mRNA_P-wetherbeei_contig18255.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18255.1.1 vs. uniprot
Match: D7G0U6_ECTSI (DUSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U6_ECTSI) HSP 1 Score: 188 bits (477), Expect = 9.960e-57 Identity = 87/122 (71.31%), Postives = 103/122 (84.43%), Query Frame = 1
Query: 1 GDSENDLGAGRASYAGADDLDTLDRRRTEELRLISKFDTSSINPRRESWFLVDTKWLERWAKFVRGEGAPPGHISNTSLLEADLRTARPGLRAKVDYRGVNPVVWFLYVEMYGKDEAPEICR 366
GD E++LGAGRASY DDLDTLDRRRTEELRLI +FD+++INPRRE WF+VDTKWL+ WAKFVRGEG PPG ISN L++ DL+T GL ++VDYRGVNP VWFLY+EMYGKD A ++CR
Sbjct: 56 GDGEDELGAGRASYG--DDLDTLDRRRTEELRLIGEFDSANINPRRECWFIVDTKWLQTWAKFVRGEGPPPGRISNKGLVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCR 175
BLAST of mRNA_P-wetherbeei_contig18255.1.1 vs. uniprot
Match: A0A6U1BH02_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1BH02_9STRA) HSP 1 Score: 134 bits (336), Expect = 6.710e-36 Identity = 60/119 (50.42%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 10 ENDLGAGRASYAGADDLDTLDRRRTEELRLISKFDTSSINPRRESWFLVDTKWLERWAKFVRGEGAPPGHISNTSLLEADLRTARPGLRAKVDYRGVNPVVWFLYVEMYGKDEAPEICR 366
E+DLGA ++L+ L+ RR+ EL L+SKFD + INPRRE WFL+DT W+ W+ ++ G+ PG ISN +L EAD RT + L K DYRG++P++W+++VE+YGKD APE+CR
Sbjct: 27 EDDLGA-----LTPEELELLEERRSAELALVSKFDKTEINPRRECWFLIDTTWIRDWSLYMEGKRDSPGRISNLNLFEADERTVKRKLVPKQDYRGLSPLMWYIFVELYGKDAAPELCR 140
BLAST of mRNA_P-wetherbeei_contig18255.1.1 vs. uniprot
Match: A0A7S2DAT7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAT7_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.350e-29 Identity = 54/122 (44.26%), Postives = 77/122 (63.11%), Query Frame = 1
Query: 1 GDSENDLGAGRASYAGADDLDTLDRRRTEELRLISKFDTSSINPRRESWFLVDTKWLERWAKFVRGEGAPPGHISNTSLLEADLRTARPGLRAKVDYRGVNPVVWFLYVEMYGKDEAPEICR 366
G+ E++LGA ++ L+ RR E L+ KFD + IN RRE WFL++T W + W K++ G+ PP ISN +L E + +P L+A DYRGV+ VW+++VE+YG D APEICR
Sbjct: 31 GEWEDELGA-----LSPEEKALLEERRYAEYELVKKFDVTEINIRRECWFLINTIWFDEWLKYMSGKVEPPDRISNLNLYEEGGQKLKPNLQAVKDYRGVSATVWYIFVELYGSDNAPEICR 147
BLAST of mRNA_P-wetherbeei_contig18255.1.1 vs. uniprot
Match: A0A7S3M225_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M225_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.270e-21 Identity = 47/100 (47.00%), Postives = 67/100 (67.00%), Query Frame = 1
Query: 76 RRTEELRLISKFDTSSINPRRESWFLVDTKWLERWAKFVRGEGAP--PGHISNTSLLEA-DLRTARPGLRAKVDYRGVNPVVWFLYVEMYGKDEAPEICR 366
R+ +EL+L+ KFD S+IN +E WFLVD+ WL +W+ FV G PG +S LL+A D+ L DYRGV P+V+F+++E+YGKD +PE+CR
Sbjct: 41 RKKQELKLVKKFDKSAINVAKECWFLVDSDWLNKWSAFVNGGDGEDSPGPLSTKELLDAQDIPLLN--LMPIRDYRGVPPIVYFIFLELYGKDSSPELCR 138
BLAST of mRNA_P-wetherbeei_contig18255.1.1 vs. uniprot
Match: D7FUK4_ECTSI (DUSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUK4_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 5.510e-20 Identity = 48/105 (45.71%), Postives = 60/105 (57.14%), Query Frame = 1
Query: 67 LDRRRTEELRLISKFDTSSINPR-RESWFLVDTKWLERWAKFVRGEGAPPGHISNTSLL----EADLRTARPGLRAKVDYRGVNPVVWFLYVEMYGKDEAPEICR 366
LDRRR EL LI KFD +INP E WF++D KW+ W KFV G+ + PG ISN +L + D T+ L VWF++ E+YG DEAP ICR
Sbjct: 207 LDRRRATELALIKKFDRPTINPHVGEFWFVIDAKWINSWVKFVMGQASAPGPISNLNLYPPDGDGDQSTSAKSL------------VWFIFQEIYGTDEAPGICR 299
BLAST of mRNA_P-wetherbeei_contig18255.1.1 vs. uniprot
Match: A0A2D4CFD6_PYTIN (DUSP domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFD6_PYTIN) HSP 1 Score: 80.9 bits (198), Expect = 1.040e-15 Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 1
Query: 70 DRRRTEELRLISKFDTSSINPRRESWFLVDTKWLERWAKFVRGEGAP------PGHISNTSLLEADLRTARPGLRAKVDYRGVNPVVWFLYVEMYGKDEAPEICR 366
+ RR EE L+ K+DT + R E+WF++++ WL+ W ++ E P PG ++N SL + + GL A YRGVNP+V+ LY E+YG A I R
Sbjct: 52 EERRREERALVLKYDTRELK-RGEAWFIIESSWLDAWMSYILSEDDPDCPVVKPGPLTNYSLFDPKEYCLKKGLEATKHYRGVNPMVYALYAEIYGTAGAKPIAR 155
BLAST of mRNA_P-wetherbeei_contig18255.1.1 vs. uniprot
Match: C5K6W1_PERM5 (DUSP domain-containing protein (Fragment) n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5K6W1_PERM5) HSP 1 Score: 75.5 bits (184), Expect = 1.860e-13 Identity = 36/102 (35.29%), Postives = 54/102 (52.94%), Query Frame = 1
Query: 34 ASYAGADDLDTLDRRRTEELRLISKFDTSSINPRRESWFLVDTKWLERWAKFVRGEGAPPGHISNTSLLEADLRTARPGLRAKVDYRGVNPVVWFLYVEMYG 339
A + +D +TL R E + KFDT + P + +++V TKW++ W +F+ E PG ISN L DL+T P DYRG+N +W ++ YG
Sbjct: 85 AKFMASDTEETLRLRARYEAEFVRKFDTVRLPPG-DIYYIVSTKWIDSWKRFISEEKELPGPISNNLLFHDDLKTLLPRFVRSKDYRGINQRIWSFWLARYG 185
BLAST of mRNA_P-wetherbeei_contig18255.1.1 vs. uniprot
Match: A0A6H5L668_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L668_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 2.620e-12 Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 1
Query: 235 LLEADLRTARPGLRAKVDYRGVNPVVWFLYVEMYGKDEAPEICR 366
L++ DL+T GL ++VDYRGVNP VWFLY+EMYGKD A ++CR
Sbjct: 30 LVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCR 73
BLAST of mRNA_P-wetherbeei_contig18255.1.1 vs. uniprot
Match: A0A8K1CKP5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKP5_PYTOL) HSP 1 Score: 70.1 bits (170), Expect = 8.530e-12 Identity = 36/105 (34.29%), Postives = 56/105 (53.33%), Query Frame = 1
Query: 70 DRRRTEELRLISKFDTSSINPRRESWFLVDTKWLERWAKFVRGEGAP------PGHISNTSLLEADLRTARPGLRAKVDYRGVNPVVWFLYVEMYGKDEAPEICR 366
+ RR E +I + DT + R E+WF+++T WL+ W ++ E P PG ++N +L + + L A YRGVNP+V+ +Y E+YG A I R
Sbjct: 47 EERRRLEREMILRHDTRELK-RGEAWFIIETSWLDAWMAYILSEDDPDCPVVKPGPLTNYTLFDPKEYCLKRDLVATKHYRGVNPMVYAMYAELYGTAGAKPIVR 150
BLAST of mRNA_P-wetherbeei_contig18255.1.1 vs. uniprot
Match: A0A6P7T8S8_OCTVU (Ubiquitinyl hydrolase 1 n=2 Tax=Octopus TaxID=6643 RepID=A0A6P7T8S8_OCTVU) HSP 1 Score: 53.5 bits (127), Expect = 1.260e-5 Identity = 28/83 (33.73%), Postives = 42/83 (50.60%), Query Frame = 1
Query: 139 ESWFLVDTKWLERWAKFVR----------GEGAPPGHISNTSLLEADLRTARPGLRAKVDYRGVNPVVWFLYVEMYGKDEAPE 357
++W+LVDTKWL++W K+V + A PG I N +L + D+ T + L ++DY + W V YG E E
Sbjct: 28 DTWYLVDTKWLKQWKKYVGFDSWDSYSAGDQSANPGPIDNKTLFKEDMCTLKEHLIDELDYVLLPTEGWNKLVSWYGTVEGQE 110 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18255.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18255.1.1 >prot_P-wetherbeei_contig18255.1.1 ID=prot_P-wetherbeei_contig18255.1.1|Name=mRNA_P-wetherbeei_contig18255.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=131bp GDSENDLGAGRASYAGADDLDTLDRRRTEELRLISKFDTSSINPRRESWFback to top mRNA from alignment at P-wetherbeei_contig18255:284..1167- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18255.1.1 ID=mRNA_P-wetherbeei_contig18255.1.1|Name=mRNA_P-wetherbeei_contig18255.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=884bp|location=Sequence derived from alignment at P-wetherbeei_contig18255:284..1167- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18255:284..1167- >mRNA_P-wetherbeei_contig18255.1.1 ID=mRNA_P-wetherbeei_contig18255.1.1|Name=mRNA_P-wetherbeei_contig18255.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig18255:284..1167- (Phaeothamnion wetherbeei SAG_119_79)back to top |