mRNA_P-wetherbeei_contig1062.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1062.1.1 vs. uniprot
Match: A0A835YTP7_9STRA (PSI domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTP7_9STRA) HSP 1 Score: 215 bits (548), Expect = 1.080e-60 Identity = 110/211 (52.13%), Postives = 134/211 (63.51%), Query Frame = 1 Query: 1 KCPGCLAVAGCGYCLSTLQCLEGTISGPGGGAPCPNWLADDEACPGVPHCDEYEGXXXXXXXXXXXWCASAGVCLTVSDIFGSECRGLVFDPPCPTSFIGGTLFLSLLSIITFNRQQRLRLQKFVVENRVVGDLVVEADPLFGGGRVTASGTTATGQPFSLALNETHFEVQAGYDVALRAGASAAVNDRGGSVDIAAGNGANPMGGAGGDV 633 KC C+A+AGCGYCLSTLQCL+GT+SGP G PCP+W D+ ACP VP C +YE WCAS C+T+S+IF +CRG VFD PCP+SF+G ENRVVG+LVVEADPLFGGG + ASGTT GQPF L L+ FEVQ+ YDV L +G + A + GG V I+AG+G NP+GG+GG V Sbjct: 3 KCSPCVALAGCGYCLSTLQCLDGTVSGPSDGTPCPSWSFDEAACPAVPECGQYENCSSCVASDECAWCASEAACMTISEIFSIDCRGTVFDLPCPSSFVG--------------------------ENRVVGNLVVEADPLFGGGSIRASGTTPMGQPFRLTLDSHMFEVQSSYDVDLLSGNTGAASTEGGHVRISAGSGTNPLGGSGGSV 187
BLAST of mRNA_P-wetherbeei_contig1062.1.1 vs. uniprot
Match: D7FS23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS23_ECTSI) HSP 1 Score: 184 bits (468), Expect = 5.880e-50 Identity = 105/209 (50.24%), Postives = 138/209 (66.03%), Query Frame = 1 Query: 1 KCPGCLAVAGCGYCLSTLQCLEGTISGPGGGAPCPNWLADDEACPGVPHCDEYEGXXXXXXXXXXXWCASAGVCLTVSDIFGSECRGLVFDPPCPTSFIGGTLFLSLLSIITFNRQQRLRLQKFVVENRVVGDLVVEADPLFGGGRVTASGTTATGQPFSLALNETHFEVQAGYDVALRAGASAAVNDRGGSVDIAAGNGANPMGGAGG 627 C C+ V GCGYCLSTLQC++GT SGP G+PCP W+++ + CP P C EY XXXXXXXXXXX G C+TVS+IF ++CRG VFD PCPTSF V ENR+VG+L++EADP FGGG+++ASGTT +G FSL+LN+T F VQ+G + ++ + S N GGS+ ++AG+G NP+GG+GG Sbjct: 38 NCTSCVGVGGCGYCLSTLQCVDGTSSGPSDGSPCPTWISEPDVCPETPRCGEYPXXXXXXXXXXXXXXXXXGACMTVSEIFSTDCRGTVFDLPCPTSF--------------------------VAENRLVGNLIIEADPQFGGGQLSASGTTESGDIFSLSLNDTTFRVQSGGNASILSANSINANAAGGSLSLSAGDGVNPIGGSGG 220
BLAST of mRNA_P-wetherbeei_contig1062.1.1 vs. uniprot
Match: A0A8J2WEE7_9STRA (Hypothetical protein n=7 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WEE7_9STRA) HSP 1 Score: 154 bits (389), Expect = 2.370e-39 Identity = 90/225 (40.00%), Postives = 114/225 (50.67%), Query Frame = 1 Query: 4 CPGCLAVAGCGYCLSTLQCLEGTISGPGGGAPCPNWLADDEACPGVPHCDEYEGXXXXXXXXXXXWCASAGVCLTVSDIFGSECRGLVFDPPCPTSFIGGTLFLSLLSIITFNRQQRLRLQKFVVENRVVGDLVVEADPLFGGGRVTASGTTATGQPFSLALNETHFEVQAGYDVALRAGASAAVNDRGGSVDIAAGNGANPMGGAGGDVRRAGGAGTGQAFYGG 678 C C A CG+CLSTLQC+E +GP G PC WL CP +P C++ WCAS CLTVS+IF SEC G +FDPPCP++ VENR+VG+L+VEADP+FGGG +SG G F ++E V + DV ++ G + N GGS+ +AAG+G NP GG GG GG G G GG Sbjct: 36 CGACAANPSCGFCLSTLQCMERGSNGPLSGLPCNYWLTAAAECPEIPQCEQLSSCGVCVDMEGCAWCASEQRCLTVSEIFLSECEGSIFDPPCPSN---------------------------PVENRIVGNLIVEADPVFGGGHFRSSGVGTGGGTFEFIIDEVEISVVSAGDVTIKGGQNFKENGMGGSMSLAAGSGVNPHGGQGGSATLRGGDGYGSPALGG 233
BLAST of mRNA_P-wetherbeei_contig1062.1.1 vs. uniprot
Match: A0A3R6YDC7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YDC7_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.670e-36 Identity = 90/228 (39.47%), Postives = 118/228 (51.75%), Query Frame = 1 Query: 1 KCPGCLAVAGCGYCLSTLQCLEGTISGPGGGAPCPNWL-ADDEACPGVPHCDEYEGXXXXXXXXXXXWCASAGVCLTVSDIFGSECRGLVFDPPCPTSFIGGTLFLSLLSIITFNRQQRLRLQKFVVENRVVGDLVVEADPLFGGGRVTASGTTATGQ-PFSLALNETHFEVQAGYDVALRAGASAAVNDRGGSVDIAAGNGANPMGGAGGDVRRAGGAGTGQAFYGG 678 KC CLA +GCG+C ST+QCL GT +GP PCP+WL AD CP PHCD WCAS +CLTV D + + CRG VFDPPCP +F V +N+VVG+L V ADP+FGGG ++ GT + + +++ T V + + L+AG + +N G SV+I AG+G + G GG V A G G G GG Sbjct: 57 KCGACLATSGCGFCHSTMQCLPGTTAGPSVAVPCPDWLFADAATCPQNPHCDRLVDCTSCAVADSCAWCASKSLCLTVEDTYTAACRGTVFDPPCPATF--------------------------VADNQVVGNLAVVADPVFGGGSLSVEGTRPLDKNSYRTSVDATGVSVDSAGSIDLKAGDATTMNVYGHSVNIEAGSGTSLNRGRGGSVLLAAGVGHGLERQGG 258
BLAST of mRNA_P-wetherbeei_contig1062.1.1 vs. uniprot
Match: A0A024TAR7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAR7_9STRA) HSP 1 Score: 144 bits (363), Expect = 6.900e-36 Identity = 90/228 (39.47%), Postives = 118/228 (51.75%), Query Frame = 1 Query: 1 KCPGCLAVAGCGYCLSTLQCLEGTISGPGGGAPCPNWL-ADDEACPGVPHCDEYEGXXXXXXXXXXXWCASAGVCLTVSDIFGSECRGLVFDPPCPTSFIGGTLFLSLLSIITFNRQQRLRLQKFVVENRVVGDLVVEADPLFGGGRVTASGTTATGQ-PFSLALNETHFEVQAGYDVALRAGASAAVNDRGGSVDIAAGNGANPMGGAGGDVRRAGGAGTGQAFYGG 678 KC CLA +GCG+C ST+QCL GT +GP PCP+WL AD CP PHCD WCAS +CLTV D + + CRG VFDPPCP +F V +N+VVG+L V ADP+FGGG ++ GT + + +++ T V + + L+AG + +N G SV+I AG+G + G GG V A G G G GG Sbjct: 51 KCGACLATSGCGFCHSTMQCLPGTAAGPSVAVPCPDWLFADAATCPQNPHCDLLVDCTSCAVADSCAWCASKSLCLTVEDTYTAACRGTVFDPPCPATF--------------------------VADNQVVGNLAVVADPVFGGGSLSVEGTRPLDKNSYRTSVDATGVSVDSAGSIDLKAGDATTMNVYGHSVNIEAGSGTSLNRGRGGSVLLAAGVGHGLERQGG 252
BLAST of mRNA_P-wetherbeei_contig1062.1.1 vs. uniprot
Match: A0A7S2WLG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WLG6_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.340e-35 Identity = 90/230 (39.13%), Postives = 112/230 (48.70%), Query Frame = 1 Query: 1 KCPGCLAVAGCGYCLSTLQCLEGTISGPGGGAPCPNWLADDEACPGVPHCDEYEGXXXXXXXXXXXWCASAGVCLTVSDIFGSE---CRGLVFDPPCPTSFIGGTLFLSLLSIITFNRQQRLRLQKFVVENRVVGDLVVEADPLFGGGRVTASGTTA-TGQPFSLALNETHFEVQAGYDVALRAGASAAVNDRGGSVDIAAGNGANPMGGAGGDVRRAGGAGTGQAFYGG 678 KC CLA GCGYCLSTLQC+ G +GP C +W + CP P CDEY WC S C V+++F E CRG V+ PPCP SF V NRV+G++VVE DP FGGG + G+ A TG F L +T +QA +D + AG VN+RGG V AG+G + G GG++ GAG GQ GG Sbjct: 47 KCKPCLAEKGCGYCLSTLQCMPGDAAGPESDTYCHDWKYEQGECPVKPACDEYSDCEKCASDDNCVWCGSTQKCKVVTELFSGEEDSCRGHVYSPPCPASF--------------------------VAVNRVIGNMVVEPDPAFGGGFLEVRGSAAGTGNAFEFKLTDTESVLQAAFDFSASAGDRTGVNERGGDVSFVAGDGESLNRGKGGNIVLRAGAGFGQVSQGG 250
BLAST of mRNA_P-wetherbeei_contig1062.1.1 vs. uniprot
Match: A0A2R5GJG3_9STRA (Myelin regulatory factor n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJG3_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.920e-27 Identity = 84/209 (40.19%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 58 CLEGTISGP-GGGAPCPNWLADDEACPGVPHCDEYEGXXXXXXXXXXXWCASAGVCLTVSDIFGSECRGLVFDPPCPTSFIGGTLFLSLLSIITFNRQQRLRLQKFVVENRVVGDLVVEADPLFGGGRVTASGTTA-TGQPFSLALNETHFEVQAGYDVALRAGASAAVNDRGGSVDIAAGNGANPMGGAGGDVRRAGGAGTGQAFYGG 678 CL G GP G CP+WL ++CP P C E++ XXXXXXXX C+ ++++F + CRG VFDPPCP SF+G NRV+G+LVVE DP+FGGG ++ SG+ TG F L ++ +Q+ DV++ AG VN+RGG V+I AG+G + GAGG +R A G G G GG Sbjct: 59 CLGGDEHGPTANGTFCPDWLGPQDSCPIPPACGEFDDCESXXXXXXXXXXXXXXXCMILTEVFSNGCRGTVFDPPCPASFVG--------------------------INRVIGNLVVEPDPVFGGGHISVSGSAEDTGNRFEFELTDSELSLQSATDVSIAAGNRTGVNERGGDVNIDAGDGNSLNRGAGGHIRLAAGTGAGTVAQGG 241
BLAST of mRNA_P-wetherbeei_contig1062.1.1 vs. uniprot
Match: A0A5A8EBR6_CAFRO (Peptidase S74 domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EBR6_CAFRO) HSP 1 Score: 119 bits (299), Expect = 2.540e-27 Identity = 63/152 (41.45%), Postives = 79/152 (51.97%), Query Frame = 1 Query: 4 CPGCLAVAGCGYCLSTLQCLEGTISGPGG--GAPCPNWLADDEACPGVPHCDEYEGXXXXXXXXXXXWCASAGVCLTVSDIFGSECRGLVFDPPCPTSFIGGTLFLSLLSIITFNRQQRLRLQKFVVENRVVGDLVVEADPLFGGGRVTASG 453 C C+ GCGYCLS+L+CL GT GP G C W + CP P C+E+ G WCAS CL V+D+F S+CRG VF+PPCP ++FV ENRVVG+L VEADP FGGG ++ +G Sbjct: 17 CGPCVQTQGCGYCLSSLRCLAGTADGPLPELGQACTEWAPSTDVCPAPPTCEEHFGCDDCTTDANCGWCASENRCLGVADLFSSDCRGTVFEPPCP--------------------------EQFVQENRVVGNLRVEADPAFGGGALSVTG 142
BLAST of mRNA_P-wetherbeei_contig1062.1.1 vs. uniprot
Match: A0A5A8D821_CAFRO (Peptidase S74 domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D821_CAFRO) HSP 1 Score: 116 bits (291), Expect = 3.000e-26 Identity = 62/152 (40.79%), Postives = 78/152 (51.32%), Query Frame = 1 Query: 4 CPGCLAVAGCGYCLSTLQCLEGTISGPGG--GAPCPNWLADDEACPGVPHCDEYEGXXXXXXXXXXXWCASAGVCLTVSDIFGSECRGLVFDPPCPTSFIGGTLFLSLLSIITFNRQQRLRLQKFVVENRVVGDLVVEADPLFGGGRVTASG 453 C C+ GCGYCLS+L+CL GT GP G C W + CP P C+E+ G WCAS CL V+D+F S+CRG VF+PPCP ++FV E RVVG+L VEADP FGGG ++ +G Sbjct: 1245 CGPCVQTQGCGYCLSSLRCLAGTADGPLPELGQACTEWAPSTDVCPAPPTCEEHFGCDDCTTDANCGWCASENRCLGVADLFSSDCRGTVFEPPCP--------------------------EQFVQEPRVVGNLRVEADPAFGGGALSVTG 1370
BLAST of mRNA_P-wetherbeei_contig1062.1.1 vs. uniprot
Match: G4ZCG8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZCG8_PHYSP) HSP 1 Score: 111 bits (277), Expect = 2.130e-24 Identity = 74/222 (33.33%), Postives = 103/222 (46.40%), Query Frame = 1 Query: 1 KCPGCLAVAGCGYCLSTLQCLEGTISGPGGGAP--CPNWLADDEACPGVPHCDEYEGXXXXXXXXXXXWCASAGVCLTVSDIFGSECRGLVFDPPCPTSFIGGTLFLSLLSIITFNRQQRLRLQKFVVENRVVGDLVVEADPLFGGGRVTASGTTATGQPFSLALNETHFEVQAGYDVALRAGASAAVNDRGGSVDIAAGNGANPMGGAGGDVRRAGGAGTG 660 +C C A CG+C STL C+ G + GP C +W+ + EACP P CD WCAS C+ V + FGS C+ LV D PCPT + T+ +VGD+++ +P + G T +SL +N++ VQ+G + LRAG N GG+V+IAAG+G + G GG V+ AGG G G Sbjct: 87 RCYDCAAEPSCGFCQSTLTCVAGNLQGPFDRYQVWCSDWIPEAEACPVNPQCDTITDCGTCAASDECVWCASDASCMAVEEGFGSGCKALVSDAPCPTVVVPETI--------------------------IVGDVIIHQEPPNVRRGIVVKGVTMHSTNYSLVVNQSAVSVQSGGVIQLRAGDDNRFNTAGGAVEIAAGDGVHQNRGRGGTVKIAGGNGLG 282 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1062.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1062.1.1 >prot_P-wetherbeei_contig1062.1.1 ID=prot_P-wetherbeei_contig1062.1.1|Name=mRNA_P-wetherbeei_contig1062.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp KCPGCLAVAGCGYCLSTLQCLEGTISGPGGGAPCPNWLADDEACPGVPHCback to top mRNA from alignment at P-wetherbeei_contig1062:11..870- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1062.1.1 ID=mRNA_P-wetherbeei_contig1062.1.1|Name=mRNA_P-wetherbeei_contig1062.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=860bp|location=Sequence derived from alignment at P-wetherbeei_contig1062:11..870- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1062:11..870- >mRNA_P-wetherbeei_contig1062.1.1 ID=mRNA_P-wetherbeei_contig1062.1.1|Name=mRNA_P-wetherbeei_contig1062.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig1062:11..870- (Phaeothamnion wetherbeei SAG_119_79)back to top |