mRNA_P-wetherbeei_contig1747.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1747.4.1 vs. uniprot
Match: A0A836CLQ8_9STRA (AN1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLQ8_9STRA) HSP 1 Score: 117 bits (293), Expect = 4.860e-30 Identity = 50/71 (70.42%), Postives = 56/71 (78.87%), Query Frame = 1
Query: 394 AEPAQRNRKRCFTCNKKIGLTGIECRCKLVFCGVHRYPEQHGCAFDFKTADRATLANTVKGGGQFSKVERL 606
A P Q++R RCF CNKK+GLTGIECRCKLVFCG+HRYPE H C FDFK +DR L V GGG FSKV+RL
Sbjct: 82 APPVQKSRTRCFKCNKKVGLTGIECRCKLVFCGLHRYPESHDCGFDFKASDRLALEKVVLGGGAFSKVDRL 152
BLAST of mRNA_P-wetherbeei_contig1747.4.1 vs. uniprot
Match: D8LNW2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW2_ECTSI) HSP 1 Score: 119 bits (297), Expect = 2.530e-29 Identity = 53/74 (71.62%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 388 EPA-EPAQRNRKRCFTCNKKIGLTGIECRCKLVFCGVHRYPEQHGCAFDFKTADRATLANTVKGGGQFSKVERL 606
EPA P Q+NRKRCFTC+KK+G TGI CRC VFC +HRYP+QH C FDFKT+DR L TV GGGQFSKVERL
Sbjct: 197 EPAARPVQKNRKRCFTCHKKVGYTGIACRCDYVFCSLHRYPDQHDCTFDFKTSDRNDLKRTVVGGGQFSKVERL 270
BLAST of mRNA_P-wetherbeei_contig1747.4.1 vs. uniprot
Match: A0A2D4C9V6_PYTIN (Zinc-finger containing protein, partial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9V6_PYTIN) HSP 1 Score: 107 bits (267), Expect = 2.330e-26 Identity = 45/69 (65.22%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 400 PAQRNRKRCFTCNKKIGLTGIECRCKLVFCGVHRYPEQHGCAFDFKTADRATLANTVKGGGQFSKVERL 606
P Q+N+KRC+ C KK+GLT IECRC VFC HRYP+QH C+FDFK ADRA LA GGGQF K+E+L
Sbjct: 66 PVQKNKKRCWECKKKVGLTAIECRCGYVFCSGHRYPDQHNCSFDFKAADRAELARRNPGGGQFGKLEKL 134
BLAST of mRNA_P-wetherbeei_contig1747.4.1 vs. uniprot
Match: A0A421GSI5_9STRA (AN1-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GSI5_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.020e-26 Identity = 48/78 (61.54%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 376 TTEAEPAEP-AQRNRKRCFTCNKKIGLTGIECRCKLVFCGVHRYPEQHGCAFDFKTADRATLANTVKGGGQFSKVERL 606
T + +PAE Q+N+KRC+ C KK+GLT IECRC VFC HRY +QH C+FDFKTADRA LA GGGQF K+E+L
Sbjct: 54 TEDEKPAEKLVQKNKKRCWECKKKVGLTAIECRCGYVFCSNHRYADQHSCSFDFKTADRAELARRNPGGGQFGKLEKL 131
BLAST of mRNA_P-wetherbeei_contig1747.4.1 vs. uniprot
Match: H3G9H4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9H4_PHYRM) HSP 1 Score: 106 bits (265), Expect = 7.670e-26 Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 382 EAEPAE-PAQRNRKRCFTCNKKIGLTGIECRCKLVFCGVHRYPEQHGCAFDFKTADRATLANTVKGGGQFSKVERL 606
E +PAE P Q+N+KRC+ C KK+GLT IECRC VFC HRY +QH C+FDFK +DRA LA GGGQF K+E+L
Sbjct: 77 EPKPAEKPVQKNKKRCWECKKKVGLTAIECRCGYVFCSGHRYADQHNCSFDFKASDRAELARRNPGGGQFGKLEKL 152
BLAST of mRNA_P-wetherbeei_contig1747.4.1 vs. uniprot
Match: A0A662WPI4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WPI4_9STRA) HSP 1 Score: 106 bits (265), Expect = 9.800e-26 Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 385 AEPAEPAQRNRKRCFTCNKKIGLTGIECRCKLVFCGVHRYPEQHGCAFDFKTADRATLANTVKGGGQFSKVERL 606
A P + Q+N+KRC+ C KK+GLT IECRC VFC HRY +QH C+FDFKTADRA LA GGGQF K+E+L
Sbjct: 88 AAPEKLVQKNKKRCWECKKKVGLTAIECRCGFVFCSNHRYADQHSCSFDFKTADRAELARLNPGGGQFGKLEKL 161
BLAST of mRNA_P-wetherbeei_contig1747.4.1 vs. uniprot
Match: A0A024TCY0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCY0_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.380e-25 Identity = 46/75 (61.33%), Postives = 54/75 (72.00%), Query Frame = 1
Query: 382 EAEPAEPAQRNRKRCFTCNKKIGLTGIECRCKLVFCGVHRYPEQHGCAFDFKTADRATLANTVKGGGQFSKVERL 606
EA P +P Q N+ RC+ C KKIGLTGIECRC V+CG+HRY +QH C FD K AD A LA GGG F+KVE+L
Sbjct: 87 EAPPEKPVQTNKSRCWECKKKIGLTGIECRCGFVYCGIHRYADQHECTFDHKAADIAELAKRNPGGGHFNKVEKL 161
BLAST of mRNA_P-wetherbeei_contig1747.4.1 vs. uniprot
Match: A0A836CMZ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMZ9_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.740e-25 Identity = 47/65 (72.31%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 412 NRKRCFTCNKKIGLTGIECRCKLVFCGVHRYPEQHGCAFDFKTADRATLANTVKGGGQFSKVERL 606
NRKRCFTCNKK GLTGIEC+CKLVFC +HR+PE H CAFDFK R L V GGG FSKV+RL
Sbjct: 175 NRKRCFTCNKKTGLTGIECKCKLVFCSLHRHPEAHNCAFDFKEDGRRALERVVLGGGAFSKVDRL 239
BLAST of mRNA_P-wetherbeei_contig1747.4.1 vs. uniprot
Match: A0A8K1FHH9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHH9_PYTOL) HSP 1 Score: 105 bits (263), Expect = 2.000e-25 Identity = 48/77 (62.34%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 385 AEPAEP---AQRNRKRCFTCNKKIGLTGIECRCKLVFCGVHRYPEQHGCAFDFKTADRATLANTVKGGGQFSKVERL 606
A PAE Q+N+KRC+ C KK+GLT IECRC VFC HRYP+QH C FDFK ADRA LA GGGQF K+E+L
Sbjct: 86 AAPAEEDKLVQKNKKRCWECKKKVGLTAIECRCGYVFCNGHRYPDQHNCGFDFKAADRAELARRNPGGGQFGKLEKL 162
BLAST of mRNA_P-wetherbeei_contig1747.4.1 vs. uniprot
Match: A0A836CDM0_9STRA (AN1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDM0_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.340e-25 Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 1
Query: 406 QRNRKRCFTCNKKIGLTGIECRCKLVFCGVHRYPEQHGCAFDFKTADRATLANTVKGGGQFSKVERL 606
Q+NR RC+ C+KK+GLTG+EC+C VFC HRYPE+H C++DF+ +DRA LA TV GGGQF KV ++
Sbjct: 52 QKNRSRCYNCSKKVGLTGLECKCGYVFCSKHRYPEEHSCSYDFRASDRAQLAKTVVGGGQFIKVAQI 118 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1747.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1747.4.1 >prot_P-wetherbeei_contig1747.4.1 ID=prot_P-wetherbeei_contig1747.4.1|Name=mRNA_P-wetherbeei_contig1747.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=194bp MCSKCWRDTVNRQQQQLVDNARAKEAAVAAPPVPPSPTAAPASVATPPLPback to top mRNA from alignment at P-wetherbeei_contig1747:5871..6479- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1747.4.1 ID=mRNA_P-wetherbeei_contig1747.4.1|Name=mRNA_P-wetherbeei_contig1747.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=609bp|location=Sequence derived from alignment at P-wetherbeei_contig1747:5871..6479- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1747:5871..6479- >mRNA_P-wetherbeei_contig1747.4.1 ID=mRNA_P-wetherbeei_contig1747.4.1|Name=mRNA_P-wetherbeei_contig1747.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=582bp|location=Sequence derived from alignment at P-wetherbeei_contig1747:5871..6479- (Phaeothamnion wetherbeei SAG_119_79)back to top |