mRNA_P-wetherbeei_contig16928.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16928.1.1 vs. uniprot
Match: D8LHA4_ECTSI (Similar to canalicular multispecific organic anion transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA4_ECTSI) HSP 1 Score: 205 bits (521), Expect = 4.060e-57 Identity = 123/245 (50.20%), Postives = 161/245 (65.71%), Query Frame = 1
Query: 4 AGVFRLLSDVFNMCSPMLVREIILYTRGEATLLSPLFARGGGSGANSLTGGAALAALLFAVVLAQAVALQQFIHGVFMVGGSGAGGA---------------------GRVVNLLAKDASQLREFVVFAHNLWASPLTAVGCTFLLYTVLGPSGLVGVSLIPLLIPLESWVSRVSERHRRRVLAFADARVSLVAESIDAIKTVKLLVLGGHVREKVAALRREELTAIRRALQLSALNQAVMRASP 675
AG FRLL+++ + +PM++RE+IL+ G+AT + N++TGG ALA L ++L QA ALQ FIHGVF+VG A G+ +N AKDAS+LREFVVF HNLWA+PLTA+GCT LL V+G S LVGVSLIP+LIPLE+WV++ S ++R+ VL +DAR+SL+ E ID IKTVKL L + KV LR +EL +IR+AL L+A NQAVMR+SP
Sbjct: 140 AGAFRLLTELAKIAAPMVLREVILFVEGKATAVP-----------NNVTGGLALALYLLLLLLLQACALQHFIHGVFVVGAGVNTVATVAVFDKALRLSRASLEGPRLGQALNFQAKDASKLREFVVFFHNLWAAPLTALGCTLLLLRVVGASALVGVSLIPVLIPLETWVAKRSAKYRKGVLKVSDARISLIGEIIDGIKTVKLNSLDHGFKSKVELLRAKELASIRQALTLNAYNQAVMRSSP 373
BLAST of mRNA_P-wetherbeei_contig16928.1.1 vs. uniprot
Match: A0A6H5JWW8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW8_9PHAE) HSP 1 Score: 197 bits (500), Expect = 2.640e-54 Identity = 126/257 (49.03%), Postives = 158/257 (61.48%), Query Frame = 1
Query: 4 AGVFRLLSDVFNMCSPMLVREIILYTRGEATLLSPLFARGGGSGANSLTGGAALAALLFAVVLAQAVALQQFIHGVFMVGGSGAGGA---------------------GRVVNLLAKDASQLREFVVFAHNLWASPLTAVGCTFLLYTVLGPSGLVGVSLIPLLIPLESWVSRVSERHRRRVLAFADARVSLVAESIDAIKTVKLLVLGGHVREKVAALRREELTAIRRALQLSALNQA------------VMRASP 675
AG FRLL+++ + +PM++RE+IL+ G AT + N++TGG ALA L L QA ALQ FIHGVF+VG A G+V+N AKDAS+LREFVVF HNLWA+PLTA+GCT LL V+G S LVGVSLIPLLIPLE+WV++ S ++R VL +DAR+SL+ E ID IKTVKL L + KV LR +EL +IRRAL L+A NQA VMR+SP
Sbjct: 12 AGGFRLLTELAKIAAPMVLREVILFVGGNATAVP-----------NNITGGLALALFLLXXXLLQACALQHFIHGVFVVGAGVNTVATVAVFDKALRLSSASLEGQRLGQVLNFQAKDASKLREFVVFFHNLWAAPLTALGCTLLLLRVVGASALVGVSLIPLLIPLETWVAKRSAKYREGVLKVSDARISLIGEIIDGIKTVKLNSLDHGFKSKVELLRAKELASIRRALSLNAYNQARARWGVKKSLLAVMRSSP 257
BLAST of mRNA_P-wetherbeei_contig16928.1.1 vs. uniprot
Match: A0A835YQ24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ24_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.020e-49 Identity = 106/246 (43.09%), Postives = 155/246 (63.01%), Query Frame = 1
Query: 4 AGVFRLLSDVFNMCSPMLVREIILYTRGEATLLSPLFARGGGSGANSLT-GGAALAALLFAVVLAQAVALQQFIHGVFMVGGSGAGGA---------------------GRVVNLLAKDASQLREFVVFAHNLWASPLTAVGCTFLLYTVLGPSGLVGVSLIPLLIPLESWVSRVSERHRRRVLAFADARVSLVAESIDAIKTVKLLVLGGHVREKVAALRREELTAIRRALQLSALNQAVMRASP 675
AGVFRL ++ N+ +P+++R++IL+ + GG + T GG LA LLF +VL QA+ LQQFIHGVF+ + G++ NL +KD + +RE +VFAHNLWA+PLTA+GCT LL VLGPS L+GV+L+P+LIP+E+WV++ +++R+ VL AD R++LV+E ++ +KT+KL + +++V LR EL IR+AL L A NQAVMR+SP
Sbjct: 427 AGVFRLATESCNLLTPLVLRQLILFVGHK---------HGGSTWVPDTTAGGCTLAVLLFCMVLVQALTLQQFIHGVFVTAAKASATISSALFSKALKLSRTAVEGPKLGKITNLQSKDLNMVREMIVFAHNLWAAPLTAIGCTLLLLHVLGPSALIGVALVPVLIPVETWVAKKGQKYRKGVLGVADRRINLVSEMVEGMKTIKLNGMEKLFKDRVQQLRDAELGTIRKALLLGAYNQAVMRSSP 663
BLAST of mRNA_P-wetherbeei_contig16928.1.1 vs. uniprot
Match: A0A0G4G778_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G778_VITBC) HSP 1 Score: 160 bits (404), Expect = 2.020e-41 Identity = 100/246 (40.65%), Postives = 148/246 (60.16%), Query Frame = 1
Query: 1 MAGVFRLLSDVFNMCSPMLVREIILYTRGEATLLSPLFARGGGSGANSLTGGAALAALLFAVVLAQAVALQQFIHGVFMV---------------------GGSGAGGAGRVVNLLAKDASQLREFVVFAHNLWASPLTAVGCTFLLYTVLGPSGLVGVSLIPLLIPLESWVSRVSERHRRRVLAFADARVSLVAESIDAIKTVKLLVLGGHVREKVAALRREELTAIRRALQLSALNQAVMRASP 675
+AG+FRL+++V + SP+L+ ++ EA G G G L G L L+F V + Q++ALQQFIHGVFM+ G A G +VNL +KDA++LREF+VF HNLWA+PLT+ +LY ++G LVGV +I LL+P E+WV++ +E++R++VL AD R+SL+ E ++ I+T+K ++KV+ LR +E+T +RRAL L NQ +MRASP
Sbjct: 97 LAGMFRLVAEVCVLLSPVLLHALVEAAGREA---------GDGGG---LFGSIGLCVLMFGVAVVQSLALQQFIHGVFMLAAYVVTIVSGMVFDKALRIRKGTIEAAQLGVLVNLQSKDAARLREFIVFVHNLWAAPLTSTVAIVMLYRLMGSCALVGVLMIALLVPAETWVAKTAEKYRKQVLHVADERLSLLKEVVEGIQTIKFGGCQDVFQQKVSRLRTDEMTNVRRALLLDVNNQVLMRASP 330
BLAST of mRNA_P-wetherbeei_contig16928.1.1 vs. uniprot
Match: A0A7S0EXI0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EXI0_9CRYP) HSP 1 Score: 120 bits (301), Expect = 1.220e-27 Identity = 74/244 (30.33%), Postives = 133/244 (54.51%), Query Frame = 1
Query: 7 GVFRLLSDVFNMCSPMLVREIILYTRGEATLLSPLFARGGGSGANSLTGGAALAALLFAVVLAQAVALQQFIHGVFMVGGSGAG---------------------GAGRVVNLLAKDASQLREFVVFAHNLWASPLTAVGCTFLLYTVLGPSGLVGVSLIPLLIPLESWVSRVSERHRRRVLAFADARVSLVAESIDAIKTVKLLVLGGHVREKVAALRREELTAIRRALQLSALNQAVMRASP 675
G RL S++ +M SP+L+ +++ Y ++ + + + +S T G +A L+ + Q++ LQ +I F G +G++ NL+ KDA++++EF++F HN+W++P TA +L ++LG G+ L +LIPL+S+++R SE+ R L ++D R+ +V +++ I+TVKL V +K+ A+R+ E AIR + L +LN+A+M ASP
Sbjct: 103 GFLRLCSELGSMASPLLLNQMLKYLSDQSNMFAA-------ANHHSFTEGYMIALLMLLAAVFQSLCLQHYIGMCFECGAYARSTVMNLVFGKVLRLQSSSIQDISSGQLTNLMTKDAAKIQEFILFGHNIWSAPFTAAWVIGMLLSILGWPATAGIVLTIVLIPLQSYIARCSEKFRSETLKYSDLRLKIVGTTLEGIRTVKLSAWEKEVEKKLQAIRQSEARAIRNSAVLLSLNRALMDASP 339
BLAST of mRNA_P-wetherbeei_contig16928.1.1 vs. uniprot
Match: L1I502_GUITC (ABC transmembrane type-1 domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I502_GUITC) HSP 1 Score: 115 bits (288), Expect = 4.210e-27 Identity = 75/228 (32.89%), Postives = 129/228 (56.58%), Query Frame = 1
Query: 7 GVFRLLSDVFNMCSPMLVREIILYTRGEATLLSPLFARGGGSGANSLTGGAALAALLFAVVLAQAVALQQFIHGVFMVGGSGAGGAGRVVNL-----LAKDASQLREFVVFAHNLWASPLTAVGCTFLLYTVLGPSGLVGVSLIPLLIPLESWVSRVSERHRRRVLAFADARVSLVAESIDAIKTVKLLVLGGHVREKVAALRREELTAIRRALQLSALNQAVMRASP 675
G RL S++ +M SP+L+ +++ Y ++T+ + +S T G +A L+ + Q++ LQ +I F G A V+NL L +S ++EF++F HN+W++P TA +L ++LG S G+ L +LIPL+S+++R SE+ R L ++D R+ +V +++ I+TVKL V +K+ +R+ E AIR + L +LN+A+M ASP
Sbjct: 103 GFLRLCSELGSMASPLLMNQMLKYLSDQSTVFAAAHH-------HSYTEGYIIAFLMLVAAVFQSLCLQHYIGLCFECG---AFARSTVMNLVFGKVLRLQSSSIQEFILFGHNIWSAPFTASWVIGMLLSILGFSATAGIILTIVLIPLQSYIARCSEKFRSETLKYSDLRLKIVGTTLEGIRTVKLSAWEKEVEKKLHVIRQSEAKAIRNSAVLLSLNRALMDASP 320
BLAST of mRNA_P-wetherbeei_contig16928.1.1 vs. uniprot
Match: A0A7S4URE7_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4URE7_GUITH) HSP 1 Score: 118 bits (296), Expect = 4.730e-27 Identity = 74/244 (30.33%), Postives = 133/244 (54.51%), Query Frame = 1
Query: 7 GVFRLLSDVFNMCSPMLVREIILYTRGEATLLSPLFARGGGSGANSLTGGAALAALLFAVVLAQAVALQQFIHGVFMVGGSGAG---------------------GAGRVVNLLAKDASQLREFVVFAHNLWASPLTAVGCTFLLYTVLGPSGLVGVSLIPLLIPLESWVSRVSERHRRRVLAFADARVSLVAESIDAIKTVKLLVLGGHVREKVAALRREELTAIRRALQLSALNQAVMRASP 675
G RL S++ +M SP+L+ +++ Y ++T+ + +S T G +A L+ + Q++ LQ +I F G +G++ NL+ KD+++++EF++F HN+W++P TA +L ++LG S G+ L +LIPL+S+++R SE+ R L ++D R+ +V +++ I+TVKL V +K+ +R+ E AIR + L +LN+A+M ASP
Sbjct: 103 GFLRLCSELGSMASPLLMNQMLKYLSDQSTVFAAAHH-------HSYTEGYIIAFLMLVAAVFQSLCLQHYIGLCFECGAFARSTVMNLVFGKVLRLQSSSIQDISSGQLTNLMTKDSAKIQEFILFGHNIWSAPFTASWVIGMLLSILGFSATAGIILTIVLIPLQSYIARCSEKFRSETLKYSDLRLKIVGTTLEGIRTVKLSAWEKEVEKKLHVIRQSEAKAIRNSAVLLSLNRALMDASP 339
BLAST of mRNA_P-wetherbeei_contig16928.1.1 vs. uniprot
Match: A0A673CLX7_9TELE (ABC-type glutathione-S-conjugate transporter n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673CLX7_9TELE) HSP 1 Score: 90.9 bits (224), Expect = 2.210e-17 Identity = 67/244 (27.46%), Postives = 115/244 (47.13%), Query Frame = 1
Query: 7 GVFRLLSDVFNMCSPMLVREIILYTRGEATLLSPLFARGGGSGANSLTGGAALAALLFAVVLAQAVALQQFIHGVFMVG---------------------GSGAGGAGRVVNLLAKDASQLREFVVFAHNLWASPLTAVGCTFLLYTVLGPSGLVGVSLIPLLIPLESWVSRVSERHRRRVLAFADARVSLVAESIDAIKTVKLLVLGGHVREKVAALRREELTAIRRALQLSALNQAVMRASP 675
++LL DV +P L+R +I +T+ + +P + G ALA L+F Q + L Q F+ G A G VVNL++ DA + + F + LW++PL + + L+ LGPS L GV+++ LLIP + ++ + ++ + + DAR+ L+ E ++ IK +KL +EKV A+R++EL +R+ L AL+ ++P
Sbjct: 309 SAYKLLQDVITFVNPQLLRMLISFTKEQN---APAW------------WGYALAFLMFFTAFLQTLILHQHFQYCFVTGMNVRTAVIGAIYRKALVITNAAKRASTVGEVVNLMSVDAQRFMDLTTFLNMLWSAPLQIMLALYFLWQNLGPSVLAGVAVMILLIPFNAVIAMKTRAYQVEQMQYKDARIKLMNEILNGIKVLKLYAWENSFKEKVLAIRQQELNVLRKTAYLGALSTMAWTSAP 537
BLAST of mRNA_P-wetherbeei_contig16928.1.1 vs. uniprot
Match: A0A673CJC1_9TELE (ABC-type glutathione-S-conjugate transporter n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673CJC1_9TELE) HSP 1 Score: 90.9 bits (224), Expect = 2.210e-17 Identity = 67/244 (27.46%), Postives = 115/244 (47.13%), Query Frame = 1
Query: 7 GVFRLLSDVFNMCSPMLVREIILYTRGEATLLSPLFARGGGSGANSLTGGAALAALLFAVVLAQAVALQQFIHGVFMVG---------------------GSGAGGAGRVVNLLAKDASQLREFVVFAHNLWASPLTAVGCTFLLYTVLGPSGLVGVSLIPLLIPLESWVSRVSERHRRRVLAFADARVSLVAESIDAIKTVKLLVLGGHVREKVAALRREELTAIRRALQLSALNQAVMRASP 675
++LL DV +P L+R +I +T+ + +P + G ALA L+F Q + L Q F+ G A G VVNL++ DA + + F + LW++PL + + L+ LGPS L GV+++ LLIP + ++ + ++ + + DAR+ L+ E ++ IK +KL +EKV A+R++EL +R+ L AL+ ++P
Sbjct: 290 SAYKLLQDVITFVNPQLLRMLISFTKEQN---APAW------------WGYALAFLMFFTAFLQTLILHQHFQYCFVTGMNVRTAVIGAIYRKALVITNAAKRASTVGEVVNLMSVDAQRFMDLTTFLNMLWSAPLQIMLALYFLWQNLGPSVLAGVAVMILLIPFNAVIAMKTRAYQVEQMQYKDARIKLMNEILNGIKVLKLYAWENSFKEKVLAIRQQELNVLRKTAYLGALSTMAWTSAP 518
BLAST of mRNA_P-wetherbeei_contig16928.1.1 vs. uniprot
Match: A0A673CNG5_9TELE (ABC-type glutathione-S-conjugate transporter n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673CNG5_9TELE) HSP 1 Score: 90.9 bits (224), Expect = 2.210e-17 Identity = 67/244 (27.46%), Postives = 115/244 (47.13%), Query Frame = 1
Query: 7 GVFRLLSDVFNMCSPMLVREIILYTRGEATLLSPLFARGGGSGANSLTGGAALAALLFAVVLAQAVALQQFIHGVFMVG---------------------GSGAGGAGRVVNLLAKDASQLREFVVFAHNLWASPLTAVGCTFLLYTVLGPSGLVGVSLIPLLIPLESWVSRVSERHRRRVLAFADARVSLVAESIDAIKTVKLLVLGGHVREKVAALRREELTAIRRALQLSALNQAVMRASP 675
++LL DV +P L+R +I +T+ + +P + G ALA L+F Q + L Q F+ G A G VVNL++ DA + + F + LW++PL + + L+ LGPS L GV+++ LLIP + ++ + ++ + + DAR+ L+ E ++ IK +KL +EKV A+R++EL +R+ L AL+ ++P
Sbjct: 326 SAYKLLQDVITFVNPQLLRMLISFTKEQN---APAW------------WGYALAFLMFFTAFLQTLILHQHFQYCFVTGMNVRTAVIGAIYRKALVITNAAKRASTVGEVVNLMSVDAQRFMDLTTFLNMLWSAPLQIMLALYFLWQNLGPSVLAGVAVMILLIPFNAVIAMKTRAYQVEQMQYKDARIKLMNEILNGIKVLKLYAWENSFKEKVLAIRQQELNVLRKTAYLGALSTMAWTSAP 554 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16928.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16928.1.1 >prot_P-wetherbeei_contig16928.1.1 ID=prot_P-wetherbeei_contig16928.1.1|Name=mRNA_P-wetherbeei_contig16928.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=225bp MAGVFRLLSDVFNMCSPMLVREIILYTRGEATLLSPLFARGGGSGANSLTback to top mRNA from alignment at P-wetherbeei_contig16928:160..1474+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16928.1.1 ID=mRNA_P-wetherbeei_contig16928.1.1|Name=mRNA_P-wetherbeei_contig16928.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1315bp|location=Sequence derived from alignment at P-wetherbeei_contig16928:160..1474+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16928:160..1474+ >mRNA_P-wetherbeei_contig16928.1.1 ID=mRNA_P-wetherbeei_contig16928.1.1|Name=mRNA_P-wetherbeei_contig16928.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=675bp|location=Sequence derived from alignment at P-wetherbeei_contig16928:160..1474+ (Phaeothamnion wetherbeei SAG_119_79)back to top |