prot_P-wetherbeei_contig17408.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17408.1.1
Unique Nameprot_P-wetherbeei_contig17408.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length84
Homology
BLAST of mRNA_P-wetherbeei_contig17408.1.1 vs. uniprot
Match: A0A835ZCM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCM5_9STRA)

HSP 1 Score: 115 bits (288), Expect = 4.100e-28
Identity = 59/84 (70.24%), Postives = 68/84 (80.95%), Query Frame = 0
Query:    1 VFVRNLPVEFLEPDIENLFGEFGPIKRVDLIKTMDDEGIKTSRGFGFVRFALEEDAGKAAAALHGKFVNGRKLCCEIALKKGAK 84
            VFVRNLP  FLEPDIE LFGE GPIKR+DLIK+M D G K S+GFGFVRFAL+ DA  AAAAL+G+ V G+ +  EIA+KKGAK
Sbjct:   31 VFVRNLPETFLEPDIETLFGEHGPIKRIDLIKSMHD-GAKLSKGFGFVRFALQADAAAAAAALNGRQVQGKAISVEIAMKKGAK 113          
BLAST of mRNA_P-wetherbeei_contig17408.1.1 vs. uniprot
Match: D7G584_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G584_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 2.340e-21
Identity = 50/75 (66.67%), Postives = 57/75 (76.00%), Query Frame = 0
Query:   11 LEPDIENLFGEFGPIKRVDLIKTMDDE-GIKTSRGFGFVRFALEEDAGKAAAALHGKFVNGRKLCCEIALKKGAK 84
            LEPDIE +  + GPIKR+DLIKT D E G K SRGFGFV FALE DA KA + +H K V GR++ CEIALKKGAK
Sbjct:    2 LEPDIETMLADCGPIKRIDLIKTTDAETGAKRSRGFGFVTFALESDATKAVSIIHRKRVMGREVSCEIALKKGAK 76          
BLAST of mRNA_P-wetherbeei_contig17408.1.1 vs. uniprot
Match: A0A4D9CR96_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CR96_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.500e-15
Identity = 42/84 (50.00%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 VFVRNLPVEFLEPDIENLFGEFGPIKRVDLIKTMDDEGIKTSRGFGFVRFALEEDAGKAAAALHGKFVNGRKLCCEIALKKGAK 84
            +FVRNLP      D+E L G  GP+KR  +I++ D      SRGFGFV+FA+ EDA +A A L G  +NGR L  E+ALK+G K
Sbjct:    9 IFVRNLPFSASTTDLEVLCGSIGPVKRASIIQSGDG----VSRGFGFVKFAMPEDAMRAVAILSGAELNGRTLSIELALKRGQK 88          
BLAST of mRNA_P-wetherbeei_contig17408.1.1 vs. uniprot
Match: W7T7L7_9STRA (Rna-binding protein 28 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7L7_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.840e-15
Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    1 VFVRNLPVEFLEPDIENLFGEFGPIKRVDLIKTMDDEGIKTSRGFGFVRFALEEDAGKAAAALHGKFVNGRKLCCEIALKKGAK 84
            +FVRNLP      D+E L G+ GP+KR  +I++ D      SRGFGFV++A+ EDA +A A L G  +NGR L  E+ALK+G K
Sbjct:    9 IFVRNLPFSASTTDLEVLCGKIGPVKRASIIQSGDG----VSRGFGFVKYAMPEDAMRAVAILSGAELNGRTLSIELALKRGQK 88          
BLAST of mRNA_P-wetherbeei_contig17408.1.1 vs. uniprot
Match: A0A7S1U6V6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6V6_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 7.250e-15
Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    1 VFVRNLPVEFLEPDIENLFGEFGPIKRVDLIKTMDDEGIKTSRGFGFVRFALEEDAGKAAAALHGKFVNGRKLCCEIALKK 81
            VFVR LP ++ E  +  LF + GP+KRVDLI+   D   + S+GFGFVRFA+  DA +AA  L G+   GR +  EIA KK
Sbjct:   10 VFVRQLPFDWTEEQVMQLFSDSGPVKRVDLIR---DAKTRQSKGFGFVRFAMAPDARRAAQDLDGQRKGGRTIRVEIASKK 87          
BLAST of mRNA_P-wetherbeei_contig17408.1.1 vs. uniprot
Match: A0A8K1CP94_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP94_PYTOL)

HSP 1 Score: 75.5 bits (184), Expect = 4.700e-14
Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    1 VFVRNLPVEFLEPDIENLFGEFGPIKRVDLIKTMDDEGIK----TSRGFGFVRFALEEDAGKAAAALHGKFVNGRKLCCEIALKK 81
            VFVRNLP +  +  +E +FGE GP+K+VD+IK   D+G K    T+RGF FVRFA+  DA  A   LH     GRK+  EIA +K
Sbjct:    5 VFVRNLPFDVTQDALEQVFGEIGPVKKVDVIK---DKGKKKSETTTRGFAFVRFAMAADAQYAIEKLHQSDFRGRKMILEIAKEK 86          
BLAST of mRNA_P-wetherbeei_contig17408.1.1 vs. uniprot
Match: A0A7S4F0N5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F0N5_CHRCT)

HSP 1 Score: 73.9 bits (180), Expect = 1.160e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    1 VFVRNLPVEFLEPDIENLFGEFGPIKRVDLIKTMDDEGIKTSRGFGFVRFALEEDAGKAAAALHGKFVNGRKLCCEI 77
            VFVRNLP +  +P++E+ F   GP+ R  +++   D+  +  RGFGFV F L +DA +AAA LHGK + GRK+  ++
Sbjct:   28 VFVRNLPYDLSDPELEDHFAAIGPVTRAFVVR---DKRTREGRGFGFVSFVLPDDACRAAAELHGKLLKGRKITVDL 101          
BLAST of mRNA_P-wetherbeei_contig17408.1.1 vs. uniprot
Match: K3WMW4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMW4_GLOUD)

HSP 1 Score: 73.9 bits (180), Expect = 1.630e-13
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    1 VFVRNLPVEFLEPDIENLFGEFGPIKRVDLIKTMDDEGIKTS----RGFGFVRFALEEDAGKAAAALHGKFVNGRKLCCEIALKKG 82
            VFVRNLP    + ++E +F + GP+K+VD+IK   D+G K S    RGF FV+FA+E DA  A   L+G  + GR++  EIA +KG
Sbjct:    5 VFVRNLPYGITQEELEQVFSDIGPVKKVDVIK---DKGKKKSDMLTRGFAFVKFAIENDAVYAVEKLNGHELQGRRMRLEIAREKG 87          
BLAST of mRNA_P-wetherbeei_contig17408.1.1 vs. uniprot
Match: A0A1V9ZKF3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKF3_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.640e-13
Identity = 40/88 (45.45%), Postives = 55/88 (62.50%), Query Frame = 0
Query:    1 VFVRNLPVEFLEPDIENLFGEFGPIKRVDLIKTMDDEGIKTS----RGFGFVRFALEEDAGKAAAALHGKFVNGRKLCCEIALKKGAK 84
            +FVRNL     + ++ENLFG+ GP+K+V +IK   D+G + +    RGF FV+FA+E DA  A  AL+     GRKLC +IA  K  K
Sbjct:    5 IFVRNLAYGVSQQELENLFGDIGPVKKVSVIK---DKGKRKTDMLTRGFAFVKFAMESDAKAAMEALNNTDYQGRKLCIDIAKDKAGK 89          
BLAST of mRNA_P-wetherbeei_contig17408.1.1 vs. uniprot
Match: A0A2D4BNT5_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNT5_PYTIN)

HSP 1 Score: 73.9 bits (180), Expect = 1.650e-13
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 0
Query:    1 VFVRNLPVEFLEPDIENLFGEFGPIKRVDLIKTMDDEGIKTS-RGFGFVRFALEEDAGKAAAALHGKFVNGRK-LCCEIALKKG 82
            VFVRNLP +  +  +E +FGE GP+K+VD+IK    +  +T+ RGF FVRFA+  DA  A   LH     GRK L  EIA +KG
Sbjct:  247 VFVRNLPFDVTQDALEQVFGEIGPVKKVDVIKDKGKQKSETTTRGFAFVRFAMSADAEAAIQQLHQSDFRGRKMLVAEIAKEKG 330          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17408.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCM5_9STRA4.100e-2870.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G584_ECTSI2.340e-2166.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CR96_9STRA1.500e-1550.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7T7L7_9STRA2.840e-1548.81Rna-binding protein 28 n=1 Tax=Nannochloropsis gad... [more]
A0A7S1U6V6_9STRA7.250e-1549.38Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8K1CP94_PYTOL4.700e-1449.41Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S4F0N5_CHRCT1.160e-1344.16Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
K3WMW4_GLOUD1.630e-1346.51Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A1V9ZKF3_9STRA1.640e-1345.45Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A2D4BNT5_PYTIN1.650e-1348.81Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 1..76
e-value: 1.5E-15
score: 67.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 1..73
e-value: 2.4E-19
score: 68.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 1..80
score: 16.858295
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..84
e-value: 2.9E-21
score: 78.0
NoneNo IPR availablePANTHERPTHR15597:SF22RNA-BINDING FOX PROTEIN 1, ISOFORM Hcoord: 2..78
NoneNo IPR availablePANTHERPTHR15597ATAXIN 2-BINDING PROTEIN 1-RELATEDcoord: 2..78
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 1..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17408contigP-wetherbeei_contig17408:19..270 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17408.1.1mRNA_P-wetherbeei_contig17408.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17408 19..270 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17408.1.1 ID=prot_P-wetherbeei_contig17408.1.1|Name=mRNA_P-wetherbeei_contig17408.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=84bp
VFVRNLPVEFLEPDIENLFGEFGPIKRVDLIKTMDDEGIKTSRGFGFVRF
ALEEDAGKAAAALHGKFVNGRKLCCEIALKKGAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf