mRNA_P-wetherbeei_contig17296.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17296.1.1
Unique NamemRNA_P-wetherbeei_contig17296.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17296.1.1 vs. uniprot
Match: UPI0019038085 (flagellar M-ring protein FliF n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI0019038085)

HSP 1 Score: 434 bits (1117), Expect = 2.980e-146
Identity = 218/381 (57.22%), Postives = 301/381 (79.00%), Query Frame = 1
Query:   40 LGLKRLMTLGIAGIAVFTLVATSSYYLSLPQREVIYSGLDLQDVSQIGAVLEESGVPFDVNPEGTAVLVDYGNTARARMLLAEKGLPKGDKSGYELFDNLGSMGLTSFMQQITKVRALEGELARTIQLMKGIKAARVHIVLPQEGTFRSIKEPPSASVIIRTEMSDGKLYAAAIQQLVGAAIPGMTKDMVTVLSTDGSILASHEDSLTAAPGNIVTLEKTLAKDIEERVGMTLVPFLGLENFRISVTAKLNTDRKQTNETIYDPESRVERSVRTVKELGEAQNNNSQSAVTVDQNIPTETTPTAAGDQSTEKNDKREELTNYEINSKSVATTSEGYSIENLSIAVIINKVQLSKGLGGSPTPEQMTAKMTEIQSLISSASG 1182
            LG +RLM L + GI+V   V  ++Y+LS P  EV+Y+GLD QDV+++GA L E+G+PFDVN EGTAV+V YG TA+ARMLLAEKGLP+ + +GYELFDN+GS+GLTSFMQ++T+VR LEGE+ARTIQ MK IKAARVHIV+P  G+FR  ++PPSASV+IRT+ SD    A AI+ LV AA+PG++ D VTVL+T G +LAS  D  +AAPG +  LEK+++++I++ +  TLVP+LGL NF++SV A+LNTD+KQT+ETI+DPESR ERS+RTVKE G  QN++ +S+V+V QN+P     T   D ST+++++REELTN+E+NSK+++T S+GY IENLS+AV++N+ ++ + LG    PE + A+  EIQ L++SA+G
Sbjct:   17 LGARRLMALAVIGISVLAFVGLAAYFLSRPSNEVLYTGLDAQDVTRVGAALTEAGIPFDVNAEGTAVMVRYGQTAKARMLLAEKGLPRSETAGYELFDNMGSLGLTSFMQEVTRVRVLEGEIARTIQSMKDIKAARVHIVMPDGGSFRRAQQPPSASVVIRTDTSDEFGSAQAIRHLVAAAVPGLSVDQVTVLNTSGVLLASGGDMASAAPGKLAGLEKSVSQEIQDNISKTLVPYLGLANFQVSVAARLNTDKKQTSETIFDPESRAERSIRTVKETGTTQNSSGKSSVSVSQNLPDGQRDTPGSDNSTQESERREELTNFEMNSKTISTVSDGYRIENLSVAVVVNRDRIVELLGKDAKPEDIQAQTQEIQQLVASAAG 397          
BLAST of mRNA_P-wetherbeei_contig17296.1.1 vs. uniprot
Match: A0A6G6WXC5_9HYPH (Flagellar M-ring protein n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6WXC5_9HYPH)

HSP 1 Score: 432 bits (1110), Expect = 3.520e-145
Identity = 216/389 (55.53%), Postives = 301/389 (77.38%), Query Frame = 1
Query:   16 RLQLGLASLGLKRLMTLGIAGIAVFTLVATSSYYLSLPQREVIYSGLDLQDVSQIGAVLEESGVPFDVNPEGTAVLVDYGNTARARMLLAEKGLPKGDKSGYELFDNLGSMGLTSFMQQITKVRALEGELARTIQLMKGIKAARVHIVLPQEGTFRSIKEPPSASVIIRTEMSDGKLYAAAIQQLVGAAIPGMTKDMVTVLSTDGSILASHEDSLTAAPGNIVTLEKTLAKDIEERVGMTLVPFLGLENFRISVTAKLNTDRKQTNETIYDPESRVERSVRTVKELGEAQNNNSQSAVTVDQNIPTETTPTAAGDQSTEKNDKREELTNYEINSKSVATTSEGYSIENLSIAVIINKVQLSKGLGGSPTPEQMTAKMTEIQSLISSASG 1182
            RL   +  LG +R+M L + G++V  +V  ++Y+LS P  E++Y+GLD QDV+++GA L E+G+PFDVN EGTA++V YG TA+ARMLLAEKGLP+ + +GYELFDN+GS+GLTSFMQQ+T+VR LEGE+ARTIQ MKGIKAARVHIV+P  G+FR  ++ P+ASV+IRT+ SD    A AI+ +V AA+PG+  D VTVL+T G +LAS  D   AAPG +  LE+T+ +++++ +  TLVP+LGLENF++SV A+LNTD+KQTNETI+DPESR ERSVR VKE G  QN + +S+V+V QN+P       + D ST+++++REELTN+EINSK+++T S+GY IENLS+AV++N+ ++ + LG    PE M A+  EI+ L++SA+G
Sbjct:    9 RLWGSIVGLGARRIMALAVIGLSVLAVVGLAAYFLSRPSNEILYTGLDAQDVTRVGAALTEAGIPFDVNAEGTAIMVRYGQTAKARMLLAEKGLPRSETAGYELFDNMGSLGLTSFMQQVTRVRVLEGEIARTIQSMKGIKAARVHIVMPDGGSFRRTQQQPTASVVIRTDTSDEFGSAQAIRHMVAAAVPGLAVDQVTVLNTSGVLLASGGDLADAAPGKLAGLERTVGQEVQDNIAKTLVPYLGLENFQVSVAARLNTDKKQTNETIFDPESRAERSVRVVKESGTTQNTSGKSSVSVTQNLPEGQQEAPSADNSTQESERREELTNFEINSKTISTVSDGYRIENLSVAVVVNRDRIVELLGKDAKPEDMQAQTREIEQLVASAAG 397          
BLAST of mRNA_P-wetherbeei_contig17296.1.1 vs. uniprot
Match: UPI000552A3BC (flagellar M-ring protein FliF n=1 Tax=Beijerinckia mobilis TaxID=231434 RepID=UPI000552A3BC)

HSP 1 Score: 429 bits (1104), Expect = 3.440e-144
Identity = 219/389 (56.30%), Postives = 297/389 (76.35%), Query Frame = 1
Query:   16 RLQLGLASLGLKRLMTLGIAGIAVFTLVATSSYYLSLPQREVIYSGLDLQDVSQIGAVLEESGVPFDVNPEGTAVLVDYGNTARARMLLAEKGLPKGDKSGYELFDNLGSMGLTSFMQQITKVRALEGELARTIQLMKGIKAARVHIVLPQEGTFRSIKEPPSASVIIRTEMSDGKLYAAAIQQLVGAAIPGMTKDMVTVLSTDGSILASHEDSLTAAPGNIVTLEKTLAKDIEERVGMTLVPFLGLENFRISVTAKLNTDRKQTNETIYDPESRVERSVRTVKELGEAQNNNSQSAVTVDQNIPTETTPTAAGDQSTEKNDKREELTNYEINSKSVATTSEGYSIENLSIAVIINKVQLSKGLGGSPTPEQMTAKMTEIQSLISSASG 1182
            RL   L  LG+KRL+TLG+ G++VF +   + Y+LS P +E++YSGLD QDVS+I + L+E+ +PFDVN +G AVLV +G TARARMLLAEKGLP    +G EL+D LGS+GLTSFMQ++T+VRALEGEL+RTIQLM G+KAARVHIV+P+EG+FR +++PPSASV++R + +D    A AI+ LV +A+PGMT + VTVL+T+G +LAS  D++  AP  ++ LEK ++++I + +  TL P+LGL NF++SV   LNTD+KQTNETIY+P+S+VERS R  K    +QN+  QS  TV++N+P ETT +  G QSTE++ KREELTNYEI+SK + T S GY IE LS+AV+IN+  L   LG  PTPE +T +M EI+ L++SASG
Sbjct:    9 RLWANLLKLGMKRLITLGVIGVSVFAMTGLAGYFLSRPAQEILYSGLDRQDVSRIASALKEADIPFDVNADGNAVLVRFGETARARMLLAEKGLPNSPNAGNELYDKLGSLGLTSFMQEVTRVRALEGELSRTIQLMHGVKAARVHIVMPEEGSFRRVRQPPSASVVVRMDSNDESGAAKAIRHLVASAVPGMTVEEVTVLNTEGVLLASGADTVDGAPSGMMVLEKAVSREIIDNIRKTLTPYLGLRNFQVSVATHLNTDKKQTNETIYNPDSKVERSTRVTKHNQNSQNSTVQSPTTVERNLPQETTRSDDGKQSTEESQKREELTNYEISSKVINTVSGGYGIETLSVAVLINRASLISSLGEKPTPEALTKQMEEIEQLVASASG 397          
BLAST of mRNA_P-wetherbeei_contig17296.1.1 vs. uniprot
Match: A0A370HCL9_9HYPH (Flagellar M-ring protein n=1 Tax=Microvirga subterranea TaxID=186651 RepID=A0A370HCL9_9HYPH)

HSP 1 Score: 428 bits (1100), Expect = 1.520e-143
Identity = 222/389 (57.07%), Postives = 299/389 (76.86%), Query Frame = 1
Query:   16 RLQLGLASLGLKRLMTLGIAGIAVFTLVATSSYYLSLPQREVIYSGLDLQDVSQIGAVLEESGVPFDVNPEGTAVLVDYGNTARARMLLAEKGLPKGDKSGYELFDNLGSMGLTSFMQQITKVRALEGELARTIQLMKGIKAARVHIVLPQEGTFRSIKEPPSASVIIRTEMSDGKLYAAAIQQLVGAAIPGMTKDMVTVLSTDGSILASHEDSLTAAPGNIVTLEKTLAKDIEERVGMTLVPFLGLENFRISVTAKLNTDRKQTNETIYDPESRVERSVRTVKELGEAQNNNSQSAVTVDQNIPTETTPTAAGDQSTEKNDKREELTNYEINSKSVATTSEGYSIENLSIAVIINKVQLSKGLGGSPTPEQMTAKMTEIQSLISSASG 1182
            +L   L  LG++RL+ LG+ G+ VF  V   +YYLS P +E +Y+GL+ +DVS+IG+VL ++G+PFDV+ +GTAVLV YGNTA+ARMLLA+KGLP+  KSGYELF++LGS+GLTSFMQ+IT+VRALEGE+ARTIQ MKG+KAARVHIVLP  G+FR  ++P SASV++RTE +D    A AI+ LV AAIPGM  D VTVL+TDG +L + +D  +AA G + TLEK ++++I++ V  TL P+LG+ NF ISV A+LNTD+  T ETIYDPES+VERS+RTVKE   +QN N+Q   TV QN+P E      GD S+E N +REELTNYEI+SK+V T SEGY+I+NLS+AV++N+ +L+    G  +   + A++TEI+ L++SA+G
Sbjct:    9 KLWANLMELGVRRLVALGVIGLVVFLGVGLGAYYLSRPAQETLYTGLEREDVSRIGSVLTDAGIPFDVSADGTAVLVRYGNTAQARMLLAQKGLPQSSKSGYELFNDLGSLGLTSFMQEITRVRALEGEIARTIQTMKGVKAARVHIVLPDRGSFRREQQPASASVVVRTEPADDMGSAQAIRHLVAAAIPGMKTDKVTVLNTDGMLLMAGDDGASAATGKMATLEKNVSREIQDNVRRTLAPYLGIGNFEISVAARLNTDKTNTTETIYDPESKVERSIRTVKETEVSQNRNAQRPTTVQQNLPEERVRAENGDSSSEDNQRREELTNYEISSKTVQTISEGYAIKNLSVAVLVNRSRLAAQPNGEASQADVDARITEIEQLVASAAG 397          
BLAST of mRNA_P-wetherbeei_contig17296.1.1 vs. uniprot
Match: A0A2W4QEU1_9PROT (Flagellar M-ring protein n=6 Tax=Proteobacteria TaxID=1224 RepID=A0A2W4QEU1_9PROT)

HSP 1 Score: 427 bits (1099), Expect = 1.670e-143
Identity = 221/381 (58.01%), Postives = 300/381 (78.74%), Query Frame = 1
Query:   40 LGLKRLMTLGIAGIAVFTLVATSSYYLSLPQREVIYSGLDLQDVSQIGAVLEESGVPFDVNPEGTAVLVDYGNTARARMLLAEKGLPKGDKSGYELFDNLGSMGLTSFMQQITKVRALEGELARTIQLMKGIKAARVHIVLPQEGTFRSIKEPPSASVIIRTEMSDGKLYAAAIQQLVGAAIPGMTKDMVTVLSTDGSILASHEDSLTAAPGNIVTLEKTLAKDIEERVGMTLVPFLGLENFRISVTAKLNTDRKQTNETIYDPESRVERSVRTVKELGEAQNNNSQSAVTVDQNIPTETTPTAAGDQSTEKNDKREELTNYEINSKSVATTSEGYSIENLSIAVIINKVQLSKGLGGSPTPEQMTAKMTEIQSLISSASG 1182
            LG +RL+ LG+ G+AVF +V   +YYLS PQ+E +Y+GL  +DVS++GAVL+++G+PFDV+ +GT+VLV+YGNTARARMLLAEKGLP+   SGYELF++LGS+GLTSFMQ++T+VRALEGELARTIQ M GIKAARVHIVLP  G+FR   +P SASV+IRTE +D    A AI+ LV AAIPGM+ D VTVL+TDG+++ + +D+ +AA G + +LE+T++ +I++ V  TLVP+LGL NF +SV A+LNTDR +TNETIYDPESRVERSVRT++E   +QN N+Q+  TV QN+P E    + G+ S+E N +REE+TNYEI+SK+V T  +GY IE LSIAV++N+ +L+   G + T   +  +M EI+ L++SA+G
Sbjct:   17 LGTRRLIALGLIGLAVFLVVGLGAYYLSRPQQEPLYTGLSREDVSRMGAVLKDAGIPFDVSADGTSVLVNYGNTARARMLLAEKGLPQSANSGYELFNDLGSLGLTSFMQEVTRVRALEGELARTIQTMAGIKAARVHIVLPDRGSFRREAQPASASVVIRTETADSVTPARAIRHLVAAAIPGMSVDKVTVLNTDGTLVLAGDDATSAATGRMASLERTVSLEIQDNVRKTLVPYLGLSNFEVSVAARLNTDRTRTNETIYDPESRVERSVRTIRETEVSQNRNNQNPTTVQQNLPDEQVQASGGEVSSEDNQRREEVTNYEISSKTVETVRDGYRIERLSIAVLVNRERLAALAGPNATDAAIDQQMREIEQLVASAAG 397          
BLAST of mRNA_P-wetherbeei_contig17296.1.1 vs. uniprot
Match: UPI00056B42EF (flagellar M-ring protein FliF n=1 Tax=Methylocapsa aurea TaxID=663610 RepID=UPI00056B42EF)

HSP 1 Score: 426 bits (1095), Expect = 8.120e-143
Identity = 220/394 (55.84%), Postives = 300/394 (76.14%), Query Frame = 1
Query:    1 QDFLMRLQLGLASLGLKRLMTLGIAGIAVFTLVATSSYYLSLPQREVIYSGLDLQDVSQIGAVLEESGVPFDVNPEGTAVLVDYGNTARARMLLAEKGLPKGDKSGYELFDNLGSMGLTSFMQQITKVRALEGELARTIQLMKGIKAARVHIVLPQEGTFRSIKEPPSASVIIRTEMSDGKLYAAAIQQLVGAAIPGMTKDMVTVLSTDGSILASHEDSLTAAPGNIVTLEKTLAKDIEERVGMTLVPFLGLENFRISVTAKLNTDRKQTNETIYDPESRVERSVRTVKELGEAQNNNSQSAVTVDQNIPTETTPTAAGDQSTEKNDKREELTNYEINSKSVATTSEGYSIENLSIAVIINKVQLSKGLGGSPTPEQMTAKMTEIQSLISSASG 1182
            Q+ + RL   L  LG +RL+ L + G++VF +   + Y+LS P  EV+Y+GLD QDVS+IGA L+E+ + FDVN +G  VLV YG TARARMLLAEKGLP    +G ELFD LGS+GLTSFMQ+IT+VRALEGELARTIQLM+G+KAARVH+V+P EG+FR  ++PPSASV+IRTE++D    A AI+ LV AA+PGMT + VTVL+T+G +LAS  D    APG ++TLEKT++++I + +  TL P+LGL NF+ISV A+LNTD++QTNETI++PESRVERSV+  K+    QN+ +Q+  TV++N+P E T    G QS E++ KREELTNYE++SK++ T S GY I+NLS+AV++N+  L+ GLG   TPE +  ++ E++ L++SA+G
Sbjct:    4 QEQIERLWASLQKLGSRRLIALAMIGVSVFAMTGLAGYFLSRPALEVLYAGLDRQDVSRIGAALKEADISFDVNSDGNTVLVRYGETARARMLLAEKGLPNSPNAGNELFDKLGSLGLTSFMQEITRVRALEGELARTIQLMRGVKAARVHVVMPDEGSFRRTRQPPSASVVIRTEIADDVGAAKAIRHLVAAAVPGMTMEEVTVLNTEGVLLASGNDLADTAPGGMLTLEKTVSREILDNIRKTLTPYLGLRNFQISVAARLNTDKRQTNETIFNPESRVERSVKVTKQNQTLQNSTNQAPTTVERNLPQENTRADDGKQSNEESLKREELTNYELSSKTITTVSGGYGIDNLSVAVLVNRASLAAGLGEKATPEAIDRQLRELEQLVASAAG 397          
BLAST of mRNA_P-wetherbeei_contig17296.1.1 vs. uniprot
Match: UPI00142F98F1 (flagellar M-ring protein FliF n=2 Tax=Microvirga TaxID=186650 RepID=UPI00142F98F1)

HSP 1 Score: 424 bits (1090), Expect = 4.200e-142
Identity = 217/384 (56.51%), Postives = 294/384 (76.56%), Query Frame = 1
Query:   31 LASLGLKRLMTLGIAGIAVFTLVATSSYYLSLPQREVIYSGLDLQDVSQIGAVLEESGVPFDVNPEGTAVLVDYGNTARARMLLAEKGLPKGDKSGYELFDNLGSMGLTSFMQQITKVRALEGELARTIQLMKGIKAARVHIVLPQEGTFRSIKEPPSASVIIRTEMSDGKLYAAAIQQLVGAAIPGMTKDMVTVLSTDGSILASHEDSLTAAPGNIVTLEKTLAKDIEERVGMTLVPFLGLENFRISVTAKLNTDRKQTNETIYDPESRVERSVRTVKELGEAQNNNSQSAVTVDQNIPTETTPTAAGDQSTEKNDKREELTNYEINSKSVATTSEGYSIENLSIAVIINKVQLSKGLGGSPTPEQMTAKMTEIQSLISSASG 1182
            L  LG +RL  LGI G+AVF  V   +YYLS P +EV+Y+GL+ +DVS+IGA L+++ +PFDV+ +GTAVLV YG TA+ARM+LAEKGLP+  KSGYELF++LGS+GLTSFMQ++T+VRALEGE+ARTIQ MKG+KAARVHIV+P  G+FR  ++P SASV++RTE +D    A AI+ LV AAIPGM  D VTVL+TDG++L S +D    A G + +LE+ + ++I++ +  TL P+LGL NF +SV A+LNTD+  T+ETIY+PES+VERSVRTVKE   +QN +SQ   TV QNIP +      G+ S+E N +REELTNYEI+SK+V T S+GY+I+NLS+AV++N+ +L+   GG  T   + A++ EI+ L+SSA+G
Sbjct:   14 LLELGARRLAALGIIGLAVFLAVGLGAYYLSRPAQEVLYTGLEREDVSRIGAALKDAAIPFDVSADGTAVLVSYGKTAQARMILAEKGLPQSTKSGYELFNDLGSLGLTSFMQEVTRVRALEGEIARTIQTMKGVKAARVHIVMPDRGSFRREQQPASASVVVRTEQADDMASAQAIRHLVAAAIPGMKVDRVTVLNTDGTLLMSGDDGANVATGKMASLERVVGREIQDNIRKTLAPYLGLGNFEVSVAARLNTDKTNTSETIYNPESKVERSVRTVKETEVSQNRSSQKPTTVQQNIPNQQVRADGGENSSEDNQRREELTNYEISSKTVQTVSDGYAIKNLSVAVLVNRSRLATPSGGDQTRADIDARIAEIEQLVSSAAG 397          
BLAST of mRNA_P-wetherbeei_contig17296.1.1 vs. uniprot
Match: A0A1G5CVA5_9HYPH (Flagellar M-ring protein n=2 Tax=Microvirga TaxID=186650 RepID=A0A1G5CVA5_9HYPH)

HSP 1 Score: 423 bits (1088), Expect = 8.980e-142
Identity = 222/389 (57.07%), Postives = 293/389 (75.32%), Query Frame = 1
Query:   16 RLQLGLASLGLKRLMTLGIAGIAVFTLVATSSYYLSLPQREVIYSGLDLQDVSQIGAVLEESGVPFDVNPEGTAVLVDYGNTARARMLLAEKGLPKGDKSGYELFDNLGSMGLTSFMQQITKVRALEGELARTIQLMKGIKAARVHIVLPQEGTFRSIKEPPSASVIIRTEMSDGKLYAAAIQQLVGAAIPGMTKDMVTVLSTDGSILASHEDSLTAAPGNIVTLEKTLAKDIEERVGMTLVPFLGLENFRISVTAKLNTDRKQTNETIYDPESRVERSVRTVKELGEAQNNNSQSAVTVDQNIPTETTPTAAGDQSTEKNDKREELTNYEINSKSVATTSEGYSIENLSIAVIINKVQLSKGLGGSPTPEQMTAKMTEIQSLISSASG 1182
            RL   L  LG +RL  LG  G  VF  V   +YYLS P +E +Y+GLD +DVS++G VL+++GVPFDV+ +GTA+LV YGNTA+ARMLLAEKGLP   KSGYELF++LGS+GLTSFMQ++TKVRALEGELARTIQ MKG+KAARVHIVLP  G+FR  ++PPSASV+IRT  +D    A AI+ LV AAIPGM  D VT+++T+G++LAS +DS  A+ G +  LEKT+  +I++ +  TL P+LG+ NF ISV A+LNTD+  TNETI++PES+VERSVRTV+E   +QN   Q   TV QN+P E     A D S+E N +REELTN+EI+SK++ T S+GYSI+NLS+AV++NK +++  LG      ++ AK+ EI+ L+SSA+G
Sbjct:    9 RLWTSLMQLGARRLAALGAIGFVVFLAVGVGAYYLSRPAQETLYTGLDREDVSRMGTVLKDAGVPFDVSSDGTALLVSYGNTAQARMLLAEKGLPHSTKSGYELFNDLGSLGLTSFMQEVTKVRALEGELARTIQGMKGVKAARVHIVLPDRGSFRRDQQPPSASVVIRTSPADDTSQAQAIRHLVAAAIPGMAVDKVTIMNTEGTLLASGDDSTNASTGKLANLEKTVGLEIQDSIRRTLSPYLGIGNFEISVAARLNTDKVSTNETIFNPESKVERSVRTVRETEVSQNRAGQRPTTVQQNLPEEEVRAGASDSSSEDNQRREELTNFEISSKTIQTISDGYSIKNLSVAVLVNKSRIAALLGEGADAAEIDAKVAEIEQLVSSAAG 397          
BLAST of mRNA_P-wetherbeei_contig17296.1.1 vs. uniprot
Match: UPI0013779157 (flagellar M-ring protein FliF n=1 Tax=Microvirga arsenatis TaxID=2692265 RepID=UPI0013779157)

HSP 1 Score: 423 bits (1087), Expect = 1.190e-141
Identity = 220/389 (56.56%), Postives = 293/389 (75.32%), Query Frame = 1
Query:   16 RLQLGLASLGLKRLMTLGIAGIAVFTLVATSSYYLSLPQREVIYSGLDLQDVSQIGAVLEESGVPFDVNPEGTAVLVDYGNTARARMLLAEKGLPKGDKSGYELFDNLGSMGLTSFMQQITKVRALEGELARTIQLMKGIKAARVHIVLPQEGTFRSIKEPPSASVIIRTEMSDGKLYAAAIQQLVGAAIPGMTKDMVTVLSTDGSILASHEDSLTAAPGNIVTLEKTLAKDIEERVGMTLVPFLGLENFRISVTAKLNTDRKQTNETIYDPESRVERSVRTVKELGEAQNNNSQSAVTVDQNIPTETTPTAAGDQSTEKNDKREELTNYEINSKSVATTSEGYSIENLSIAVIINKVQLSKGLGGSPTPEQMTAKMTEIQSLISSASG 1182
            RL   L  LG +RL+ L   GI VF  V   +YYLS P +E +Y+GLD +DV ++GAVL+ESG+PFDV+ +GTA+LV YGNTA+ARMLLAEKGLP   KSGYELF++LGS+GLTSFMQ++TKVRALEGELARTIQ MKG+KAARVHIVLP+ G+FR  ++PPSASV+IRT  SD    A AI+ LV AAIPGM  D VTV++TDG++L S +D+  A+ G +  LEKT+  +I++ V  TL+P+LG+ NF ISV A+L+TD+  T+ETI++PES+VERS RT+KE   +QN + Q   TV QN+P E     +GD S+E N +REELTNYEI+SK++ T S+GY I+NLS+AV++NK +++  LG      ++  K+ EI+ L++SA G
Sbjct:    9 RLWSSLLQLGARRLLALAAIGIGVFLSVGVGAYYLSRPVQETLYTGLDREDVGRMGAVLKESGIPFDVSADGTAILVSYGNTAQARMLLAEKGLPHSTKSGYELFNDLGSLGLTSFMQEVTKVRALEGELARTIQGMKGVKAARVHIVLPERGSFRREQQPPSASVVIRTVPSDDASSAQAIRHLVAAAIPGMAVDKVTVMNTDGTLLMSGDDAANASTGKMARLEKTIGLEIQDNVRRTLMPYLGIGNFEISVAARLSTDKVSTSETIFNPESKVERSTRTIKETEVSQNKSGQKPTTVQQNLPEENVRAESGDSSSEDNQRREELTNYEISSKTIQTISDGYQIKNLSVAVLVNKARIASLLGDQTNSAELETKIAEIEQLVASAIG 397          
BLAST of mRNA_P-wetherbeei_contig17296.1.1 vs. uniprot
Match: A0A7C4XRQ0_9HYPH (Flagellar M-ring protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XRQ0_9HYPH)

HSP 1 Score: 422 bits (1085), Expect = 2.180e-141
Identity = 219/394 (55.58%), Postives = 295/394 (74.87%), Query Frame = 1
Query:    1 QDFLMRLQLGLASLGLKRLMTLGIAGIAVFTLVATSSYYLSLPQREVIYSGLDLQDVSQIGAVLEESGVPFDVNPEGTAVLVDYGNTARARMLLAEKGLPKGDKSGYELFDNLGSMGLTSFMQQITKVRALEGELARTIQLMKGIKAARVHIVLPQEGTFRSIKEPPSASVIIRTEMSDGKLYAAAIQQLVGAAIPGMTKDMVTVLSTDGSILASHEDSLTAAPGNIVTLEKTLAKDIEERVGMTLVPFLGLENFRISVTAKLNTDRKQTNETIYDPESRVERSVRTVKELGEAQNNNSQSAVTVDQNIPTETTPTAAGDQSTEKNDKREELTNYEINSKSVATTSEGYSIENLSIAVIINKVQLSKGLGGSPTPEQMTAKMTEIQSLISSASG 1182
            ++ L RL   L +LG +RL  L + GI VF  V   SYYLS P  E +Y GL+ QDVS+IGA L+E+G+ FDV  +GT VLV +G TA+ARMLLAEKGLP    SGYELFD LG MGLTSFMQ++T+VRALEGE+ARTIQ MKG+KAARVHIVLP  G+FR   +PPSASV+IRTE +     A AI+ LV AA+PGM  D VTVL+TDG+++A+  D   AAPG +  LEK++ K+++  V  TL P+LGL+NF +SV A++NTD++Q NET Y+PE++VERSVR VKE G +QN NS++A +V+QN+P +   T +GDQS+ +N++REELTNYE+N+K+++T S+GY IENL+IAV+IN+ +L   LG     E +  ++ E+++L+ SA+G
Sbjct:    4 REQLARLWSNLLALGARRLAALAVIGIGVFAAVGFGSYYLSRPDYETLYVGLNAQDVSRIGAALKEAGIAFDVGSDGTKVLVRHGQTAQARMLLAEKGLPSSANSGYELFDKLGPMGLTSFMQEVTRVRALEGEIARTIQAMKGVKAARVHIVLPDSGSFRRTPQPPSASVVIRTEWAGDASSAQAIRHLVAAAVPGMNVDQVTVLNTDGTVMAAAGDPEGAAPGRMAALEKSVGKELQHNVRKTLAPYLGLDNFEVSVAARINTDKRQINETEYNPETKVERSVRVVKETGSSQNVNSRAAASVEQNLPADQPSTRSGDQSSRQNERREELTNYEMNTKTISTLSDGYKIENLTIAVVINRKRLLASLGKDAGQEAIDRQLKELETLVGSAAG 397          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17296.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00190380852.980e-14657.22flagellar M-ring protein FliF n=1 Tax=Aestuariivir... [more]
A0A6G6WXC5_9HYPH3.520e-14555.53Flagellar M-ring protein n=1 Tax=Nordella sp. HKS ... [more]
UPI000552A3BC3.440e-14456.30flagellar M-ring protein FliF n=1 Tax=Beijerinckia... [more]
A0A370HCL9_9HYPH1.520e-14357.07Flagellar M-ring protein n=1 Tax=Microvirga subter... [more]
A0A2W4QEU1_9PROT1.670e-14358.01Flagellar M-ring protein n=6 Tax=Proteobacteria Ta... [more]
UPI00056B42EF8.120e-14355.84flagellar M-ring protein FliF n=1 Tax=Methylocapsa... [more]
UPI00142F98F14.200e-14256.51flagellar M-ring protein FliF n=2 Tax=Microvirga T... [more]
A0A1G5CVA5_9HYPH8.980e-14257.07Flagellar M-ring protein n=2 Tax=Microvirga TaxID=... [more]
UPI00137791571.190e-14156.56flagellar M-ring protein FliF n=1 Tax=Microvirga a... [more]
A0A7C4XRQ0_9HYPH2.180e-14155.58Flagellar M-ring protein n=1 Tax=Hyphomicrobiales ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17296contigP-wetherbeei_contig17296:259..1440 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog420324.KI911965_gene617
Preferred namefliF
PFAMsYscJ_FliF,YscJ_FliF_C
Model size1182
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02409
KEGG TC3.A.6.2,3.A.6.3
KEGG Pathwayko02040,map02040
Hectar predicted targeting categorysignal anchor
Exons1
Evalue1.42e-144
EggNOG OGsCOG1766@1|root,COG1766@2|Bacteria,1MUQR@1224|Proteobacteria,2TR6J@28211|Alphaproteobacteria,1JU1A@119045|Methylobacteriaceae
DescriptionThe M ring may be actively involved in energy transduction
Cds size1170
COG categoryN
BRITEko00000,ko00001,ko02035,ko02044
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186112.9952707-UTR-P-wetherbeei_contig17296:258..2701683186112.9952707-UTR-P-wetherbeei_contig17296:258..270Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17296 259..270 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186113.004451-CDS-P-wetherbeei_contig17296:270..14401683186113.004451-CDS-P-wetherbeei_contig17296:270..1440Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17296 271..1440 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17296.1.1prot_P-wetherbeei_contig17296.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17296 271..1440 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17296.1.1

>prot_P-wetherbeei_contig17296.1.1 ID=prot_P-wetherbeei_contig17296.1.1|Name=mRNA_P-wetherbeei_contig17296.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=390bp
MRLQLGLASLGLKRLMTLGIAGIAVFTLVATSSYYLSLPQREVIYSGLDL
QDVSQIGAVLEESGVPFDVNPEGTAVLVDYGNTARARMLLAEKGLPKGDK
SGYELFDNLGSMGLTSFMQQITKVRALEGELARTIQLMKGIKAARVHIVL
PQEGTFRSIKEPPSASVIIRTEMSDGKLYAAAIQQLVGAAIPGMTKDMVT
VLSTDGSILASHEDSLTAAPGNIVTLEKTLAKDIEERVGMTLVPFLGLEN
FRISVTAKLNTDRKQTNETIYDPESRVERSVRTVKELGEAQNNNSQSAVT
VDQNIPTETTPTAAGDQSTEKNDKREELTNYEINSKSVATTSEGYSIENL
SIAVIINKVQLSKGLGGSPTPEQMTAKMTEIQSLISSASG
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mRNA from alignment at P-wetherbeei_contig17296:259..1440+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17296.1.1 ID=mRNA_P-wetherbeei_contig17296.1.1|Name=mRNA_P-wetherbeei_contig17296.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1182bp|location=Sequence derived from alignment at P-wetherbeei_contig17296:259..1440+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGATTTTTTGATGCGTTTGCAATTGGGGCTTGCCAGTCTCGGATTGAA GCGGCTTATGACCCTTGGCATCGCTGGCATTGCGGTTTTTACCCTGGTTG CGACCAGCAGCTATTATCTCAGCTTGCCGCAACGCGAAGTCATTTACTCC GGCCTCGACTTGCAGGACGTAAGCCAGATTGGCGCCGTTCTGGAGGAATC AGGCGTTCCATTTGACGTTAATCCCGAAGGAACAGCCGTACTGGTTGACT ATGGCAATACGGCCAGGGCCCGCATGCTGCTGGCTGAAAAGGGCCTGCCG AAGGGTGACAAGTCCGGTTACGAGCTGTTCGACAATCTCGGTTCCATGGG CCTGACATCCTTCATGCAGCAAATCACCAAGGTGAGGGCGCTTGAAGGCG AACTTGCCCGCACCATTCAGCTGATGAAAGGCATAAAGGCCGCACGCGTT CACATTGTCCTGCCCCAGGAGGGAACCTTCCGCAGCATAAAGGAACCGCC TTCAGCTTCAGTCATTATCCGCACCGAAATGAGTGATGGAAAGCTTTATG CCGCAGCCATTCAACAGCTCGTAGGTGCTGCCATTCCCGGCATGACGAAG GATATGGTGACGGTTCTCAGCACGGATGGTTCCATCCTTGCCTCCCATGA GGATTCCCTTACTGCGGCCCCGGGAAACATCGTGACGCTCGAGAAAACCC TGGCAAAGGATATCGAGGAGCGGGTCGGCATGACGCTTGTGCCGTTCCTG GGCCTTGAAAACTTCCGGATCAGCGTCACTGCCAAACTGAATACGGACCG CAAGCAGACAAATGAGACCATATACGACCCGGAGTCCCGGGTTGAACGGT CGGTGCGAACCGTGAAGGAACTGGGCGAAGCCCAAAACAACAACAGCCAG TCCGCCGTCACCGTTGATCAAAACATTCCGACTGAAACCACGCCAACCGC AGCCGGTGATCAATCCACCGAAAAGAATGACAAACGCGAAGAGTTGACCA ACTACGAAATAAACTCGAAGTCCGTGGCGACCACAAGCGAAGGCTACAGC ATCGAGAACCTTTCGATTGCGGTCATCATTAACAAGGTTCAGCTTTCAAA GGGGCTTGGCGGCAGTCCCACACCCGAACAGATGACAGCCAAAATGACCG AGATTCAGTCTCTGATATCGTCGGCAAGTGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17296:259..1440+

>mRNA_P-wetherbeei_contig17296.1.1 ID=mRNA_P-wetherbeei_contig17296.1.1|Name=mRNA_P-wetherbeei_contig17296.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1170bp|location=Sequence derived from alignment at P-wetherbeei_contig17296:259..1440+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGTTTGCAATTGGGGCTTGCCAGTCTCGGATTGAAGCGGCTTATGAC
CCTTGGCATCGCTGGCATTGCGGTTTTTACCCTGGTTGCGACCAGCAGCT
ATTATCTCAGCTTGCCGCAACGCGAAGTCATTTACTCCGGCCTCGACTTG
CAGGACGTAAGCCAGATTGGCGCCGTTCTGGAGGAATCAGGCGTTCCATT
TGACGTTAATCCCGAAGGAACAGCCGTACTGGTTGACTATGGCAATACGG
CCAGGGCCCGCATGCTGCTGGCTGAAAAGGGCCTGCCGAAGGGTGACAAG
TCCGGTTACGAGCTGTTCGACAATCTCGGTTCCATGGGCCTGACATCCTT
CATGCAGCAAATCACCAAGGTGAGGGCGCTTGAAGGCGAACTTGCCCGCA
CCATTCAGCTGATGAAAGGCATAAAGGCCGCACGCGTTCACATTGTCCTG
CCCCAGGAGGGAACCTTCCGCAGCATAAAGGAACCGCCTTCAGCTTCAGT
CATTATCCGCACCGAAATGAGTGATGGAAAGCTTTATGCCGCAGCCATTC
AACAGCTCGTAGGTGCTGCCATTCCCGGCATGACGAAGGATATGGTGACG
GTTCTCAGCACGGATGGTTCCATCCTTGCCTCCCATGAGGATTCCCTTAC
TGCGGCCCCGGGAAACATCGTGACGCTCGAGAAAACCCTGGCAAAGGATA
TCGAGGAGCGGGTCGGCATGACGCTTGTGCCGTTCCTGGGCCTTGAAAAC
TTCCGGATCAGCGTCACTGCCAAACTGAATACGGACCGCAAGCAGACAAA
TGAGACCATATACGACCCGGAGTCCCGGGTTGAACGGTCGGTGCGAACCG
TGAAGGAACTGGGCGAAGCCCAAAACAACAACAGCCAGTCCGCCGTCACC
GTTGATCAAAACATTCCGACTGAAACCACGCCAACCGCAGCCGGTGATCA
ATCCACCGAAAAGAATGACAAACGCGAAGAGTTGACCAACTACGAAATAA
ACTCGAAGTCCGTGGCGACCACAAGCGAAGGCTACAGCATCGAGAACCTT
TCGATTGCGGTCATCATTAACAAGGTTCAGCTTTCAAAGGGGCTTGGCGG
CAGTCCCACACCCGAACAGATGACAGCCAAAATGACCGAGATTCAGTCTC
TGATATCGTCGGCAAGTGGC
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