prot_P-wetherbeei_contig10589.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig10589.1.2
Unique Name	prot_P-wetherbeei_contig10589.1.2
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	207

Homology

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BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: D7G0A4_ECTSI (Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxID=2870 RepID=D7G0A4_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 3.270e-123
Identity = 179/206 (86.89%), Postives = 191/206 (92.72%), Query Frame = 0

Query:    1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNKKKAACC 206
            M+RNESPFDMQIKLLMIGDS GVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF +IRNWV QI+QHADV VN+ILIGNKCDM+++REVS E+GAQLAAEYGIQFFETSAKNDINVEKGFITIAREVK+RLM DGP  G++  GNVNL AQ +KKK  CC
Sbjct:    1 MSRNESPFDMQIKLLMIGDS-GVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRAAGNVNLNAQASKKKTGCC 205

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BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A836CCB2_9STRA (Rab8A, rab family GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCB2_9STRA)

HSP 1 Score: 346 bits (888), Expect = 1.540e-119
Identity = 176/207 (85.02%), Postives = 193/207 (93.24%), Query Frame = 0

Query:    1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNK-KKAACC 206
            MAR+ESPFDMQIKLLMIGDS GVGKTCLLLRYA+D FSQTFITTIGIDFKIKNI+LD KR+KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQ+IRNWV QI+QHADVHVN+ILIGNKCD+++EREVSTE+GAQLAAEYGIQFFETSAKNDINVEKGFIT+AREVKNRLM DG +QG + QGNV L+A     KK++CC
Sbjct:    1 MARHESPFDMQIKLLMIGDS-GVGKTCLLLRYASDHFSQTFITTIGIDFKIKNIELDTKRVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQSIRNWVAQIQQHADVHVNKILIGNKCDIDNEREVSTEEGAQLAAEYGIQFFETSAKNDINVEKGFITVAREVKNRLMADGGSQGARTQGNVALSAPAKGGKKSSCC 206

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BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: K3WPX9_GLOUD (Uncharacterized protein n=28 Tax=Oomycota TaxID=4762 RepID=K3WPX9_GLOUD)

HSP 1 Score: 322 bits (825), Expect = 5.300e-110
Identity = 162/206 (78.64%), Postives = 182/206 (88.35%), Query Frame = 0

Query:    1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNKKKAACC 206
            MAR+E+PFDMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFKIKNI+LD K++KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFQ+IRNWVGQI+QHADVHVN+ILIGNKCDM D++ VSTE+G  LA EYG++FFETSAKN+INVE GFI IAREVKNRLM +G   G  ++ NVNL+A+    K  CC
Sbjct:    1 MARHENPFDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVESGFIEIAREVKNRLMEEG---GPHKKENVNLSAKPAAPKKGCC 202

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BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A4D9D279_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D279_9STRA)

HSP 1 Score: 313 bits (802), Expect = 1.750e-106
Identity = 158/206 (76.70%), Postives = 178/206 (86.41%), Query Frame = 0

Query:    1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNKKKAACC 206
            MAR E+PFDMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LDG+RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF++IRNWVGQI+QHADVHVN+ILIGNKCDM  +R VSTE+G  LA ++GIQFFETSAKNDINVEK F+TIAREVKNR++ DG  +    +  V+       KK  CC
Sbjct:    1 MARQENPFDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKRSNEAKK--CC 203

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BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A024TZG5_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TZG5_9STRA)

HSP 1 Score: 308 bits (790), Expect = 1.550e-104
Identity = 161/215 (74.88%), Postives = 180/215 (83.72%), Query Frame = 0

Query:    1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGN--VNL-------TAQTNKKKAACC 206
            MARNE+PFDMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFK+KNIDLDGK+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF +IRNWVGQI+QHADVHVN+IL+GNKCDM D++ VSTE+G  LA EYG++FFETSAKN+INVE GFI IA EVK RLM +G   G  ++ +  VNL       T  +N  K  CC
Sbjct:    1 MARNENPFDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIANEVKTRLMEEG---GPHKKSDLVVNLGKKGNDPTKASNGGKGGCC 211

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BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: W7TKL6_9STRA (Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKL6_9STRA)

HSP 1 Score: 311 bits (798), Expect = 1.650e-104
Identity = 153/181 (84.53%), Postives = 170/181 (93.92%), Query Frame = 0

Query:    1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDG 181
            MAR E+PFDMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LDG+RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF++IRNWVGQI+QHADVHVN+ILIGNKCDM  +R VSTE+G  LA ++GIQFFETSAKNDINVEK F+TIAREVKNR++ DG
Sbjct:    1 MARQENPFDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDG 180

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BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A6T5Q365_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q365_HETAK)

HSP 1 Score: 306 bits (785), Expect = 7.520e-104
Identity = 156/206 (75.73%), Postives = 176/206 (85.44%), Query Frame = 0

Query:    1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNKKKAACC 206
            MAR+E+ +DMQIKLLMIGDS GVGKTCLLLRYAN +FSQTFITTIGIDFKIKNI LDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF +IRNWV QI+QHADVHVN+ILIGNKCDM DER V+TE+G +LAAEYGIQFFETSAKNDI VE+ F+T+AREVK RL++D       R+ +  +  QT K  +  C
Sbjct:    1 MARHENAYDMQIKLLMIGDS-GVGKTCLLLRYANAAFSQTFITTIGIDFKIKNITLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRNSFNSIRNWVSQIQQHADVHVNKILIGNKCDMKDERVVTTEEGQKLAAEYGIQFFETSAKNDIQVEESFVTVAREVKERLINDV-----DRKTDARVNLQTQKSSSKSC 200

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BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A3R7WE67_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WE67_9STRA)

HSP 1 Score: 306 bits (783), Expect = 2.730e-103
Identity = 161/215 (74.88%), Postives = 180/215 (83.72%), Query Frame = 0

Query:    1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQ--IWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDG-PAQGNQ------RQGNVNLTAQTNKKKAACC 206
            MARNE+PFDMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFK+KNIDLDGK+IKLQ  IWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF +IRNWVGQI+QHADVHVN+IL+GNKCDM D++ VSTE+G  LA EYGI+FFETSAKN+INVE GFI IA EVK RLM +G P + N       ++G+ + T   N  K  CC
Sbjct:   10 MARNENPFDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQVDIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGIKFFETSAKNNINVEGGFIEIANEVKTRLMEEGGPHKKNDLVVNLGKKGSNDPTKAGNGGKGGCC 223

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BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A7S2RB79_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB79_9STRA)

HSP 1 Score: 304 bits (779), Expect = 5.560e-103
Identity = 158/200 (79.00%), Postives = 171/200 (85.50%), Query Frame = 0

Query:    8 FDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNKKKA-ACC 206
            FDMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFKIKNI+LD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF +IRNWV QI+QHADVHVN+ILIGNKCDM D+R VS ++G +LA EYGIQFFETSAKNDI V+ GF+ IAREVKNRL+ DGP     R G  N + Q NK K  ACC
Sbjct:    7 FDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRTSFTSIRNWVSQIQQHADVHVNKILIGNKCDMEDQRMVSFDEGKKLAQEYGIQFFETSAKNDIEVDSGFVAIAREVKNRLIADGPTA--VRSGIHNPSHQNNKSKGRACC 203

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BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A7S4M6F2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M6F2_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.240e-102
Identity = 151/207 (72.95%), Postives = 180/207 (86.96%), Query Frame = 0

Query:    1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQG-NVNLTAQTNKKKAACC 206
            M++  +P+DMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFKIKN+D+DGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF++IRNWV QI+QHADVHVN+IL+GNKCDM DE+ VSTE+GA+LA E+GI+F+E SAKNDINVE+ FI IAR+VK+RL+ DG       +G ++N   Q +++   CC
Sbjct:    1 MSQQSAPYDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDIDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVSQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGAKLAKEFGIEFWECSAKNDINVEQAFIGIARDVKDRLVADGGGGPAANKGLSLNKPGQGSQRNRGCC 206

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G0A4_ECTSI	3.270e-123	86.89	Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxI...	[more]
A0A836CCB2_9STRA	1.540e-119	85.02	Rab8A, rab family GTPase n=2 Tax=Tribonema minus T...	[more]
K3WPX9_GLOUD	5.300e-110	78.64	Uncharacterized protein n=28 Tax=Oomycota TaxID=47...	[more]
A0A4D9D279_9STRA	1.750e-106	76.70	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A024TZG5_9STRA	1.550e-104	74.88	Uncharacterized protein n=7 Tax=Saprolegniaceae Ta...	[more]
W7TKL6_9STRA	1.650e-104	84.53	Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=...	[more]
A0A6T5Q365_HETAK	7.520e-104	75.73	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A3R7WE67_9STRA	2.730e-103	74.88	Uncharacterized protein n=4 Tax=Aphanomyces astaci...	[more]
A0A7S2RB79_9STRA	5.560e-103	79.00	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S4M6F2_9STRA	1.240e-102	72.95	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 13..34 score: 34.68 coord: 116..129 score: 42.81 coord: 151..173 score: 43.27 coord: 36..52 score: 33.09 coord: 54..76 score: 56.68
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 12..176 e-value: 2.0E-93 score: 326.4
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 17..204 e-value: 3.8E-5 score: 23.9
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..176 e-value: 1.3E-36 score: 137.7
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..177 e-value: 0.0077 score: -2.9
None	No IPR available	PANTHER	PTHR47980	LD44762P	coord: 1..206
None	No IPR available	PANTHER	PTHR47980:SF18	SUBFAMILY NOT NAMED	coord: 1..206
None	No IPR available	PROSITE	PS51420	RHO	coord: 5..183 score: 10.268894
None	No IPR available	PROSITE	PS51419	RAB	coord: 7..206 score: 33.727806
None	No IPR available	CDD	cd01867	Rab8_Rab10_Rab13_like	coord: 9..176 e-value: 1.93231E-108 score: 306.117
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 14..176 e-value: 7.0E-12 score: 32.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 13..174 e-value: 1.9E-63 score: 212.9
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 4..206 score: 20.835451
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..206 e-value: 3.2E-70 score: 237.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..179
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..167 e-value: 2.0E-28 score: 97.2

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig10589	contig	P-wetherbeei_contig10589:64..2198 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig10589.1.2	mRNA_P-wetherbeei_contig10589.1.2	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig10589 64..2315 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig10589.1.2 ID=prot_P-wetherbeei_contig10589.1.2|Name=mRNA_P-wetherbeei_contig10589.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=207bp
MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFK
IKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF
QAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQ
FFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNK
KKAACC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom