prot_P-wetherbeei_contig1767.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1767.2.1
Unique Nameprot_P-wetherbeei_contig1767.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length602
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1767.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 571..591
NoneNo IPR availableGENE3D1.20.5.110coord: 531..592
e-value: 4.9E-8
score: 34.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..478
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..457
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableCDDcd15873R-SNARE_STXBP5_6coord: 533..593
e-value: 6.0847E-14
score: 64.5852
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 537..590
IPR042855v-SNARE, coiled-coil homology domainPFAMPF00957Synaptobrevincoord: 537..592
e-value: 3.7E-6
score: 26.6
IPR042855v-SNARE, coiled-coil homology domainPROSITEPS50892V_SNAREcoord: 535..595
score: 10.002439

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1767contigP-wetherbeei_contig1767:2192..3997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1767.2.1mRNA_P-wetherbeei_contig1767.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1767 2143..4278 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1767.2.1 ID=prot_P-wetherbeei_contig1767.2.1|Name=mRNA_P-wetherbeei_contig1767.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=602bp
MDRLRRATSGGGGGAAPPTPPSQPGRQGGFGGFGGFGGDSDSGGDVIFVL
LGGRLEIFDLMSGVPLAIVQTSDLTDGLSDPLFVRCVDASGLPIGSVLRE
DGHIRWAHLSPLASDGGGSNGNGGSRRGSTTSNSTPSSEDDHVEPHLLVV
LGSSLALVALEASGTGLAGMATAAASAVSAVTTTLAAPLKHGRSSSNDGV
VLSSQPLLHAGLRICAAARLPPADDGGALPAGAAGAGICWTAFWLEEEGD
DTADDDDENGSKIGGKGGGGKGGGGGDDGGVEKRATLMVLDGASNLTAFL
LPSLTIVHSRHLPDAAAAAAAAVATTAAGAGSADTAVMTAAAAAPPLLPL
AVNALGELTLRTGPRELARFSILGQACYERLLDGRQRLVKVAEAVAANRR
SHRARVEPEAGQLLTSAAAAAATAAATAATAARSPGTPSGRSKWSSMLRN
KWRGSGSSKSIDGGGGDGGGGGGASSYDSGGGRGRAAAARIFDACGDLSE
TRRREELFAGRRPWVQTSPDGAVGSTGTCSGNRGGLARAHGGVDDTKAAV
SEAQKLALENVEKLGKLENRTAQLEDNAANFVDMARELRRRQEAQPECIV
S*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042855V_SNARE_CC