mRNA_P-wetherbeei_contig181.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig181.1.1
Unique NamemRNA_P-wetherbeei_contig181.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig181.1.1 vs. uniprot
Match: D8LM25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM25_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 1.180e-93
Identity = 184/371 (49.60%), Postives = 248/371 (66.85%), Query Frame = 1
Query:    1 MSRMGFMDKAKEIDLLIEKERARLKQEREASEEEIQKLKLGGLERAHTRRVEALALQQVKRLNSADHVTEPARELEELRAKQKRDYDIIIAETATRATGGVSSCTCVDEYMCRHNKSASYNTRKPTKDVIRLRQNAQRLRSSGREEEAEEMEARAVHLEAAAEEAWRAAVEVTVISSAWAGGKSRLEQLVEQQHRTAAMLEETHSEKLALLKQQQAIDRRNLLSTLAAERKKVIVYCRREALRRSVVDVVERHKERRHLSMHKSDGLKNVSQNMFGADGPDGRGDGGGTNXXXXXXXXXXXXXXXXXXXXXXDSSGWQAPQRAGLNNSSSIAGYDALKSGTFYDDMGASSVGAAAYNFDGTLKTTGSKAMD 1113
            M+RMGF+DKA+E+D+++E ERARLK+ER+  ++ +   K+ GL  +HTRR  A+      R+ S   + + A E+E+L+ KQK++YD+++ ETATRATGGVSSC C D + CRHNKSASYNTRKPTKDVIRLRQN QRLR+SGR  EA+E++  AV +E  AE+ WR  VE +++SSAW GGKSRLEQ+VE+Q  T   L  TH+EKLA LKQQ  ++RRNL+STLAAERKKVI+YCRREA +R   D+    KE R ++ HKSDG++NVS+NMF  D  D + D                              GW+ P   G++NS +++ Y+ + SG  +  +   + GA     DG LKT+GS+AMD
Sbjct:    1 MARMGFLDKAEELDVMVEAERARLKKERDQQDQAVLDQKMNGLRMSHTRRSAAMTSAHEARIASL--LEKCATEIEDLKVKQKKEYDVLVGETATRATGGVSSCVCTDPFKCRHNKSASYNTRKPTKDVIRLRQNGQRLRASGRLAEADEVDNMAVAIEKLAEDQWRKRVEESILSSAWCGGKSRLEQMVERQQATLRALMSTHTEKLARLKQQDRLERRNLVSTLAAERKKVILYCRREATKRRTKDIAAGAKEARTMNAHKSDGMQNVSKNMF-KDSDDSQSD---------------------IDSEDDRLEGWKPPTACGVDNSKALSSYEDIASGNVHKKLADGTFGAEEGGADGGLKTSGSRAMD 347          
BLAST of mRNA_P-wetherbeei_contig181.1.1 vs. uniprot
Match: A0A836CAU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU2_9STRA)

HSP 1 Score: 243 bits (619), Expect = 4.120e-72
Identity = 158/357 (44.26%), Postives = 213/357 (59.66%), Query Frame = 1
Query:    1 MSRMGFMDKAKEIDLLIEKERARLKQEREASEEEIQKLKLGGLER-------AHTRRVEALALQQVKRLNSADHVTEPARELEELRAKQKRDYDIIIAETATRATGGVSSCTCVDEYMCRHNKSASYNTRKPTKDVIRLRQNAQRLRSSGREEEAEEMEARAVHLEAAAEEAWRAAVEVTVISSAWAGGKSRLEQLVEQQHRTAAMLEETHSEKLALLKQQQAIDRRNLLSTLAAERKKVIVYCRREALRRSVVDVVERHKERRHLSMHKSDGLKNVSQNMFGADGPDGRGDGGGTNXXXXXXXXXXXXXXXXXXXXXXDSSG----WQAPQRAGLNNSSSIAGYDALKSGTFYDDM 1038
            M+RMGF+DKAKE++ +IE+ER  + +ERE  E+ I   KL  L +        H RR+ AL  +  + L     + + A+EL + + K +R+Y+ +I ETA RA GGVSSC C   Y+CRHNK+ASYNTRKPT+DVI LRQNA+RLR++GR EEAEE + +A  ++  A++ WR  VE +++SSAW+GGKSRLEQLVE+Q      +EETH  KL L+K+QQ I           ERKKVI+YCRR AL+R   D+ E   E R +   KSDG+KN+S+NM  A  PD                               DS G    W AP  +G  NS +IA Y+ LK+G  Y ++
Sbjct:   43 MARMGFLDKAKEVENVIERERVTMLKEREEREQSILSQKLSSLGKYHHAKAMGHRRRLVALESRLTRELQQ--FLGKCAKELSDTKDKHRREYEALIEETAQRAYGGVSSCQCRKRYLCRHNKTASYNTRKPTRDVISLRQNAERLRATGRIEEAEEFDRQAQAIDDKADKDWRTRVEQSIVSSAWSGGKSRLEQLVERQQHQLRSVEETHEAKLELVKKQQEIXXXXXXXXXXXERKKVIMYCRRAALKRMTRDIKEEADEDRRIMAQKSDGMKNLSRNMVKA--PD-------------------------DSDSDEDSEGQAIDWIAPTTSGTTNSEAIAKYEDLKTGKIYTEL 370          
BLAST of mRNA_P-wetherbeei_contig181.1.1 vs. uniprot
Match: A0A6H5JNT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNT6_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 8.460e-70
Identity = 167/380 (43.95%), Postives = 211/380 (55.53%), Query Frame = 1
Query:    1 MSRMGFMDKAKEIDLLIEKERARLKQEREASEEEIQKLKLGGLERAHTRRVEALALQQVKRLNSADHVTEPARELEELRAKQKRDYDIIIAETATRATGGVSSCTCVDEYMCRHNKSASYNTRKPTKDVIRLRQNAQRLRSSGREEEAEEMEARAVHLEAAAEEAWRAAVEVTVI--------------SSAWAGGKSRLEQLVEQQHRTAAMLEETHSEKLALLKQQQAIDRRNLLSTLAAERKKVIVYCRREALRRSVVDVVERHKERRHLSMHKSDGLKNV--SQNMFGADGPDGRG-----DGGGTNXXXXXXXXXXXXXXXXXXXXXXDSSG-------------WQAPQRAGLNNSSSIAGYDALKSGTFYDDM 1038
            M+RMGF+DKA+E+++ IE ER + ++ERE  E+ I   KLGGL+ +H RR   + L+  +    A    +      ELR K KR+YD++I ETA RA GGVSSC C   Y+CRHNK+ASYNTRKPT++VIRLRQNA+RLR++GR EEAEE E +A  L+ A ++ WR  VE                  +SAW+GGKSRLEQLVE+Q  T   LEETH  K  LL +QQ I RRNL ST  AERKKV +YCRR AL+R   D+ E   E R    +KSDG+ NV       GA     R         G                        DS+              W AP   G+NNS +I  YD LK+G  Y +M
Sbjct:   89 MARMGFLDKAREVEVWIESERLKTQKEREEKEQAILAQKLGGLDISHRRRF--IGLENKQGEGEAQFRAKXXXXXXELRLKHKREYDMLIEETAQRAYGGVSSCQCEKTYLCRHNKTASYNTRKPTREVIRLRQNAERLRATGRVEEAEEFEIQAQDLDDACDKQWRTRVEQRAKPYACSFLHRTSLWRTSAWSGGKSRLEQLVEKQQHTVKSLEETHEAKYELLVKQQDIQRRNLKSTFEAERKKVAMYCRRAALKRMTRDIKEDADEERRTMANKSDGMDNVFLGNARQGAIHTSIRELLVYLSAEGREHDELASAPPSCEPESSSDDSSLDSAARKKKNELKQAAANWVAPTSTGVNNSEAIVKYDDLKTGKIYSEM 466          
BLAST of mRNA_P-wetherbeei_contig181.1.1 vs. uniprot
Match: A0A835Z9J4_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9J4_9STRA)

HSP 1 Score: 240 bits (612), Expect = 5.130e-67
Identity = 182/462 (39.39%), Postives = 232/462 (50.22%), Query Frame = 1
Query:   31 KEIDLLIEKERARLKQEREASEEEIQKLKLGGLERAHTRRVEALALQQVKRLNSADHVTEPARELEEL------------------------------------------RAKQKRDYDIIIAETATRATGGVSSCTCVDEYMCRHNKSASYNTRKPTKDVIRLRQNAQRLRSSGREEEAE--------------------------------EMEARAVHLEAAAEEAWRAAVEVTVISSAWAGGKSRLEQLVEQQHRTAAMLEETHSEKLALLKQQQAIDRRNLLSTLAAERKK-------------VIVYCRREALRRSVV--------------DVVERHKERRHLSMHKSDGLKNVSQNMFGADGPDGRGDGGGTNXXXXXXXXXXXXXXXXXXXXXXDSSGWQAPQRAGLNNSSSIAGYDALKSGTFYDDMGASSVGAAAYNFDGTLKTTGSKAMD 1113
            K+ID  I+ ER RLK ERE  E  +   +L GLE AH RR+ AL  +  + L S       A+EL++                                           RAKQKR Y++++ ETATRATGG+SSCTC D Y CRHNKSASY+TRKPT+DVIRLRQNAQRLR+SGR+EEAE                                EME +A   E AAE AWRA VE  ++SSAWAGGKSRLEQ+VE+Q    A LEETH E+ AL ++   I RRNLL+TL AER+              ++  C+RE  RR  V              DV    +ERR L  HKSDGLKNVS+N  G+   D                                  GWQAP  AG++NS +I     +++GT +  + A++  AA+ +    ++TTGS+AMD
Sbjct:  190 KDIDDRIDAERQRLKAEREGKEASLMVHRLAGLELAHKRRITALEARLAEELRSL--AARQAQELDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASALLCSGLLVVTRAKQKRQYELLVGETATRATGGISSCTCADAYACRHNKSASYSTRKPTRDVIRLRQNAQRLRASGRQEEAESRGRRGLGGSEAPECARAAGERKCGGAHLLACEMENKAADAERAAEAAWRARVEAAIVSSAWAGGKSRLEQMVERQQAVVAALEETHGERAALARKNHGILRRNLLATLNAERRXXXXXXXXXXXXXXMVPRCKREGQRRYQVXXXXXXXXXXXXXXDVAAAARERRKLGQHKSDGLKNVSRNFAGSGSDD---------------------DDSYDEKKDERLEGWQAPAHAGVHNSQAIVSAHDVRAGTAHAALRAAA--AASASAGSVIETTGSRAMD 626          
BLAST of mRNA_P-wetherbeei_contig181.1.1 vs. uniprot
Match: A0A6H5KND4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KND4_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 2.180e-56
Identity = 151/374 (40.37%), Postives = 197/374 (52.67%), Query Frame = 1
Query:  118 LGGLERAHTRRVEALALQQVKRLNSADHVTEPARELEELRAKQKRDYDII-----------IAETATRATGGVSSCTCVDEYMCRHNKSASYNTRKPTKDVIRLRQNA---------------------QRLRSSGREEEAEEMEARAVHLEAAAEEAWRAAVEVTVISSAWAGGKSRLEQLVEQQHRTAAMLEETHSEKLALLKQQQAIDRRNLLSTLAAERKKVIVYCRREALRRSVVDVVERHKERRHLSMHKSDGLKNVSQNMFGADGPDGRGDGGGTNXXXXXXXXXXXXXXXXXXXXXXDSSGWQAPQRAGLNNSSSIAGYDALKSGTFYDDMGASS----------VGAAAYNFDGTLKTTGSKAMD 1113
            + GL  +HTRR  A+   Q  R+ S   + + A E+E+L+ KQK++YD++           + ETATRATGGVSSC C D + CRHNKSASYNTRKPTKDVIRLRQN                      QRLR+SGR  EA+E++  AV +E  AEE WR  VE +++SSAW GGKSRLEQ+VE+Q  T   L  TH+EKLA LKQQ  +                     REA +R   D+    KE R L+ HKSDG++NVS+NMF  D  D + D                              GW+ P   G++NS +++ Y+ + SG      GA++           GA     DG LKT+GS+AMD
Sbjct:    1 MNGLRMSHTRRSAAMTSAQEARIASL--LEKCAAEIEDLKDKQKKEYDVLASTNFVHCSMWVGETATRATGGVSSCVCTDPFKCRHNKSASYNTRKPTKDVIRLRQNVSRPRHSPAEPPLMWLFFVSRGQRLRASGRLAEADEVDNMAVAIEKLAEEQWRKRVEESILSSAWCGGKSRLEQMVERQQATLQALMSTHTEKLARLKQQDRL---------------------REATKRRTKDIAAGAKEARKLNAHKSDGMQNVSKNMF-KDSDDSQSD---------------------IDSEDDRLEGWKPPTACGVDNSKALSSYEDIASGNVRTSPGAANQVHKKLADGTFGAEEGGVDGGLKTSGSRAMD 329          
BLAST of mRNA_P-wetherbeei_contig181.1.1 vs. uniprot
Match: A0A836CD74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD74_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.040e-33
Identity = 94/236 (39.83%), Postives = 135/236 (57.20%), Query Frame = 1
Query:    1 MSRMGFMDKAKEIDLLIEKERARLKQEREASEEEIQKLKLGGLERAHTRRVEALALQQVKRLNSADHVTEPARELEELRAKQKRDYDIIIAETAT--RATGGVSSCTCVDEYMCRHNKSASYNTRKPTKDVIRLRQNAQRLRSSGREEEAEEMEARAVHLEAAAEEAWRAAVEVTVISSAWAGGKSRLEQLVEQQHRTAAMLEETHSEKLALLKQQQAIDRRNLLSTLAAERKKVI 702
            ++R+GF +KA EID +++K R  LK ER A +E +  ++L  L+ AH  R EAL     +R+   +         E+ R ++K D + +   TA   RA G   SC+C  +Y+C HNK+ASYNTR+P KDVI  R+NA RL+  GR EEA+  E +A  L+A   E WR  V  ++ +SAW G  S L+ L E+       LE   S +  L+    A+ RRNL +T+A E KKV+
Sbjct:   90 VARLGFPEKAMEIDEMVQKIRDDLKTERAAEDERVLMVELERLQEAHAARAEALE----QRIGEEEQQMRGKFCEEQRRLRKKHDSEFLDLVTAATKRAIGRSKSCSCTKKYLCTHNKTASYNTRRPKKDVIHYRRNASRLKHGGRLEEAKAWEEKAAELDARHLEQWREHVARSLAASAWGGSSSALDHLGERHQHELEQLEVGQSNRWRLMTMHHAVLRRNLGNTMAVEVKKVV 321          
BLAST of mRNA_P-wetherbeei_contig181.1.1 vs. uniprot
Match: D7G884_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G884_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 3.640e-22
Identity = 83/248 (33.47%), Postives = 132/248 (53.23%), Query Frame = 1
Query:    1 MSRMGFMDKAKEIDLLIEKERARLKQEREASEEEIQKLKLGGLERAHTRRVEALALQQVKRLNSADHVTEPARELEELRAKQKRDYDIIIAETATRATGGVSSCTCVDEYMCRHNKSASYNTRKPTKDVIRLRQNAQRLRSSGREEEAEEMEARAVHLEAAAEEAWRAAVEVTVISSAWAGGKSRLEQLVEQQHRTAAMLEETHSEKLALLKQQQAIDRRNLLSTLAAERKKVIVYCRREALRRSVVD 744
            ++R+GF DKA EID  IEK RA L+ ERE  +  I + +L  L   H  ++ +L  +  +         E  RE   L  KQ++ +  ++ +   RA G         +Y+C HNK+AS+NTR+P K+VI  R+NA+RLR  GR +E+   E +A  L+A   ++WR  V  ++ +SAW G  S L+QL  +  R  + +E   +    L+  +    RRN  + +  ERKK +     E + R+V++
Sbjct:   17 VARLGFPDKAMEIDEHIEKIRADLRSEREKVDSRILEEELAALAIQHREKLASLEQELKEDEQKVSRSFE--RERAVLLRKQEKQFVQLVDDAIKRAIGKSK------KYLCHHNKTASFNTRRPKKEVIHFRKNAKRLRHGGRLDESAAWEEKAAELDANHLDSWREEVAASLTASAWGGSSSALDQLATEHQREISRMETAQANGWTLMLMRHQTARRNCHNVIMVERKKDV-----EGMLRNVIE 251          
BLAST of mRNA_P-wetherbeei_contig181.1.1 vs. uniprot
Match: A0A6C0BWQ3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BWQ3_9ZZZZ)

HSP 1 Score: 84.0 bits (206), Expect = 5.040e-14
Identity = 56/204 (27.45%), Postives = 107/204 (52.45%), Query Frame = 1
Query:    1 MSRMGFMDKAKEIDLLIEKERARLKQEREASEEEIQKLKLGGLERAHTRRVEALALQQVKRLNSADHVTEPARELEELRAKQKRDYDIIIAETATRATGGVSSCTCVDEYMCRHNKSASYNTRKPTKDVIRLRQNAQRLRSSGREEEAEEMEARAVHLEAAAEEAWRAAVEVTVISSAWAGGKSRLEQLVEQQHRTAAMLEETH 612
            +SR+GF +KA  +D  IE  R + K  R+A EE++    L  L + + R+ + L    V +    +              K + ++  II     ++ G + SC C ++Y+C HNK++S+N RKP   VI  R+N++RL+  GR E+A ++E +A  ++  ++  W+  +  +++ S W   +  +++ +E   +    +E+TH
Sbjct:   86 ISRLGFAEKAYALDKQIEVMREKAKVVRKAEEEKLMAEMLETLHKKNERKQQRL--DAVIKQEHDEXXXXXXXXXXXXIEKHRTEFLKIIENAERKSIGKIKSCNCENDYLCHHNKTSSWNIRKPKPIVILYRKNSKRLKQGGRTEDAIQIEEKADEIDYESQIEWKKNIATSIVQSPWNANEPIIDRTIENHKKELETMEKTH 287          
BLAST of mRNA_P-wetherbeei_contig181.1.1 vs. uniprot
Match: D7G7B2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7B2_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 4.720e-12
Identity = 64/172 (37.21%), Postives = 77/172 (44.77%), Query Frame = 1
Query:  523 ISSAWAGGKSRLEQLVEQQHRTAAMLEETHSEKLALLKQQQAIDRRNLLSTLAAERKKVIVYCRREALRRSVVDVVERHKERRHLSMHKSDGLKNVSQNMFGADGPDGRGDGGGTNXXXXXXXXXXXXXXXXXXXXXXDSSGWQAPQRAGLNNSSSIAGYDALKSGTFYDDM 1038
            I+SAW+GGKSRLEQLVE+Q  T   LEETH  K  LL +QQ I RRNL ST  AERKKV +    +    S +D   R K        K+D LK  + N                                           W AP   G+NNS +I  YD LK+G  Y +M
Sbjct:   13 ITSAWSGGKSRLEQLVEKQQHTVKSLEETHEAKYELLVKQQDIQRRNLKSTFEAERKKVAIESSSDD---SSLDSAARKK--------KND-LKQAAAN-------------------------------------------WVAPTSTGVNNSEAIVQYDDLKTGKIYSEM 129          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig181.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LM25_ECTSI1.180e-9349.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CAU2_9STRA4.120e-7244.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JNT6_9PHAE8.460e-7043.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z9J4_9STRA5.130e-6739.39SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5KND4_9PHAE2.180e-5640.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CD74_9STRA1.040e-3339.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G884_ECTSI3.640e-2233.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6C0BWQ3_9ZZZZ5.040e-1427.45Uncharacterized protein n=1 Tax=viral metagenome T... [more]
D7G7B2_ECTSI4.720e-1237.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig181contigP-wetherbeei_contig181:949..3419 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1122
Hectar predicted targeting categoryother localisation
Exons5
Cds size1122
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186136.146953-CDS-P-wetherbeei_contig181:948..10261683186136.146953-CDS-P-wetherbeei_contig181:948..1026Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig181 949..1026 +
1683186136.1577706-CDS-P-wetherbeei_contig181:1464..15981683186136.1577706-CDS-P-wetherbeei_contig181:1464..1598Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig181 1465..1598 +
1683186136.1689746-CDS-P-wetherbeei_contig181:1887..20801683186136.1689746-CDS-P-wetherbeei_contig181:1887..2080Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig181 1888..2080 +
1683186136.1836207-CDS-P-wetherbeei_contig181:2293..25091683186136.1836207-CDS-P-wetherbeei_contig181:2293..2509Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig181 2294..2509 +
1683186136.1938634-CDS-P-wetherbeei_contig181:2918..34191683186136.1938634-CDS-P-wetherbeei_contig181:2918..3419Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig181 2919..3419 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig181.1.1prot_P-wetherbeei_contig181.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig181 949..3419 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig181.1.1

>prot_P-wetherbeei_contig181.1.1 ID=prot_P-wetherbeei_contig181.1.1|Name=mRNA_P-wetherbeei_contig181.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=374bp
MSRMGFMDKAKEIDLLIEKERARLKQEREASEEEIQKLKLGGLERAHTRR
VEALALQQVKRLNSADHVTEPARELEELRAKQKRDYDIIIAETATRATGG
VSSCTCVDEYMCRHNKSASYNTRKPTKDVIRLRQNAQRLRSSGREEEAEE
MEARAVHLEAAAEEAWRAAVEVTVISSAWAGGKSRLEQLVEQQHRTAAML
EETHSEKLALLKQQQAIDRRNLLSTLAAERKKVIVYCRREALRRSVVDVV
ERHKERRHLSMHKSDGLKNVSQNMFGADGPDGRGDGGGTNGKGGPGGGGP
SGGGGGSAAGGTDSSGWQAPQRAGLNNSSSIAGYDALKSGTFYDDMGASS
VGAAAYNFDGTLKTTGSKAMDDAR
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mRNA from alignment at P-wetherbeei_contig181:949..3419+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig181.1.1 ID=mRNA_P-wetherbeei_contig181.1.1|Name=mRNA_P-wetherbeei_contig181.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2471bp|location=Sequence derived from alignment at P-wetherbeei_contig181:949..3419+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCCGGATGGGCTTCATGGACAAGGCCAAGGAGATCGACCTCCTAAT CGAGAAGGAGCGTGCCCGGCTCAAGCAGGTGGGACGAGAGAGAGTAGGGA ATGAAATGCGGCGTTTCTGTCTGGTGGCACCGTTATCAGTAACCGTGTTT CTGTTTGCGGGCTGCTTCGGTTGATCAGAAAGGAGCCGCGCTTGTGCCAC TGTAATTCCAGTGCAGCGACACTCTCCCTTGTGGCTGTCTCTGTTGTAAC GGCGTCAGTTTCAGAACCTACCCTACCGAGTGGTTCCATGGAGGGAGCAT TATTTTTATTCATAGCCCATTGGCCTTGCTGATTCACAGCATAAATCCCT TTCAAACTCTCTTTGCTCGATGCGATCTCTTTCTCTTTCCATATGGTGAC GACGACGGCTGCTGCGGCGTCGACGGCGGCCACGGCTGCGGTGCCGACGG CGATGGTGGCGGCGATGATGGCGGCGGCCATAAAAACGGCAACGATGGCG GCGGCGGCGGCTGCAGGAGCGGGAGGCGAGCGAGGAGGAGATCCAAAAGC TAAAGCTGGGGGGCCTTGAGCGGGCTCACACCCGCCGAGTCGAAGCGCTC GCCCTCCAACAGGTAAAGAGGTTGAACTCAGCCGACCATGTCACTGAGCC GTGTCGGCGGCGCATTTAGACGAAGAGGAATGTCGGTTGCGTTGGCATGT TTCGGTGCGTCTGCTGCGGCTGACGCCGGTTCGTATGCATCATACGCATC GCCTTATTTTTCTCCCGGCAGCTCGCCTTTTTCGCTGCAGCAGCAGTCAT AACCTAAATCTGATGTTCTCGCGGCTTTCCGATTTTCTGCCGTGCCTGGC CCTCGCTGCCTTGCTCCTTTGCTGCCATCGCCACCACCACACTTTTCATC GCCTCAGGCGGAGGTGATCAAGCAGCGGCAGGCGGCGAGGGCCCGAGAGC TGGAGGAGCTGCGCGCGAAGCAGAAGCGCGACTACGACATCATCATCGCC GAGACGGCGACGCGGGCGACGGGCGGCGTGTCGAGCTGCACGTGCGTCGA TGAGTACATGTGCCGCCACAACAAAAGCGCCTCGTACAACACGCGCAAGC CCACCAAGGACGTCATCCGCCTCCGACAAAACGTGAGTAGAGCTGAGCGG GATAGGGAGTGGGTCGGGACAGCTGGAAGGGGCCGTCTGCAGTCTTCCAT GCTGCTGCGCGGAAGAATTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG CTGCTGCTGCCGCCGCCACTTTCCTGTGGGGGCGGTTCGGATGAAACTTC GGCCCGCCAGTGTGACCAAACGAAAAGCAATGATTTTTATTCCAGGCCCA GCGATTGCGGTCATCGGGCCGTGAGGAGGAGGCCGAAGAGATGGAGGCCA GGGCCGTGCATCTGGAGGCGGCGGCTGAGGAGGCGTGGCGGGCAGCCGTC GAGGTGACGGTCATCAGCAGTGCGTGGGCCGGCGGCAAGAGCCGCCTGGA GCAGCTCGTAGAGCAACAGCACAGGACCGCCGCCATGCTCGAGGAGACCC ACTCGGAGAAGGTTAGTTAGATAACGTAAGCATGCGTGCGGTCGGTACGG GTTTTTAATGGGGGTTGGCTTTGTGGTATCACATTCTGTCTTGATGCAGT ACGTGTCGTTTGCAGTGCGCTTCTTCGAGCTGTAAGGTTTGCGATATGAT TTTGTGTGGCGAGGCCTACGTGGCACCGTTTGCCACTGACCAGCTGTATC CAGCTTTTATTGCTGGTGGCAGCACTTCTTGAACCGGCAGCCTGTCGTAA CCTCTGTTCGCTCCTCTTTTGTCTCTGAGCCTGGGAGATAGACAACCTGG CAGACCTCTCGTGTTTTGGCTGTTCCAGAGTCGAATTCTTGAATCTTCCT CAATTCCACAGTAATACCCGCTGCCACATTTGCAAAACTTATGATAGTTA CCGCCGCCATCCTGATGCAGTTGGCGCTGCTGAAGCAGCAGCAGGCGATC GATCGCCGCAACCTGCTGTCGACGCTCGCCGCCGAGCGCAAAAAGGTCAT CGTGTACTGCCGCCGCGAGGCGCTCCGTCGCAGCGTCGTCGACGTCGTCG AGCGCCATAAGGAGCGCCGCCACCTCAGCATGCACAAGTCAGATGGCCTC AAAAATGTCAGCCAAAACATGTTCGGCGCCGATGGCCCAGACGGCCGCGG CGATGGGGGCGGCACTAACGGCAAAGGCGGGCCGGGCGGCGGCGGGCCCA GCGGTGGCGGCGGTGGCAGCGCTGCCGGTGGCACCGACTCGAGCGGGTGG CAGGCACCGCAGCGAGCGGGGCTGAACAACAGCAGCAGCATTGCCGGCTA CGACGCGCTGAAGTCGGGCACATTTTACGATGACATGGGCGCGTCCTCGG TCGGTGCAGCGGCTTACAACTTCGACGGGACGCTGAAGACCACCGGTTCC AAGGCAATGGACGACGCACGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig181:949..3419+

>mRNA_P-wetherbeei_contig181.1.1 ID=mRNA_P-wetherbeei_contig181.1.1|Name=mRNA_P-wetherbeei_contig181.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1122bp|location=Sequence derived from alignment at P-wetherbeei_contig181:949..3419+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCCGGATGGGCTTCATGGACAAGGCCAAGGAGATCGACCTCCTAAT
CGAGAAGGAGCGTGCCCGGCTCAAGCAGGAGCGGGAGGCGAGCGAGGAGG
AGATCCAAAAGCTAAAGCTGGGGGGCCTTGAGCGGGCTCACACCCGCCGA
GTCGAAGCGCTCGCCCTCCAACAGGTAAAGAGGTTGAACTCAGCCGACCA
TGTCACTGAGCCGGCCCGAGAGCTGGAGGAGCTGCGCGCGAAGCAGAAGC
GCGACTACGACATCATCATCGCCGAGACGGCGACGCGGGCGACGGGCGGC
GTGTCGAGCTGCACGTGCGTCGATGAGTACATGTGCCGCCACAACAAAAG
CGCCTCGTACAACACGCGCAAGCCCACCAAGGACGTCATCCGCCTCCGAC
AAAACGCCCAGCGATTGCGGTCATCGGGCCGTGAGGAGGAGGCCGAAGAG
ATGGAGGCCAGGGCCGTGCATCTGGAGGCGGCGGCTGAGGAGGCGTGGCG
GGCAGCCGTCGAGGTGACGGTCATCAGCAGTGCGTGGGCCGGCGGCAAGA
GCCGCCTGGAGCAGCTCGTAGAGCAACAGCACAGGACCGCCGCCATGCTC
GAGGAGACCCACTCGGAGAAGTTGGCGCTGCTGAAGCAGCAGCAGGCGAT
CGATCGCCGCAACCTGCTGTCGACGCTCGCCGCCGAGCGCAAAAAGGTCA
TCGTGTACTGCCGCCGCGAGGCGCTCCGTCGCAGCGTCGTCGACGTCGTC
GAGCGCCATAAGGAGCGCCGCCACCTCAGCATGCACAAGTCAGATGGCCT
CAAAAATGTCAGCCAAAACATGTTCGGCGCCGATGGCCCAGACGGCCGCG
GCGATGGGGGCGGCACTAACGGCAAAGGCGGGCCGGGCGGCGGCGGGCCC
AGCGGTGGCGGCGGTGGCAGCGCTGCCGGTGGCACCGACTCGAGCGGGTG
GCAGGCACCGCAGCGAGCGGGGCTGAACAACAGCAGCAGCATTGCCGGCT
ACGACGCGCTGAAGTCGGGCACATTTTACGATGACATGGGCGCGTCCTCG
GTCGGTGCAGCGGCTTACAACTTCGACGGGACGCTGAAGACCACCGGTTC
CAAGGCAATGGACGACGCACGT
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