mRNA_P-wetherbeei_contig179.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig179.3.2 vs. uniprot
Match: A0A835YN95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN95_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.200e-48 Identity = 118/294 (40.14%), Postives = 172/294 (58.50%), Query Frame = 1
Query: 181 ETDFLRWFSVREG-LAPAVSVAAFPSFGRGLLATQDVAAGEVLVSAPAGLVISQPHLATSANLPQEEKDVYATLRGDGGGEAIALFLMKQRALAEASEWRPYLACLPTAVPQTCIFAAGDLALLEDPRMASTAAARRNDTARRYSLLAPVLRRLLGA------EVAAGEDGSIERFRWALSVVESRALTFRGEKMLVPLADMVNHYPHPELRRHEAGEFFAAHHVVRADGGV---TVLADRPIAAGQQVFEDYGDNPDEASEVIYITYHGFVPREKNAFDCIHLELNLRRAAAY 1032
E FLRW LA +S+ +GRG+L ++ + A + L++ P L+IS + +S L +EE DV+ LR DG I FL++++AL +AS W PYL LP A+P+ ++A +L LLED + A + + + +++ P L RLL A + AA S E + WA +V+SRALTF+G++ L+P +D +N+ PH + R + G FF HH++ G TVL DR AG QVFEDYGDNP+ VIY+ YHGFVP ++N FDC+ +E LRR A+
Sbjct: 29 ERRFLRWLKNNGAVLADGISIDKV-EWGRGVLTSKPLKAKDTLLTLPEHLIISAQAIVSSDRLTEEEIDVFKGLRYDGA--IITTFLVREKALGKASFWHPYLDLLPDAIPRPANWSADELELLEDAAIQIDAMSDQQRLQQAHAVSLPALDRLLQALPASLRKRAAPVMHSFETYAWADGIVQSRALTFQGQRRLIPFSDFLNYAPHHQARPYSNGAFFLEHHLLFWQGSAMTATVLVDRDTPAGSQVFEDYGDNPN----VIYLLYHGFVPAQRNPFDCVSME--LRRPTAH 313
BLAST of mRNA_P-wetherbeei_contig179.3.2 vs. uniprot
Match: A0A7S1CRG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CRG8_9STRA) HSP 1 Score: 160 bits (405), Expect = 7.380e-40 Identity = 105/276 (38.04%), Postives = 153/276 (55.43%), Query Frame = 1
Query: 190 FLRWFSVREGLAPAVSVAAFPSFGRGLLATQDVAAGEVLVSAPAGLVISQPHLATSANLPQEEKDVYATLRGDGGGEA--IALFLMKQRALAEASEWRPYLACLPTAVPQTCIFAAGDLALLEDPRMASTAAARRNDTARRYS-LLAPVLRRLLGAEVAAGEDGSIERFRWALSVVESRALTFRGEKMLVPLADMVNHYPHPELRRHEAGEFFAAHHVVRADGGVTVLADRPIAAGQQVFEDYGDNPDEASEVIYITYHGFVPREKNAFDCIHLEL 1008
F WF R G AP++S+A F G G+ AT V G++ + P +V+ + L VYA + G + +++ LM++RAL AS+W PY+ LP +VPQT F G L L+D + A RR + Y L+A + A++ + +++ + WALS+V+SRALT RG K LVP ADM N+ PH RR +G F +H + + TV+ADR A G+Q+FEDYGDN + +Y+ +HGFV R+ N FDC+ L L
Sbjct: 93 FEAWFRGRGGQAPSISLARFEGMGTGVAATAPVKDGDLALEVPLDIVLCRDTLTALGG-------VYAGVGAAIGADEDLLSVALMRERALGAASQWAPYIDVLPKSVPQTAFFDDGALDALQDASVEQAARQRRRELRDHYDDLVAGGALATVFADLPEPKP-ALDDYLWALSLVQSRALTLRGVKYLVPFADMFNYAPHAADRRAASGANFLKYHKLNKES-FTVIADRAAAPGEQLFEDYGDNDNR----LYLEHHGFVARD-NPFDCVELAL 354
BLAST of mRNA_P-wetherbeei_contig179.3.2 vs. uniprot
Match: A0A7S3ZYH4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYH4_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.490e-32 Identity = 97/291 (33.33%), Postives = 148/291 (50.86%), Query Frame = 1
Query: 172 AEAETDFLRWFSVREGLAPAVSVAAFPSFGRGLLATQDVAAGEVLVSAPAGLVISQPHLATSANLPQEEKDVYATLRGDGGGEAIALFLMKQRALAEASEWRPYLACLPTAVPQTCIFAAGDLALLEDPRMASTAAARRNDTARRYSLLAPVLRRLL--GAEVAAGED--------GSIERFRWALSVVESRALTFRGEKMLVPLADMVNHYPH--PELRRHEAGEFFAAHHVVRADGGVTVLADRPIAAGQQVFEDYGDNPDEASEVIYITYHGFVPREKNAFDCIHLEL 1008
A + + W ++ G+A + +A F G GL + + G + P+ ++ S + T A + ++ +AIA L+ ++A S W Y++ LP AV +F L+ L +P++A AA + A ++P LRR + G +A+ D S+ + WALS+V SRAL F+G + LVP+AD+VNH H +R E G FF HHV+ + G+ +DR A G Q FEDYGDNP IY+ +HGFVP E+N FDC ++L
Sbjct: 28 APTNANLIDWLRLKGGIANGLEMAEFEGMGYGLRCSSRLETGAQALFVPSSVIFSGGNGNTIAR-------AHGQIQPLSDADAIAFNLLLEQAKGPKSVWALYMSMLPPAVLTPKLFGQPALSALHEPQVARRAARAHDLAAATLVRVSPSLRRAVRAGCALASASDMNICIEAHTSMASWAWALSIVNSRALIFKGVRFLVPIADLVNHRTHIGAWMREVEHGNFFLKHHVL-STSGLHTSSDRNFAPGYQFFEDYGDNPTH----IYVEHHGFVPEEENPFDCAPVKL 306
BLAST of mRNA_P-wetherbeei_contig179.3.2 vs. uniprot
Match: A0A813CZ06_9DINO (SETD3 protein n=5 Tax=Sar TaxID=2698737 RepID=A0A813CZ06_9DINO) HSP 1 Score: 140 bits (352), Expect = 3.990e-32 Identity = 111/312 (35.58%), Postives = 145/312 (46.47%), Query Frame = 1
Query: 190 FLRWFSVREGLAPAVSVAAFPS-FGRGLLATQDVAAGEVLVSAPAGLVISQPHLATSANLPQEEKDVYATLRGDGGGEAIALFLMKQRALAEASEWRPYLACLPTAVPQTCIFAAGDL--------ALLEDPR-----------------MASTAAARRNDTARRY-------------SLLAPVLRRLLGAEVAAGEDGSIERFRWALSVVESRALTFRGEKMLVPLADMVNHYPHPELRRHEAGEFFAAHHVVRADGGVTVLADRPIAAGQQVFEDYGDNPDEASEVIYITYHGFVPREKNAFDCIHLEL 1008
FLRWF V+VAAFP G G+ AT +V AG ++ P V+S+ + + K + A + I +FL+ QR L EAS W PY+A LP VP T ++ +L +L E R +AS A R ++ + + R L G ++ A G WA S+VESRALT RG K LVP ADM NH HPE R G+ FA HHVV AD V V ADRP A G V EDYGD+ + +Y+ +HG V + N FDC + L
Sbjct: 125 FLRWFDSVGAQRANVTVAAFPEPLGLGIKATGNVQAGSEILRVPLAAVMSRDTIVRHPSASGARKAIAAEQDDES---VIVVFLLLQRMLGEASPWAPYMAVLPEHVPSTLSWSDAELNATAAAFPSLAEQARDRQEAARELASSWVRDTLASCVEALREGRGQQXXXXXXXGPMDGDAAAMEAAARELTGLQLEAAASGP--SVMWAQSIVESRALTIRGRKFLVPFADMANHEQHPEPRAQSDGDHFAKHHVVTADAFV-VKADRPAAPGAAVSEDYGDSGNG----LYVAHHGMVIAD-NPFDCAVISL 425
BLAST of mRNA_P-wetherbeei_contig179.3.2 vs. uniprot
Match: A0A7S3JV89_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JV89_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.960e-31 Identity = 96/287 (33.45%), Postives = 147/287 (51.22%), Query Frame = 1
Query: 187 DFLRWFSVREGLAPAVSVAAFPSF--GRGLLATQDVAAGEVLVSAPAGLVISQPHLATSANLPQEEKDVYATLRGDGGGEAIALFLMKQRALAEASEWRPYLACLPTAVPQTC-IFAAGDLALLEDPRMASTAAARRNDTARRYSLLAPVLRRL--LGAEVAAGED-------GSIERFRWALSVVESRALTFRGEKMLVPLADMVNHYPHPELRRHEAGEFFAAHHVVRADGGVTVLADRP-IAAGQQVFEDYGDNPDEASEVIYITYHGFVPREKNAFDCIHLEL 1008
+ ++W G A + + F GRGL T+ ++A E+++ P ++++ T+ L EK+ + LR + +AIA L+ +RA AS W PYL L P T DL L+D + A + + + L+P LRR+ +G A F WA +++SRALTFRG+++L P ADMVN+ P P R+++AG FF +H + G + ADR + G Q EDYGDN S +IY+ YHGFVP+ N F+C+++ L
Sbjct: 20 ELVKWLESLGGKAQGLKIGQFDESEGGRGLECTRKISAEELVMLIPRQVLMTAE---TAHKLYPSEKEAF--LRDE---DAIATMLIGERAAGLASRWAPYLRVLANVFPTTLKSMNDNDLEWLQDSDLIYRAQQAKQNLRSDFERLSPTLRRVARVGCSTANRSKTCPLFDLAGFNAFSWARGIIDSRALTFRGKRVLAPFADMVNYAPLPRARQYDAGSFFLKYHYLDDQGNLHTRADRDCLYPGLQFLEDYGDN----SNLIYLEYHGFVPQIPNPFNCVNINL 294
BLAST of mRNA_P-wetherbeei_contig179.3.2 vs. uniprot
Match: A0A329SUB8_9STRA (SET domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SUB8_9STRA) HSP 1 Score: 136 bits (343), Expect = 5.470e-31 Identity = 96/288 (33.33%), Postives = 148/288 (51.39%), Query Frame = 1
Query: 166 SDAEAETDFLRWFSVREG-LAPAVSVAAFPSFGRGLLATQDVAAGEVLVSAPAGLVISQPHLATSANLPQEEKDVYATLRGDGGGEAIALFLMKQRALAEASEWRPYLACLPTA-----VPQTCIFAAG-DLALLEDPRMASTAAARRNDTARRYSLLAPVLRRLLGAEVAAGEDGSIERFRWALSVVESRALTFRGEKMLVPLADMVNHYPHPELRRHEAGEFFAAHHVVRADGGVTVLADRPIAAGQQVFEDYGDNPDEASEVIYITYHGFVPREKNAFDCIHLEL 1008
S+ E + FL WF G ++ +++ FP GRG++A Q V + L+ P ++I +AT + + K L+ D E + FLM ++A +S W PYL LP+ V IFA+ D+ L+D RM STA + R + Y + R L E + R+ WA +V+SRA + G+++LVP D+ N P E R+H+ G+ F H ++ G +T+ ADR ++G+Q+FEDYGDN S +Y +HGF+ +K FDC L
Sbjct: 70 SEDEKVSVFLGWFRAAGGNVSNKIAIETFPGMGRGVVALQAVKENDELLFVPKSVIICYDTIATEWSSHLKLKKKLVKLKSDQE-ELMTAFLMLEQAKGLSSRWAPYLQLLPSISSRNYVASPLIFASDKDIDDLQDERMISTAKSERQRVKKAYGRFKRLFRSFLDDETM-----DLSRYVWARFLVDSRAFSIHGQRVLVPFGDVFNGKPDDETRQHDNGQRFLLFHDLQPQG-MTIRADRDTSSGEQLFEDYGDN----SNYVYFLHHGFLMSDKG-FDCAAFRL 345
BLAST of mRNA_P-wetherbeei_contig179.3.2 vs. uniprot
Match: A0A833TC56_PHYIN (Rubisco LSMT substrate-binding n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TC56_PHYIN) HSP 1 Score: 136 bits (342), Expect = 7.300e-31 Identity = 91/282 (32.27%), Postives = 138/282 (48.94%), Query Frame = 1
Query: 166 SDAEAETDFLRWFSVREG-LAPAVSVAAFPSFGRGLLATQDVAAGEVLVSAPAGLVISQPHLATSANLPQEEKDVYATLRGDGGGEAIALFLMKQRALAEASEWRPYLACLPT-----AVPQTCIFAAGDLALLEDPRMASTAAARRNDTARRYSLLAPVLRRLLGAEVAAGEDGSIERFRWALSVVESRALTFRGEKMLVPLADMVNHYPHPELRRHEAGEFFAAHHVVRADGGVTVLADRPIAAGQQVFEDYGDNPDEASEVIYITYHGFVPREKNAFDC 993
S+ E F+ WF G ++ +++ FP GRG++A Q V + L+ P G++I +AT + K + L+ D E + FLM ++A AS W PY LP+ VP D+ L+D RM TA R + Y + R L + S+ R+ W +V SRA + RG+++LVP D+ N P E R+ + G+ F H ++ G +T+ ADR +GQ +FEDYGDN S +Y +HGF+ +K FDC
Sbjct: 71 SEQEKVAAFVNWFRAEGGNVSDKIAINKFPEMGRGIVALQSVKENDNLLFVPKGIIICYDTIATEWSSHASLKKTLSKLKSDQE-ELLTAFLMLEQAKGHASRWAPYFQVLPSFISKNTVPSPLFSNEEDVDALQDERMIQTARTERQRAKKAYGRFKRLFRSFLDDKTM-----SLSRYLWTRFLVNSRAFSIRGQRVLVPFGDIFNGEPDDEARQQDNGQRFLLFHDLQPQG-MTIRADRDTLSGQHLFEDYGDN----SNYVYFLHHGFLMSDKG-FDC 340
BLAST of mRNA_P-wetherbeei_contig179.3.2 vs. uniprot
Match: F0YN91_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN91_AURAN) HSP 1 Score: 131 bits (329), Expect = 3.380e-29 Identity = 99/292 (33.90%), Postives = 137/292 (46.92%), Query Frame = 1
Query: 184 TDFLRWFSVREGLAPAVSVAAFPSFGRGLLATQDVAAGEVLVSAPAGLVISQPHLATSANLPQEEKDVYATLRGDGGGEAIALFLMKQRALAEASEWRPYLACLP-TAVPQTCIFAAGDLALLEDPRMASTAAARRNDTARRYSLLAP--------VLRRLLGAEVAAGEDGSIER------FRWALSVVESRALTFRGEKMLVPLADMVNHYPHPEL--RRHEAGEFFAAHHVVRADGGVTVLADRPIAAGQQVFEDYGDNPDEASEVIYITYHGFVPREKNAFDCIHLEL 1008
++ + W G A + +A F GRGL + V A V++ P L S S N L EAIA L+ +RA + S W PYL LP +AV F+ L+D T T + AP +R+ GA + IE + WALS+++SRALTF+G + L+P+AD+VN+ PHP RR +G+FF HH + + L+DR G Q FEDYGDNP IY+ +HGFVP+E N FDC+ + L
Sbjct: 22 SEVIDWLRSMGGTAQGLQLADFADMGRGLRCGERVLAESVVLDVPQELFFS----GDSGNALASSFGADILL---SDSEAIAFQLLVERAKGQQSTWAPYLDILPRSAVLTPKAFSKSGFEALQDSLFVETNLQSHGLT----GVSAPGVRGSLNLAVRKACGASEVSNLGACIEAHTSSKAWAWALSIIDSRALTFKGARHLIPVADLVNYKPHPHASTRRFASGDFFLQHHKLTPTS-IKTLSDRTCELGAQFFEDYGDNPT----TIYVEHHGFVPKEVNPFDCVPVSL 297
BLAST of mRNA_P-wetherbeei_contig179.3.2 vs. uniprot
Match: A0A5D6Y1Q2_9STRA (Rubis-subs-bind domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Q2_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.610e-28 Identity = 105/289 (36.33%), Postives = 145/289 (50.17%), Query Frame = 1
Query: 163 ASDAEAETDFLRWFSVREGLAPA-VSVAAFPSFGRGLLATQDVAAGEVLVSAPAGLVISQPHLATSANLPQEEKDVYATLRGDGGGEAIALF-LMKQRALAEASEWRPYLACLP--TAVPQTC--IFAAGD-LALLEDPRMASTAAARRNDTARRYSLLAPVLRRLLGAEVAAGEDGSIERFRWALSVVESRALTFRGEKMLVPLADMVNHYPHPELRRHEAGEFFAAHHVVRADGGVTVLADRPIAAGQQVFEDYGDNPDEASEVIYITYHGFVPREKNAFDCIHLEL 1008
A DA+ E FL WF G+ + +A F S GRG +A Q+++ + L+ P ++I + +A A P K + L D E + F L++ + E S W PYL LP T+V T +++ D + L+D RM + A R R + RRL A +AA R+ WA +V SRA T G++ LVP D+ N H RR + G F +H D G+ VLADR +AAG QVFEDYGDN S +Y +HGFV + N FDC L L
Sbjct: 84 ARDADVER-FLEWFDGVGGVRHKHIGIATFASMGRGAVAMQEISEHDQLLFVPMNVIICRETIARVA--PPALKHKFQQLM-DAQDELLTAFVLLESLKMNEPSLWGPYLQLLPAYTSVSATSPLFYSSQDEIDALQDERMIAAAQQERRVAKRAFQRF----RRLFRASIAAVPSDLEPRYLWARFLVSSRAFTIHGQRYLVPFGDVFNGQRHASARRFDNGLKFLQYHRF-TDHGMVVLADRAVAAGVQVFEDYGDN----SNYVYFLHHGFVLTD-NPFDCASLRL 358
BLAST of mRNA_P-wetherbeei_contig179.3.2 vs. uniprot
Match: A0A6A3XW44_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XW44_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.250e-27 Identity = 89/284 (31.34%), Postives = 145/284 (51.06%), Query Frame = 1
Query: 190 FLRWFSVREG-LAPAVSVAAFPSFGRGLLATQDVAAGEVLVSAPAGLVISQPHLATSANLPQEEKDVYATLRGDGGGEAIALFLMKQRALAEASEWRPYLACLP-----TAVPQTCIFAAGD-LALLEDPRMASTAAARRNDTARRYSLLAPVLRRLLGAEVAAGEDGSIE--RFRWALSVVESRALTFRGEKMLVPLADMVNHYPHPELRRHEAGEFFAAHHVVRADGGVTVLADRPIAAGQQVFEDYGDNPDEASEVIYITYHGFVPREKNAFDCIHLELNL 1014
F+ WF G ++ +++ FP GRG++A Q V + L+ P ++I + + + + K L+ D E + FL+ ++A S+W PYL LP T V +F++ D + L+D R+ A A R + + + R +LG D S+E R+ WA +V SRA + +G+++LVP D+ N P ++R+H+ G+ F H ++ G +TV ADR G+Q+FEDYGDN S +Y +HGF+ ++ FDC L L
Sbjct: 77 FMDWFRAAGGNVSSKIAIQTFPGMGRGVVALQSVEENDELLFVPKSIIICYDTITQNWSSQPKLKRKLERLQQDQE-ELLTAFLLLEQAKGHESQWAPYLNLLPSFSSRTDVASPLLFSSDDAVEALQDERIIEAAKAERQRAKKAHGRFKRLFRHMLG-------DNSLELSRYLWARFLVNSRAFSIQGQRVLVPFGDIFNGEPDDQVRKHDNGQRFLQFHDLQPMG-MTVRADRGTPGGKQLFEDYGDN----SNYVYFLHHGFLMGDRG-FDCAAFHLPL 346 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig179.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig179.3.2 >prot_P-wetherbeei_contig179.3.2 ID=prot_P-wetherbeei_contig179.3.2|Name=mRNA_P-wetherbeei_contig179.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=417bp MSLLLNFESTVDALWCSATVVPMRLLLLALISTSLALKTASDAEAETDFLback to top mRNA from alignment at P-wetherbeei_contig179:2611..4523+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig179.3.2 ID=mRNA_P-wetherbeei_contig179.3.2|Name=mRNA_P-wetherbeei_contig179.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1913bp|location=Sequence derived from alignment at P-wetherbeei_contig179:2611..4523+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig179:2611..4523+ >mRNA_P-wetherbeei_contig179.3.2 ID=mRNA_P-wetherbeei_contig179.3.2|Name=mRNA_P-wetherbeei_contig179.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1251bp|location=Sequence derived from alignment at P-wetherbeei_contig179:2611..4523+ (Phaeothamnion wetherbeei SAG_119_79)back to top |