mRNA_P-wetherbeei_contig18170.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18170.1.1 vs. uniprot
Match: A0A7Y1YWA5_9GAMM (Sec translocon accessory complex subunit YajC n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y1YWA5_9GAMM) HSP 1 Score: 144 bits (363), Expect = 1.180e-42 Identity = 68/106 (64.15%), Postives = 86/106 (81.13%), Query Frame = 1
Query: 1 MDYLIPNAWAQEAVGGAQGGLAGFLPLAILFLVFYLFLIRPQMKRQKEHAKLVRELAKGDEVVTTGGMLGRVTEVGANFVKLEIAKDTEVKVQKHAIAQVMPKGTV 318
MD+LI NA+AQ+A G GGL GFLPL ++F VFY LIRPQMKR KEH K+V ELAKGDEVVT GG+LGR+T++G +F+ LE+A + +KVQ+HA+A VMPKGT+
Sbjct: 1 MDFLIANAYAQDA-GAQGGGLMGFLPLILIFAVFYFMLIRPQMKRAKEHRKMVSELAKGDEVVTNGGLLGRITDLGDSFITLELADNVVIKVQRHAVATVMPKGTI 105
BLAST of mRNA_P-wetherbeei_contig18170.1.1 vs. uniprot
Match: I3CL03_9GAMM (Sec translocon accessory complex subunit YajC n=2 Tax=Beggiatoa TaxID=1021 RepID=I3CL03_9GAMM) HSP 1 Score: 142 bits (358), Expect = 7.020e-42 Identity = 65/109 (59.63%), Postives = 83/109 (76.15%), Query Frame = 1
Query: 1 MDYLIPNAWAQEAVGGAQGGLAGFLPLAILFLVFYLFLIRPQMKRQKEHAKLVRELAKGDEVVTTGGMLGRVTEVGANFVKLEIAKDTEVKVQKHAIAQVMPKGTVKEM 327
MD+LI NAWA+ A A GG A +PL ILF+VFY LIRPQ KR KEH K+V LAKGDE+VT GG+LG+VT +G NF+ +E+A + EVK+Q+ A+A VMPKGT+K +
Sbjct: 1 MDFLIQNAWAEGAAASAGGGFASLIPLVILFVVFYFLLIRPQTKRVKEHKKMVDSLAKGDEIVTQGGLLGKVTNLGDNFIAVEVAPNIEVKIQRQAVAAVMPKGTIKAL 109
BLAST of mRNA_P-wetherbeei_contig18170.1.1 vs. uniprot
Match: A0A7C1WAV9_9GAMM (Sec translocon accessory complex subunit YajC n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7C1WAV9_9GAMM) HSP 1 Score: 140 bits (353), Expect = 4.310e-41 Identity = 65/108 (60.19%), Postives = 83/108 (76.85%), Query Frame = 1
Query: 1 MDYLIPNAWAQEAV-GGAQGGLAGFLPLAILFLVFYLFLIRPQMKRQKEHAKLVRELAKGDEVVTTGGMLGRVTEVGANFVKLEIAKDTEVKVQKHAIAQVMPKGTVK 321
MD++IPNAWAQ A GG GL L L +LF+VFY LIRPQ KR KEH ++V LAKGDE+VT GG+LGR+ ++G NF+ LE+A +TEVKVQ+ ++A VMPKGT+K
Sbjct: 1 MDFIIPNAWAQAAPSGGGDAGLINILMLVVLFVVFYFLLIRPQTKRVKEHKQMVESLAKGDEIVTNGGLLGRIAQIGDNFIMLEVATNTEVKVQRQSVAAVMPKGTMK 108
BLAST of mRNA_P-wetherbeei_contig18170.1.1 vs. uniprot
Match: A0A7Y3HBI0_9GAMM (Sec translocon accessory complex subunit YajC n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y3HBI0_9GAMM) HSP 1 Score: 138 bits (348), Expect = 2.200e-40 Identity = 65/106 (61.32%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 1 MDYLIPNAWAQEAVGGAQGGLAGFLPLAILFLVFYLFLIRPQMKRQKEHAKLVRELAKGDEVVTTGGMLGRVTEVGANFVKLEIAKDTEVKVQKHAIAQVMPKGTV 318
MD+LI NA+AQ G QGGL FLPL ++F VFY LIRPQMKR KEH K+V ELAKGDEVVT GG+LG++T++ +FV L++A E+K+Q+HA+A VMPKGT+
Sbjct: 1 MDFLIANAYAQS--GQPQGGLMSFLPLILIFAVFYFMLIRPQMKRAKEHRKMVSELAKGDEVVTNGGLLGKITDINDSFVTLQLADSVEIKLQRHAVASVMPKGTM 104
BLAST of mRNA_P-wetherbeei_contig18170.1.1 vs. uniprot
Match: A0A3M0YHM7_9GAMM (Sec translocon accessory complex subunit YajC n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0YHM7_9GAMM) HSP 1 Score: 137 bits (345), Expect = 6.700e-40 Identity = 69/108 (63.89%), Postives = 82/108 (75.93%), Query Frame = 1
Query: 1 MDYLIPNAWAQEAVGGAQG-GLAGFLPLAILFLVFYLFLIRPQMKRQKEHAKLVRELAKGDEVVTTGGMLGRVTEVGANFVKLEIAKDTEVKVQKHAIAQVMPKGTVK 321
M + I +AWAQ G G G F+PL I+F+VFYL LIRPQMK+ KEH K+V LAKGDEVVT GG+LGR+TEVG NFV++EIA VKVQKHAIA +MPKGT+K
Sbjct: 1 MSFFISDAWAQA--GQQPGAGFMSFVPLIIIFVVFYLLLIRPQMKKAKEHRKMVESLAKGDEVVTNGGLLGRITEVGENFVEIEIADGVRVKVQKHAIASLMPKGTMK 106
BLAST of mRNA_P-wetherbeei_contig18170.1.1 vs. uniprot
Match: A0A7Y2YY28_9GAMM (Sec translocon accessory complex subunit YajC n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2YY28_9GAMM) HSP 1 Score: 137 bits (345), Expect = 6.900e-40 Identity = 64/107 (59.81%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 1 MDYLIPNAWAQEAVGGAQGGLAGFLPLAILFLVFYLFLIRPQMKRQKEHAKLVRELAKGDEVVTTGGMLGRVTEVGANFVKLEIAKDTEVKVQKHAIAQVMPKGTVK 321
+D+ I +A+AQ+ G GGL FLPL I+F++FY LIRPQMKR KEH KL+ EL GDEVVT GG+LGR+T+VG +FV +E A + +++VQKHAIA VMPKGT+K
Sbjct: 4 LDFFIASAYAQD--GAQPGGLMSFLPLIIIFVIFYFLLIRPQMKRAKEHKKLIAELGNGDEVVTNGGLLGRITKVGESFVTVEFADNIQIRVQKHAIASVMPKGTIK 108
BLAST of mRNA_P-wetherbeei_contig18170.1.1 vs. uniprot
Match: A0A1Z4VR82_9GAMM (Sec translocon accessory complex subunit YajC n=3 Tax=Thiohalobacter TaxID=1273155 RepID=A0A1Z4VR82_9GAMM) HSP 1 Score: 137 bits (345), Expect = 7.560e-40 Identity = 64/108 (59.26%), Postives = 81/108 (75.00%), Query Frame = 1
Query: 1 MDYLIPNAWAQEAVGGAQGGLAGFLPLAILFLVFYLFLIRPQMKRQKEHAKLVRELAKGDEVVTTGGMLGRVTEVGANFVKLEIAKDTEVKVQKHAIAQVMPKGTVKE 324
+D+ I AWAQEA G L FLPL ++F+VF+ LIRPQ K+ KEH +V L KGDEVVT GG+LGR+TEVG NFV L+IA + E+KVQ+HA+A +MPKGTVK+
Sbjct: 5 LDFFISPAWAQEAPAGQPDPLMSFLPLILIFVVFWFLLIRPQQKKVKEHKAMVEALGKGDEVVTNGGVLGRITEVGDNFVTLKIADNVEIKVQRHAVASLMPKGTVKD 112
BLAST of mRNA_P-wetherbeei_contig18170.1.1 vs. uniprot
Match: A0A1G0KD00_9GAMM (Sec translocon accessory complex subunit YajC n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0KD00_9GAMM) HSP 1 Score: 135 bits (339), Expect = 5.330e-39 Identity = 64/109 (58.72%), Postives = 82/109 (75.23%), Query Frame = 1
Query: 1 MDYLIPNAWAQEAVGGAQGGLAGFLPLAILFLVFYLFLIRPQMKRQKEHAKLVRELAKGDEVVTTGGMLGRVTEVGANFVKLEIAKDTEVKVQKHAIAQVMPKGTVKEM 327
MD+L+ NAWAQ A GG +G + IL VFY LIRPQMK+ K H K+V LAKGDEVVT+GG+LGR++E+G +F+ LE+AKD +VKVQKHA++ VMPKGT K +
Sbjct: 1 MDFLVNNAWAQGAPQPG-GGASGLIMFVILIAVFYFILIRPQMKQAKSHKKMVESLAKGDEVVTSGGLLGRISEIGDSFILLEVAKDVQVKVQKHAVSAVMPKGTAKTL 108
BLAST of mRNA_P-wetherbeei_contig18170.1.1 vs. uniprot
Match: A0A7Y2YCJ7_9GAMM (Sec translocon accessory complex subunit YajC n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2YCJ7_9GAMM) HSP 1 Score: 134 bits (338), Expect = 8.030e-39 Identity = 63/107 (58.88%), Postives = 81/107 (75.70%), Query Frame = 1
Query: 1 MDYLIPNAWAQEAVGGAQGGLAGFLPLAILFLVFYLFLIRPQMKRQKEHAKLVRELAKGDEVVTTGGMLGRVTEVGANFVKLEIAKDTEVKVQKHAIAQVMPKGTVK 321
+D+ I +A AQ+A GGL FLPL I+F++FY LIRPQMKR KEH KLV ELA GDE+VT GG+LGR+T VG +FV +E+ + +KVQ+HA+A VMPKGT+K
Sbjct: 4 LDFFIASAHAQDAA--QPGGLMSFLPLIIIFVIFYFLLIRPQMKRAKEHKKLVSELANGDEIVTNGGLLGRITNVGESFVTVELTDNVRIKVQRHAVASVMPKGTIK 108
BLAST of mRNA_P-wetherbeei_contig18170.1.1 vs. uniprot
Match: A7C3I5_9GAMM (Sec translocon accessory complex subunit YajC n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7C3I5_9GAMM) HSP 1 Score: 134 bits (337), Expect = 1.110e-38 Identity = 63/107 (58.88%), Postives = 82/107 (76.64%), Query Frame = 1
Query: 1 MDYLIPNAWAQEAVGGAQGGLAGFLPLAILFLVFYLFLIRPQMKRQKEHAKLVRELAKGDEVVTTGGMLGRVTEVGANFVKLEIAKDTEVKVQKHAIAQVMPKGTVK 321
MD+LI NAWAQ A G GL + L +LFLVFY LIRPQ KR KEH ++V LAKGDEVVT GG+LG++T++G NF+ LE++ +TE+KVQ+ ++A VMPKGT+K
Sbjct: 1 MDFLIQNAWAQAA-GQGDAGLINLIMLVVLFLVFYFLLIRPQTKRVKEHKQMVESLAKGDEVVTNGGLLGKITQLGDNFMTLEVSANTEIKVQRQSVAAVMPKGTLK 106 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18170.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18170.1.1 >prot_P-wetherbeei_contig18170.1.1 ID=prot_P-wetherbeei_contig18170.1.1|Name=mRNA_P-wetherbeei_contig18170.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp MDYLIPNAWAQEAVGGAQGGLAGFLPLAILFLVFYLFLIRPQMKRQKEHAback to top mRNA from alignment at P-wetherbeei_contig18170:393..722+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18170.1.1 ID=mRNA_P-wetherbeei_contig18170.1.1|Name=mRNA_P-wetherbeei_contig18170.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig18170:393..722+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18170:393..722+ >mRNA_P-wetherbeei_contig18170.1.1 ID=mRNA_P-wetherbeei_contig18170.1.1|Name=mRNA_P-wetherbeei_contig18170.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig18170:393..722+ (Phaeothamnion wetherbeei SAG_119_79)back to top |