIF 150
            MIKFVLMVNK GQTR++SY++W PI ERVALEAE++RRC +R+E QCSF E+RG+K++YRRYASLFF+V VD +EENEL ILEFIH+LVET+DKYF+SVCELDIMF++EK H+I+DEMV+NG +VE NK N+L+P+ LMDK+ S E  IF
Sbjct:    1 MIKFVLMVNKQGQTRLASYFQWYPIQERVALEAEIIRRCLSRTEFQCSFIEYRGFKVVYRRYASLFFVVAVDGEEENELAILEFIHSLVETMDKYFESVCELDIMFHIEKAHYIVDEMVVNGSIVENNKVNILKPLALMDKLASAEGGIF 150

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BLAST of mRNA_P-wetherbeei_contig186.3.1 vs. uniprot
Match: W7U353_9STRA (AP complex subunit sigma n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U353_9STRA)

HSP 1 Score: 230 bits (586), Expect = 5.500e-75
Identity = 110/164 (67.07%), Postives = 133/164 (81.10%), Query Frame = 0

Query:    1 MIKFVLMVNKMGQTRISSYYEWMPIPERVALEAEVVRRCFARSELQCSFFEFRGYKIIYRRYASLFFIVGVDSDE--------------ENELGILEFIHNLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGFVVEGNKDNVLRPVQLMDKVVSTEESIF 150
            MI+F+L VNK GQTR+SSYY WM IPERVALEAE++R+C +RSELQC F E+RG+K+IYRRYASLFFIVGV+ D+              ENEL ILEFIH LVETLDKYF+SVCELDIMFNLEK HFI+DEMV+NG +V+ NK N+L+P+ LM+K  ++EESIF
Sbjct:    1 MIRFILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGVEGDDATGSAHSVSTNGGCENELAILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVINGHIVDANKTNILKPIHLMEKASASEESIF 164

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BLAST of mRNA_P-wetherbeei_contig186.3.1 vs. uniprot
Match: A0A2R5GZ26_9STRA (AP complex subunit sigma n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GZ26_9STRA)

HSP 1 Score: 227 bits (579), Expect = 2.880e-74
Identity = 109/142 (76.76%), Postives = 124/142 (87.32%), Query Frame = 0

Query:    1 MIKFVLMVNKMGQTRISSYYEWMPIPERVALEAEVVRRCFARSELQCSFFEFRGYKIIYRRYASLFFIVGVDSDEENELGILEFIHNLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGFVVEGNKDNVLRPVQLMDKV 142
            MIKFVLMVNK GQTR+SSYYEW+ I ER ALEAE++R+C AR+E QCSF E RGYK++YRRYASLFFIVGVD DEENELGILEFIH LVETLDKYF +VCELDIMFNLEK HFIL+EMV NG VVE NK NVL+P+ ++D +
Sbjct:    1 MIKFVLMVNKQGQTRLSSYYEWLTIEERGALEAEIIRKCLARTENQCSFMENRGYKVVYRRYASLFFIVGVDQDEENELGILEFIHCLVETLDKYFSNVCELDIMFNLEKAHFILNEMVQNGHVVEANKANVLKPITMLDSI 142

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BLAST of mRNA_P-wetherbeei_contig186.3.1 vs. uniprot
Match: A0A7S1C3U2_9STRA (AP complex subunit sigma n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3U2_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.850e-72
Identity = 102/140 (72.86%), Postives = 125/140 (89.29%), Query Frame = 0

Query:    2 IKFVLMVNKMGQTRISSYYEWMPIPERVALEAEVVRRCFARSELQCSFFEFRGYKIIYRRYASLFFIVGVDSDEENELGILEFIHNLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGFVVEGNKDNVLRPVQLMDK 141
            IKFVLMVNK GQTR++ Y +W+PI ERVALEAE++R+C +R+ELQCSF E+RGYK++YRRYASL+FIVGV  D+ENEL ILEFIH LVETLDKYF++VCELDIMFNLEK HFIL+EM++NG +VE NK NVLRP+ L++K
Sbjct:    3 IKFVLMVNKQGQTRLAEYCDWLPIEERVALEAEIIRKCLSRNELQCSFMEYRGYKVVYRRYASLYFIVGVKGDDENELSILEFIHALVETLDKYFENVCELDIMFNLEKAHFILNEMLMNGCIVETNKANVLRPIHLLEK 142

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BLAST of mRNA_P-wetherbeei_contig186.3.1 vs. uniprot
Match: A0A7S2FA09_9STRA (AP complex subunit sigma n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FA09_9STRA)

HSP 1 Score: 222 bits (566), Expect = 6.970e-72
Identity = 106/152 (69.74%), Postives = 131/152 (86.18%), Query Frame = 0

Query:    1 MIKFVLMVNKMGQTRISSYYEWMPIPERVALEAEVVRRCFARSELQCSFFEFRGYKIIYRRYASLFFIVGVDSDEENELGILEFIHNLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGFVVEGNKDNVLRPVQLMDKVVSTEESIFGS 152
            M+KFVLMVNK GQTR+SSYYEW+P+ ER ALEAE++R+C +R+E QCSF E+RGYK+IYRRYASLFFIVG+  D  NELG+LEFIH LVETLDKYF+SVCELDIMFNLEK HFIL+EMV NG + E NK N+L+P+ LM+K  ++++S+F S
Sbjct:   20 MLKFVLMVNKQGQTRLSSYYEWIPMQERCALEAEIIRKCLSRNETQCSFVEYRGYKVIYRRYASLFFIVGM-KDNMNELGVLEFIHALVETLDKYFESVCELDIMFNLEKAHFILEEMVQNGCIFETNKANILKPIMLMEK--ASDDSVFSS 168

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig186.3.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig186.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z9B6_9STRA	4.300e-90	86.27	AP complex subunit sigma n=1 Tax=Tribonema minus T...	[more]
D8LPP6_ECTSI	2.570e-89	83.44	AP complex subunit sigma n=1 Tax=Ectocarpus silicu...	[more]
A0A7S2UUI5_9STRA	1.060e-80	72.67	AP complex subunit sigma n=1 Tax=Fibrocapsa japoni...	[more]
F0Y567_AURAN	1.180e-77	73.15	AP complex subunit sigma n=1 Tax=Aureococcus anoph...	[more]
A0A7S3ZZG7_9STRA	6.590e-77	75.17	AP complex subunit sigma n=1 Tax=Pelagomonas calce...	[more]
A0A7S3GXI4_9STRA	5.590e-76	70.00	AP complex subunit sigma n=1 Tax=Spumella elongata...	[more]
W7U353_9STRA	5.500e-75	67.07	AP complex subunit sigma n=2 Tax=Nannochloropsis g...	[more]
A0A2R5GZ26_9STRA	2.880e-74	76.76	AP complex subunit sigma n=1 Tax=Hondaea fermental...	[more]
A0A7S1C3U2_9STRA	2.850e-72	72.86	AP complex subunit sigma n=1 Tax=Bicosoecida sp. C...	[more]
A0A7S2FA09_9STRA	6.970e-72	69.74	AP complex subunit sigma n=1 Tax=Florenciella parv...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 1..142 e-value: 3.3E-43 score: 147.0
IPR016635	Adaptor protein complex, sigma subunit	PIRSF	PIRSF015588	AP_complex_sigma	coord: 1..152 e-value: 6.2E-53 score: 176.7
IPR016635	Adaptor protein complex, sigma subunit	PANTHER	PTHR11753	ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY	coord: 2..142
None	No IPR available	GENE3D	3.30.450.60		coord: 1..152 e-value: 1.4E-61 score: 208.9
None	No IPR available	PANTHER	PTHR11753:SF50	AP COMPLEX SUBUNIT SIGMA	coord: 2..142
None	No IPR available	CDD	cd14832	AP4_sigma	coord: 3..141 e-value: 1.55714E-89 score: 255.235
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..140

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig186	contig	P-wetherbeei_contig186:3103..4632 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig186.3.1	mRNA_P-wetherbeei_contig186.3.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig186 3103..4632 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig186.3.1 ID=prot_P-wetherbeei_contig186.3.1|Name=mRNA_P-wetherbeei_contig186.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp
MIKFVLMVNKMGQTRISSYYEWMPIPERVALEAEVVRRCFARSELQCSFF
EFRGYKIIYRRYASLFFIVGVDSDEENELGILEFIHNLVETLDKYFQSVC
ELDIMFNLEKTHFILDEMVLNGFVVEGNKDNVLRPVQLMDKVVSTEESIF
GSGKS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022775	AP_mu_sigma_su
IPR016635	AP_complex_ssu
IPR011012	Longin-like_dom_sf