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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 2833 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 2829 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186103.2901235-CDS-P-wetherbeei_contig1696:1219..4048 | 1683186103.2901235-CDS-P-wetherbeei_contig1696:1219..4048 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1696 1220..4048 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186103.2992494-UTR-P-wetherbeei_contig1696:4048..4050 | 1683186103.2992494-UTR-P-wetherbeei_contig1696:4048..4050 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1696 4049..4050 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1696.2.1 >prot_P-wetherbeei_contig1696.2.1 ID=prot_P-wetherbeei_contig1696.2.1|Name=mRNA_P-wetherbeei_contig1696.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=943bp
MWKSFGIDLSALNLDALQENDPHLEEERKKEEEKKRNALAAAAARAAPQP
VNTPVVQANSAAPSLVGVRRASQEAPSRKNVTPEPKRKGKGSTAEEGWDW
ADDRNDKAAVGASKGGQDEPRHRGSGQKSSSLPLPTSLKASDAGNDGAAA
TDATGVASTGVVHASSQAPVAAMRTPVSVLQQEPAQSADEASVAPSFASL
FQQVRQEPAADSLRNLGAGWGALFAQKQDIVTMAAASYAAPAVAATATSS
QQRWERQESGASGLHEDGERAPSTVRNGSDIARQLQAPFDVEGGAGIALA
NGSTSGGGGGNGDAGIGDAGAGGAGGAGTERAFGRVLGAELDVPRPQSPA
AVPPRSAGEEQAVGSGDGPPAMPLSPSPCIASVEGAIVPNGDAMTPAMAA
AAAMTAIAVISGAPKTDFAAATAAPSADVALNVPSENALPTMRQTPPESR
AGTGDVGNGEAAAGAAPQDPSARTAVATTAAPSEAGTAVAADAVRGAPRK
GRGVASSHKRGGRASAPAAASVASTPASEAVPVASAAVEAVPAAGAAFAT
VPAAGAAVETAPVSDAGDSAVDEAKAAAAEQERRATREHLAAAEDNLTTA
VRDLGLQQARFSSELDSARAAAAGAEAAVVAAEAWAAAAEDEAGGVRALA
ERLAKESEASTASAEAAAAAAAELVAGGPAKAEAAAAVRAEPSGTDGTSA
DAGDTADGTAELDSLRRDTAALCTELSWKAEAANAAGTAAARSAAGSGNR
RRGRGRREREQAATGVDDAAGLAAGAEAGAGASLVPAPNGAANNAAPDAA
ATGAAGTAAAAAAAKAAEAAAAADAASAAELAAVRSEADATRGELAAAHA
ALEHMRGEVVAAADEAEAYRAEMVAARADAAAAQAGFDEARAGYLQATSR
TADLERELRRVVEAAAAAAAAAAAAAERGEAENRRLREAGEAA back to topmRNA from alignment at P-wetherbeei_contig1696:1220..4050- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig1696.2.1 ID=mRNA_P-wetherbeei_contig1696.2.1|Name=mRNA_P-wetherbeei_contig1696.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2831bp|location=Sequence derived from alignment at P-wetherbeei_contig1696:1220..4050- (Phaeothamnion wetherbeei SAG_119_79)
AGATGTGGAAGAGTTTTGGTATAGACCTTAGTGCTCTCAATCTTGACGCA
CTACAAGAGAATGACCCACACCTGGAAGAAGAGCGCAAGAAAGAGGAGGA
GAAGAAGAGAAATGCTCTTGCAGCAGCAGCTGCGAGAGCGGCGCCGCAAC
CAGTTAATACACCCGTAGTACAGGCTAATTCTGCAGCCCCTTCACTCGTC
GGCGTGCGCCGTGCTTCGCAAGAGGCTCCAAGTCGCAAGAATGTTACCCC
TGAACCTAAAAGAAAGGGAAAAGGCAGCACGGCAGAGGAAGGCTGGGACT
GGGCCGACGATAGAAATGACAAGGCAGCTGTCGGCGCTTCCAAAGGGGGC
CAGGATGAACCGCGACATCGTGGCTCTGGGCAGAAATCTTCCTCTTTACC
ACTTCCAACATCGCTAAAGGCGTCAGACGCTGGAAACGACGGCGCCGCGG
CGACTGATGCAACCGGAGTGGCTTCGACAGGCGTAGTACACGCGTCCTCA
CAGGCGCCGGTAGCGGCCATGCGAACGCCTGTCTCTGTGCTACAGCAAGA
GCCAGCTCAGTCAGCGGACGAGGCATCAGTCGCCCCAAGCTTCGCTTCGC
TCTTCCAGCAGGTGCGGCAAGAACCCGCGGCAGACTCGCTGCGAAACCTC
GGCGCCGGCTGGGGCGCCCTGTTTGCTCAAAAGCAGGACATTGTGACGAT
GGCAGCGGCATCATACGCGGCGCCGGCAGTCGCGGCGACAGCAACATCGT
CACAGCAGCGCTGGGAGCGGCAGGAGTCTGGAGCCAGCGGATTACATGAA
GACGGAGAAAGAGCGCCCTCGACTGTTCGAAATGGCTCAGACATTGCTCG
CCAGCTGCAGGCGCCGTTTGATGTCGAAGGCGGAGCTGGCATTGCTCTCG
CCAACGGCAGCACCAGTGGCGGCGGCGGTGGCAATGGCGACGCCGGTATT
GGCGATGCCGGTGCTGGCGGTGCTGGCGGCGCTGGCACCGAACGGGCCTT
CGGCCGGGTGCTGGGTGCTGAGCTAGATGTGCCGAGGCCACAGAGCCCAG
CAGCAGTGCCTCCAAGATCTGCGGGCGAAGAGCAGGCCGTCGGGAGCGGC
GACGGTCCGCCGGCGATGCCGCTTTCGCCATCGCCGTGTATTGCTTCTGT
GGAAGGTGCCATAGTTCCGAATGGTGATGCGATGACGCCGGCGATGGCGG
CGGCGGCGGCGATGACAGCGATAGCTGTTATATCTGGAGCCCCCAAAACG
GATTTTGCTGCGGCGACGGCCGCACCGTCGGCGGATGTAGCGCTGAATGT
GCCTAGTGAGAACGCTTTGCCAACAATGAGGCAGACGCCACCCGAAAGCA
GGGCTGGAACCGGCGATGTAGGCAACGGGGAAGCAGCAGCGGGCGCAGCT
CCGCAGGATCCGTCGGCGCGGACGGCCGTGGCAACGACGGCGGCACCATC
TGAAGCCGGGACGGCTGTGGCAGCTGACGCTGTCCGAGGGGCGCCGCGGA
AAGGCCGCGGCGTTGCGTCCTCCCACAAACGCGGAGGGCGAGCTTCGGCG
CCGGCAGCAGCCTCTGTTGCTTCGACGCCCGCCAGTGAGGCGGTGCCGGT
GGCGAGCGCTGCCGTTGAGGCAGTGCCGGCGGCAGGCGCCGCCTTTGCGA
CGGTGCCGGCGGCAGGCGCCGCCGTTGAGACGGCGCCGGTGTCAGATGCC
GGCGATTCCGCCGTGGATGAAGCAAAAGCGGCGGCTGCGGAGCAGGAGCG
TCGAGCGACACGGGAACACCTGGCCGCTGCGGAAGACAATCTGACGACGG
CGGTGCGGGATTTGGGGCTGCAACAGGCCCGCTTCTCGTCCGAGCTGGAC
TCGGCGCGGGCGGCAGCAGCTGGCGCCGAGGCGGCAGTTGTCGCTGCTGA
AGCCTGGGCGGCTGCGGCGGAGGACGAGGCCGGGGGGGTGCGAGCGCTGG
CCGAGAGACTCGCCAAAGAGTCGGAGGCGTCGACGGCGTCGGCGGAAGCC
GCGGCCGCTGCGGCGGCAGAGCTGGTAGCGGGGGGGCCGGCAAAGGCAGA
AGCTGCTGCAGCGGTGCGTGCGGAGCCTTCCGGAACCGACGGAACAAGCG
CGGACGCCGGCGACACTGCGGATGGGACGGCCGAGCTTGATTCGCTGCGT
CGGGATACAGCGGCGCTGTGTACAGAGCTGTCTTGGAAAGCGGAGGCTGC
CAATGCCGCTGGAACTGCAGCTGCCCGATCTGCAGCCGGCAGTGGCAACC
GCCGACGCGGTCGGGGGCGTCGGGAGCGGGAGCAGGCGGCCACCGGTGTC
GACGATGCAGCAGGTCTGGCCGCGGGCGCCGAAGCCGGCGCCGGTGCGAG
CCTGGTCCCCGCACCAAACGGGGCAGCTAATAATGCTGCTCCTGACGCCG
CCGCCACCGGCGCTGCCGGTACCGCCGCCGCAGCAGCAGCTGCCAAGGCC
GCGGAAGCCGCGGCCGCCGCAGACGCAGCGAGCGCCGCGGAGCTCGCCGC
TGTGCGCAGCGAAGCCGATGCCACGCGTGGCGAGCTGGCCGCCGCGCACG
CCGCGCTCGAGCACATGCGCGGCGAGGTGGTCGCGGCAGCCGATGAGGCA
GAAGCCTACCGTGCCGAGATGGTGGCGGCGCGGGCAGATGCGGCCGCGGC
GCAGGCCGGCTTTGACGAGGCGCGGGCGGGCTACCTGCAAGCTACTTCGC
GGACGGCTGACCTCGAGCGGGAGCTGCGGCGTGTCGTGGAAGCGGCGGCA
GCGGCGGCTGCGGCAGCGGCGGCCGCCGCCGAGCGTGGCGAGGCGGAGAA
CCGGCGGCTGCGGGAGGCTGGGGAAGCGGCG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig1696:1220..4050- >mRNA_P-wetherbeei_contig1696.2.1 ID=mRNA_P-wetherbeei_contig1696.2.1|Name=mRNA_P-wetherbeei_contig1696.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2829bp|location=Sequence derived from alignment at P-wetherbeei_contig1696:1220..4050- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGAAGAGTTTTGGTATAGACCTTAGTGCTCTCAATCTTGACGCACT
ACAAGAGAATGACCCACACCTGGAAGAAGAGCGCAAGAAAGAGGAGGAGA
AGAAGAGAAATGCTCTTGCAGCAGCAGCTGCGAGAGCGGCGCCGCAACCA
GTTAATACACCCGTAGTACAGGCTAATTCTGCAGCCCCTTCACTCGTCGG
CGTGCGCCGTGCTTCGCAAGAGGCTCCAAGTCGCAAGAATGTTACCCCTG
AACCTAAAAGAAAGGGAAAAGGCAGCACGGCAGAGGAAGGCTGGGACTGG
GCCGACGATAGAAATGACAAGGCAGCTGTCGGCGCTTCCAAAGGGGGCCA
GGATGAACCGCGACATCGTGGCTCTGGGCAGAAATCTTCCTCTTTACCAC
TTCCAACATCGCTAAAGGCGTCAGACGCTGGAAACGACGGCGCCGCGGCG
ACTGATGCAACCGGAGTGGCTTCGACAGGCGTAGTACACGCGTCCTCACA
GGCGCCGGTAGCGGCCATGCGAACGCCTGTCTCTGTGCTACAGCAAGAGC
CAGCTCAGTCAGCGGACGAGGCATCAGTCGCCCCAAGCTTCGCTTCGCTC
TTCCAGCAGGTGCGGCAAGAACCCGCGGCAGACTCGCTGCGAAACCTCGG
CGCCGGCTGGGGCGCCCTGTTTGCTCAAAAGCAGGACATTGTGACGATGG
CAGCGGCATCATACGCGGCGCCGGCAGTCGCGGCGACAGCAACATCGTCA
CAGCAGCGCTGGGAGCGGCAGGAGTCTGGAGCCAGCGGATTACATGAAGA
CGGAGAAAGAGCGCCCTCGACTGTTCGAAATGGCTCAGACATTGCTCGCC
AGCTGCAGGCGCCGTTTGATGTCGAAGGCGGAGCTGGCATTGCTCTCGCC
AACGGCAGCACCAGTGGCGGCGGCGGTGGCAATGGCGACGCCGGTATTGG
CGATGCCGGTGCTGGCGGTGCTGGCGGCGCTGGCACCGAACGGGCCTTCG
GCCGGGTGCTGGGTGCTGAGCTAGATGTGCCGAGGCCACAGAGCCCAGCA
GCAGTGCCTCCAAGATCTGCGGGCGAAGAGCAGGCCGTCGGGAGCGGCGA
CGGTCCGCCGGCGATGCCGCTTTCGCCATCGCCGTGTATTGCTTCTGTGG
AAGGTGCCATAGTTCCGAATGGTGATGCGATGACGCCGGCGATGGCGGCG
GCGGCGGCGATGACAGCGATAGCTGTTATATCTGGAGCCCCCAAAACGGA
TTTTGCTGCGGCGACGGCCGCACCGTCGGCGGATGTAGCGCTGAATGTGC
CTAGTGAGAACGCTTTGCCAACAATGAGGCAGACGCCACCCGAAAGCAGG
GCTGGAACCGGCGATGTAGGCAACGGGGAAGCAGCAGCGGGCGCAGCTCC
GCAGGATCCGTCGGCGCGGACGGCCGTGGCAACGACGGCGGCACCATCTG
AAGCCGGGACGGCTGTGGCAGCTGACGCTGTCCGAGGGGCGCCGCGGAAA
GGCCGCGGCGTTGCGTCCTCCCACAAACGCGGAGGGCGAGCTTCGGCGCC
GGCAGCAGCCTCTGTTGCTTCGACGCCCGCCAGTGAGGCGGTGCCGGTGG
CGAGCGCTGCCGTTGAGGCAGTGCCGGCGGCAGGCGCCGCCTTTGCGACG
GTGCCGGCGGCAGGCGCCGCCGTTGAGACGGCGCCGGTGTCAGATGCCGG
CGATTCCGCCGTGGATGAAGCAAAAGCGGCGGCTGCGGAGCAGGAGCGTC
GAGCGACACGGGAACACCTGGCCGCTGCGGAAGACAATCTGACGACGGCG
GTGCGGGATTTGGGGCTGCAACAGGCCCGCTTCTCGTCCGAGCTGGACTC
GGCGCGGGCGGCAGCAGCTGGCGCCGAGGCGGCAGTTGTCGCTGCTGAAG
CCTGGGCGGCTGCGGCGGAGGACGAGGCCGGGGGGGTGCGAGCGCTGGCC
GAGAGACTCGCCAAAGAGTCGGAGGCGTCGACGGCGTCGGCGGAAGCCGC
GGCCGCTGCGGCGGCAGAGCTGGTAGCGGGGGGGCCGGCAAAGGCAGAAG
CTGCTGCAGCGGTGCGTGCGGAGCCTTCCGGAACCGACGGAACAAGCGCG
GACGCCGGCGACACTGCGGATGGGACGGCCGAGCTTGATTCGCTGCGTCG
GGATACAGCGGCGCTGTGTACAGAGCTGTCTTGGAAAGCGGAGGCTGCCA
ATGCCGCTGGAACTGCAGCTGCCCGATCTGCAGCCGGCAGTGGCAACCGC
CGACGCGGTCGGGGGCGTCGGGAGCGGGAGCAGGCGGCCACCGGTGTCGA
CGATGCAGCAGGTCTGGCCGCGGGCGCCGAAGCCGGCGCCGGTGCGAGCC
TGGTCCCCGCACCAAACGGGGCAGCTAATAATGCTGCTCCTGACGCCGCC
GCCACCGGCGCTGCCGGTACCGCCGCCGCAGCAGCAGCTGCCAAGGCCGC
GGAAGCCGCGGCCGCCGCAGACGCAGCGAGCGCCGCGGAGCTCGCCGCTG
TGCGCAGCGAAGCCGATGCCACGCGTGGCGAGCTGGCCGCCGCGCACGCC
GCGCTCGAGCACATGCGCGGCGAGGTGGTCGCGGCAGCCGATGAGGCAGA
AGCCTACCGTGCCGAGATGGTGGCGGCGCGGGCAGATGCGGCCGCGGCGC
AGGCCGGCTTTGACGAGGCGCGGGCGGGCTACCTGCAAGCTACTTCGCGG
ACGGCTGACCTCGAGCGGGAGCTGCGGCGTGTCGTGGAAGCGGCGGCAGC
GGCGGCTGCGGCAGCGGCGGCCGCCGCCGAGCGTGGCGAGGCGGAGAACC
GGCGGCTGCGGGAGGCTGGGGAAGCGGCG back to top
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