mRNA_P-wetherbeei_contig17382.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17382.1.1 vs. uniprot
Match: UPI001AD6A7A0 (DUF6531 domain-containing protein n=1 Tax=Microbispora triticiradicis TaxID=2200763 RepID=UPI001AD6A7A0) HSP 1 Score: 131 bits (329), Expect = 3.630e-31 Identity = 99/242 (40.91%), Postives = 131/242 (54.13%), Query Frame = 1
Query: 4 YGSQGTYSSRLTSPAAPSYAWTLNETSGTTATASYGGAGSNGTYSVSGVTLNQPGAPTGITDASVTLSGGQIQIPTSTIA--GSGKTFTMWFKTTSNGVLLSKNSVAVGAGSSSSHNPVLYVDNNGYLRANDYSVFNSSNKTP-------QPVNDGLWHHVVFAVSATDQTLYVDGAKVGTVSGAVDDTGWPFNYAYIGNG----WTGGWADA---ASGWMPFQGSIDEVAIYSTVFTDADV 681
YGS Y +R+ Y W LNETSGT+A G G+ TYS VTL Q GA G TD++VT++ G +++P + +A + +F WFKTT+NG++LS A + + PV+YV +G LRA TP VN+G WHHVV V T +TLY+DG VGT G+ D WP N A +GNG W G W A A+ PF+GS+DEVA+Y T A+V
Sbjct: 336 YGSGSQYRTRVLDSDPVGY-WRLNETSGTSAK-DLGWGGAAATYS--SVTLGQAGALAGTTDSAVTVTAGSVKLPGNVLARLSTQLSFETWFKTTTNGMVLS---AASTVSNGLPNRPVIYVGTDGKLRAQFLERPEMGQPTPILPVTSSTAVNNGAWHHVVLTVDGTSETLYLDGQAVGTQPGSQFDQ-WPANAA-VGNGAMGSWAGSWPSAPTSATSTFPFKGSLDEVAVYDRPLTAAEV 568
BLAST of mRNA_P-wetherbeei_contig17382.1.1 vs. uniprot
Match: UPI00194DDB39 (polymorphic toxin-type HINT domain-containing protein n=1 Tax=Acrocarpospora phusangensis TaxID=1070424 RepID=UPI00194DDB39) HSP 1 Score: 131 bits (329), Expect = 3.690e-31 Identity = 97/242 (40.08%), Postives = 133/242 (54.96%), Query Frame = 1
Query: 4 YGSQGTYSSRLTSPAAPSYAWTLNETSGTTATASYGGAGSNGTYSVSGVTLNQPGAPTGITDASVTLSGGQIQIPTSTIA--GSGKTFTMWFKTTSNGVLLSKNSVAVGAGSSSSHNPVLYVDNNGYLRANDYSVFNSSNKTP-------QPVNDGLWHHVVFAVSATDQTLYVDGAKVGTVSGAVDDTGWPFNYAYIGNGWTGGWAD-------AASGWMPFQGSIDEVAIYSTVFTDADV 681
YG+ Y +R+ SY W LNETSGT A G AG+ TY+ TL Q GA G D +V+++ G +++P +T+A + +F +WFKTT NGVLLS S A S+ PV+YV N+G LRA + +P VN+G WHH V V+ T +TLY+DG VGT GA D WP ++A +GNG G WA + + PF+G++DEVA+Y T A+V
Sbjct: 365 YGTGSQYRTRVLDSDPVSY-WRLNETSGTVA-GDLGWAGNPATYT--SATLAQAGALAGTLDTAVSMTAGHVRLPANTLARLSTFLSFEVWFKTTQNGVLLSAASTAT---SNVPRQPVIYVGNDGKLRAQYLERPETGGPSPILPITSAAAVNNGQWHHAVLTVNGTSETLYLDGQPVGTQPGAQFDQ-WP-SFASVGNGVMGAWASFWPSAPTSTTATFPFKGTLDEVAVYERPLTAAEV 597
BLAST of mRNA_P-wetherbeei_contig17382.1.1 vs. uniprot
Match: A0A841CXH3_PLAVE (RHS repeat-associated protein n=3 Tax=Planomonospora venezuelensis TaxID=1999 RepID=A0A841CXH3_PLAVE) HSP 1 Score: 119 bits (298), Expect = 4.980e-27 Identity = 100/235 (42.55%), Postives = 125/235 (53.19%), Query Frame = 1
Query: 4 YGSQGTYSSRLTSPAAPSYAWTLNETSGTTATASYGGAGSNGTYSVSGVTLNQPGAPTGITDASVTLSGG-QIQIPTSTIAG--SGKTFTMWFKTTSNGVLLSKNSVAVGAGSSSSHNPVLYVDNNGYLRANDYSVFNSSNKTPQP----VNDGLWHHVVFAVSATDQTLYVDGAKVGTVSGAVDDTGWPFNYAYIGNGWTGG-WADA-ASGWMPFQGSIDEVAIYSTVFTDADV 681
YG Y S + A Y W LNETSGTTA S G G+ TY TL QPGA G D S SGG ++ +P ++A +F WFKTTS G +LS V GAG +LYV N+G LR V S+ P VNDG WHHVV ++ T+Q +++DG + G ++G TGWP N A +G G G W A ASG PF G IDEVA+Y+ T A+V
Sbjct: 313 YGDGSLYRSGVLDSDALGY-WRLNETSGTTAADSGWGTGA-ATYR--SATLAQPGALAGTADTSAKFSGGGKLTLPPDSLARLQGAASFETWFKTTSPGTVLS---VGSGAG-------LLYVGNDGKLRGQLRRVQGSTPIAPITSAGVVNDGTWHHVVLTLTGTEQKMFLDGQQAGVLTGT-PATGWP-NTAVVGTGTISGTWPSAPASGAFPFNGQIDEVALYAKPLTAAEV 531
BLAST of mRNA_P-wetherbeei_contig17382.1.1 vs. uniprot
Match: A0A544Y6G8_9ACTN (HintN domain-containing protein n=2 Tax=Microbispora hainanensis TaxID=568844 RepID=A0A544Y6G8_9ACTN) HSP 1 Score: 118 bits (296), Expect = 9.330e-27 Identity = 89/224 (39.73%), Postives = 119/224 (53.12%), Query Frame = 1
Query: 64 WTLNETSGTTATASYGGAGSNGTYSVSGVTLNQPGAPTGITDASVTLSGGQIQIPTSTIA--GSGKTFTMWFKTTSNGVLLSKNSVAVGAGSSSSHNPVLYVDNNGYLRANDYSVFNSSNKTP-------QPVNDGLWHHVVFAVSATDQTLYVDGAKVGTVSGAVDDTGWPFNYAYIGNG----WTGGWADA---ASGWMPFQGSIDEVAIYSTVFTDADVAS 687
W LNE SGT+A G G TYS VTL Q GA G D +V+++ G +++P + +A + +F WFKTT+NG++LS +S+ G + PV+YV +G LRA TP VN+G WHHVV V T +TLY+DG VG+ G D WP A +GNG W G W A A+ PF+GS+DEVA+Y T +V S
Sbjct: 505 WRLNEASGTSAK-DLGWGGVAATYS--SVTLGQAGALAGTADTAVSMTAGSVKLPGNVLARLSTQLSFETWFKTTTNGMVLSADSMVSGG---LPNRPVIYVGTDGKLRAQFLERPEMGQPTPILPITSSTAVNNGAWHHVVLTVGGTSETLYLDGQVVGSQPGYQFDP-WPATAA-VGNGVMGSWAGSWPSAPTSATSSFPFKGSLDEVAVYDRPLTATEVQS 720
BLAST of mRNA_P-wetherbeei_contig17382.1.1 vs. uniprot
Match: A0A7X0EX08_9ACTN (RHS repeat-associated protein n=1 Tax=Nonomuraea muscovyensis TaxID=1124761 RepID=A0A7X0EX08_9ACTN) HSP 1 Score: 116 bits (291), Expect = 4.190e-26 Identity = 96/236 (40.68%), Postives = 130/236 (55.08%), Query Frame = 1
Query: 4 YGSQGTYSSRLTSPAAPSYAWTLNETSGTTATASYGGAGSNGTYSVSGVTLNQPGAPTGITDASVTLSGGQ-IQIPTSTIA--GSGKTFTMWFKTTSNGVLLSKNSVAVGAGSSS--SHNPVLYVDNNGYLRANDYSVFNSSNKTPQPVNDGLWHHVVFAVSATDQTLYVDGAKVGTVSGAVDDTGWPFNYAYIGNGWTGGWAD----AASGWMPFQGSIDEVAIYSTVFTDADVA 684
YG+ Y SR+ A P W L E SGT A A A + TY VTLN+PGA TG D + + G +++PT+ I G + +WFKT+++GVL A GA ++ +H P+LYV +G LR + +V N+ + PVNDG WHH V VS TDQ LY+DG +VGT+SG+V T W A +GNG T A P QG+IDEVA+Y T+ ++A
Sbjct: 98 YGTGSQYRSRVLD-ADPFAYWRLGENSGTVA-ADQTPAERHATYQ--SVTLNEPGALTGNPDTAAKFAAGSALKLPTNIIPHLGDQLSLELWFKTSASGVL-----AAAGAQQTNGAAHGPMLYVGTDGRLRGSLGTV-NNPITSAGPVNDGTWHHAVLTVSGTDQALYLDGQRVGTLSGSV--TAWR-QLASVGNGVTDPAVSPAVPATKQAFPLQGAIDEVALYGQPLTETEIA 320
BLAST of mRNA_P-wetherbeei_contig17382.1.1 vs. uniprot
Match: A0A3M1H5I6_9BACT (LamG domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1H5I6_9BACT) HSP 1 Score: 111 bits (277), Expect = 8.490e-26 Identity = 85/210 (40.48%), Postives = 111/210 (52.86%), Query Frame = 1
Query: 64 WTLNETSGTTATASYGGAGSNGTYSVSGVTLNQPGAPTGITDASVTLSGGQIQIPTSTIA-GSGKTFTM--WFKTTSNGVLLSKNSVAVGAGSSSSHNPVLYVDNNGYLRANDYSVFNSSNKTPQPVNDGLWHHVVFAVS-ATDQTLYVDGAKVGTVSGAVDDTGWPFNYAYIGNGWTGGWADAASGWMPFQGSIDEVAIYSTVFTDADV 681
W L ETSGTTA+ + G G NGTY+ +G +L PGA G T A + + IP G+ +FT+ WF+TT+ GV+ + A + P LYVD G LR +++ T VNDG+WHHVV AVS A QT+Y+DGA VGT SG +D YA G G+T W GW F G+IDE A Y + + V
Sbjct: 41 WRLGETSGTTASDATGN-GENGTYT-NGPSLGVPGAVAGDTAAGLDGIDDYVAIPNFPYRYGNTGSFTVEAWFQTTTGGVIFGYQNTPAFA-IPGEYVPALYVDTAGLLRGKFWNL--PQIITTAAVNDGVWHHVVIAVSGAGQQTMYLDGAVVGTSSGTLDRLS--MTYAQFGTGYTAAWQGGNGGWYSFNGAIDEAAFYGHALSSSRV 243
BLAST of mRNA_P-wetherbeei_contig17382.1.1 vs. uniprot
Match: A0A2A2YSW8_9ACTN (Laminin G n=1 Tax=Streptomyces sp. SA15 TaxID=934019 RepID=A0A2A2YSW8_9ACTN) HSP 1 Score: 112 bits (281), Expect = 9.420e-25 Identity = 84/217 (38.71%), Postives = 117/217 (53.92%), Query Frame = 1
Query: 49 APSYAWTLNETSGTTATASYGGAGSNGTYSVSGVTLNQPGAPTGITDASVTLSGGQ--IQIPTSTIAGSGK-TFTMWFKTTSN--GVLLSKNSVAVGAGSSSSHNPVLYVDNNGYLRANDYSVFNSSNKTP----QPVNDGLWHHVVFAVSATDQTLYVDGAKVGTVSGAVDDTGWPFNYAYIGNGW-TGGWADAASGWMPFQGSIDEVAIYSTVFT 669
AP+ W L+ET G T ++ GGAG TY G + G G D + G+ +Q+P AG+ + MWF+TTS VLL + +G + +S P L +D G LR Y + +S TP Q V DG WHHVV + + T QTLY+DG KVG++SG + D P YAY+G G+ + GW + G FQG++DEVA+Y + T
Sbjct: 1534 APAAYWRLDETDGPTLSSEVGGAGMAATYHPGGSSGLDTGGVFGPGDDRALILDGKSDVQVPGDVFAGATNLSAEMWFRTTSTDPAVLLGFQNAPLGQ-TPTSWRPALNIDGAGKLRGEFY-LSGASGATPIVSAQAVTDGAWHHVVLSGAGTTQTLYLDGVKVGSLSGTITDQSRP--YAYVGGGYGSSGWMGVSEGTYRFQGTLDEVALYRSTLT 1746
BLAST of mRNA_P-wetherbeei_contig17382.1.1 vs. uniprot
Match: A0A438MAQ5_9ACTN (Intein/RHS repeat-associated protein n=2 Tax=Nonomuraea polychroma TaxID=46176 RepID=A0A438MAQ5_9ACTN) HSP 1 Score: 112 bits (279), Expect = 1.700e-24 Identity = 84/214 (39.25%), Postives = 117/214 (54.67%), Query Frame = 1
Query: 64 WTLNETSGTTATASYGGAGSNGTYSVSGVTLNQPGAPTGITDASVTLSGGQI-QIPTSTIAGSGKTFTM--WFKTTSNGVLLSKNSVAVGAGSSSSHNPVLYVDNNGYLRANDYSVFNSSNKTPQPVNDGLWHHVVFAVSATDQTLYVDGAKVGTVSGAVDDTGWPFNYAYIGNGWT----GGWADAASGWMPFQGSIDEVAIYSTVFTDADVA 684
W L E +G T+ G + TY G+TL QPGA TD + T + G + ++P++TI G ++ WFKTT +GV+++ + G+G + +LYV +G LR + +V T VNDG WHHV V+ DQTLY+DG +VGT++G V T W YA +GNG T AA PFQG +DEVA+Y T A+VA
Sbjct: 336 WRLGEAAGATSGEDLGTGAGDLTYQ--GITLGQPGALAATTDTAATFAAGSVVKLPSNTIPHLGDQLSVETWFKTTQSGVIMAAGTAQNGSGLA--RGAMLYVGTDGKLRGSLDAVTTPVTSTGA-VNDGQWHHVALTVAGQDQTLYLDGQQVGTMTGTV--TSWR-TYATLGNGVTDPAKSPAVPAAVQAFPFQGQLDEVALYGKPLTAAEVA 541
BLAST of mRNA_P-wetherbeei_contig17382.1.1 vs. uniprot
Match: UPI0013B473C9 (DUF6531 domain-containing protein n=1 Tax=Nonomuraea lactucae TaxID=2249762 RepID=UPI0013B473C9) HSP 1 Score: 110 bits (276), Expect = 4.260e-24 Identity = 93/235 (39.57%), Postives = 126/235 (53.62%), Query Frame = 1
Query: 4 YGSQGTYSSRLTSPAAPSYAWTLNETSGTTATASYGGAGSNGTYSVSGVTLNQPGAPTGITDASVTLSGGQI-QIPTSTIA--GSGKTFTMWFKTTSNGVLLSKNSVAVGAGSSS--SHNPVLYVDNNGYLRANDYSVFNSSNKTPQPVNDGLWHHVVFAVSATDQTLYVDGAKVGTVSGAVDDTGWPFNYAYIGNGWTGGWAD----AASGWMPFQGSIDEVAIYSTVFTDADV 681
YGS Y SR+ +Y W L E SGT A A A + TY VTL QPGA D + + + G + ++P++ ++ G + MWFKT+++GVL VA G+ S+ +H P+LYV +G LR + +V N T VNDG WHHVV S Q LY+DG KVGT++G V TGW A +GNG T A P QG+IDEVA+Y T+A++
Sbjct: 456 YGSGSQYRSRVLDGDPFAY-WRLGEASGTVA-ADQSQAERHATYQ--SVTLGQPGALAATPDTAASFTTGSVLKLPSNIVSHLGDQVSLEMWFKTSASGVL-----VAAGSQQSNGAAHGPMLYVGTDGRLRGSLGTVTNPIT-TSGAVNDGAWHHVVLTASGASQALYLDGQKVGTLTGTV--TGWR-QLASVGNGVTDPAVSPAVPATQQAFPLQGAIDEVALYGQPLTEAEI 677
BLAST of mRNA_P-wetherbeei_contig17382.1.1 vs. uniprot
Match: A0A1X4I8Y9_9ACTN (Laminin G n=1 Tax=Streptomyces sp. 13-12-16 TaxID=1570823 RepID=A0A1X4I8Y9_9ACTN) HSP 1 Score: 110 bits (274), Expect = 8.040e-24 Identity = 86/218 (39.45%), Postives = 116/218 (53.21%), Query Frame = 1
Query: 49 APSYAWTLNETSGTTATASYGGAGSNGTY---SVSGVTLNQPGAPTGITDASVTLS-GGQIQIPTSTIAGSGK-TFTMWFKTTS-NGVLLSKNSVAVGAGSSSSHNPVLYVDNNGYLRANDYSVFNSSNKTP----QPVNDGLWHHVVFAVSATDQTLYVDGAKVGTVSGAVDDTGWPFNYAYIGNGW-TGGWADAASGWMPFQGSIDEVAIYSTVFT 669
AP+ W L E GT + GG G T+ + L+Q GA D +VTL GG ++IP S + G+ + MWF+TT + VLL + VG + +S P L +D +G LR Y + S TP Q V DG WHHVV + S T QTLY+DG KVG++ GA+DD P Y Y+G G+ + GW A G G +DEVA+Y + T
Sbjct: 1545 APAAYWRLGEDDGTALPSEVGGPGMYATFHPDTTDASKLDQSGAFGAGDDRAVTLGKGGTVEIPGSILTGTTDLSAEMWFRTTKPSAVLLGFQNAPVGQ-TPTSWRPALNIDGSGKLRGEFY-LSGVSGATPIVSSQTVTDGDWHHVVLSGSGTTQTLYLDGVKVGSLDGAIDDQSRP--YVYVGGGYGSSGWMGLAGGTYYLDGQVDEVALYRSALT 1758 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17382.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17382.1.1 >prot_P-wetherbeei_contig17382.1.1 ID=prot_P-wetherbeei_contig17382.1.1|Name=mRNA_P-wetherbeei_contig17382.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=239bp SYGSQGTYSSRLTSPAAPSYAWTLNETSGTTATASYGGAGSNGTYSVSGVback to top mRNA from alignment at P-wetherbeei_contig17382:64..780+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17382.1.1 ID=mRNA_P-wetherbeei_contig17382.1.1|Name=mRNA_P-wetherbeei_contig17382.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=717bp|location=Sequence derived from alignment at P-wetherbeei_contig17382:64..780+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17382:64..780+ >mRNA_P-wetherbeei_contig17382.1.1 ID=mRNA_P-wetherbeei_contig17382.1.1|Name=mRNA_P-wetherbeei_contig17382.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=717bp|location=Sequence derived from alignment at P-wetherbeei_contig17382:64..780+ (Phaeothamnion wetherbeei SAG_119_79)back to top |