mRNA_P-wetherbeei_contig16898.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16898.1.1
Unique NamemRNA_P-wetherbeei_contig16898.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig16898.1.1 vs. uniprot
Match: A0A7Z9U9W2_9BACT (Adenosine deaminase family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9U9W2_9BACT)

HSP 1 Score: 79.7 bits (195), Expect = 2.540e-17
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 1 
Query:    1 EVEIAVEAFGMDLHQLRQTLIYGFKRSFFHGPYTERRTYVRGIINYYDK 147
            E+E+AV+AF MDL  LR T+IYGFKRSFF G YTERRTYVR II+YYDK
Sbjct:  122 EIELAVKAFNMDLKDLRNTIIYGFKRSFFPGAYTERRTYVRQIIDYYDK 170
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BLAST of mRNA_P-wetherbeei_contig16898.1.1 vs. uniprot
Match: A0A7X8XMH0_9BURK (Adenosine deaminase family protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XMH0_9BURK)

HSP 1 Score: 76.3 bits (186), Expect = 5.300e-15
Identity = 32/50 (64.00%), Postives = 43/50 (86.00%), Query Frame = 1 
Query:    1 EVEIAVEAFGMDLHQLRQTLIYGFKRSFFHGPYTERRTYVRGIINYYDKL 150
            E+++A+EAF MDL QLR T++YGFKRSFF GPY ERR +VR +I+YYD++
Sbjct:  346 ELQLAIEAFEMDLKQLRNTIVYGFKRSFFPGPYNERRRFVRQVIDYYDRV 395
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BLAST of mRNA_P-wetherbeei_contig16898.1.1 vs. uniprot
Match: A0A355TT79_9BACT (Adenosine deaminase family protein n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TT79_9BACT)

HSP 1 Score: 73.6 bits (179), Expect = 4.860e-14
Identity = 31/50 (62.00%), Postives = 40/50 (80.00%), Query Frame = 1 
Query:    1 EVEIAVEAFGMDLHQLRQTLIYGFKRSFFHGPYTERRTYVRGIINYYDKL 150
            EVE+A++ F +   QLR T++YGFKRSFF GPYTERR YVR ++NYYD +
Sbjct:  347 EVELALKTFDLTPRQLRDTIVYGFKRSFFFGPYTERRKYVRQVLNYYDSI 396
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BLAST of mRNA_P-wetherbeei_contig16898.1.1 vs. uniprot
Match: A0A7C5KFV8_9BACT (Adenosine deaminase family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5KFV8_9BACT)

HSP 1 Score: 70.5 bits (171), Expect = 6.250e-13
Identity = 29/50 (58.00%), Postives = 42/50 (84.00%), Query Frame = 1 
Query:    1 EVEIAVEAFGMDLHQLRQTLIYGFKRSFFHGPYTERRTYVRGIINYYDKL 150
            E+  AV+AFG+D+ +L+  L+YGFKRSFF GPYTE+R YVR +I+Y+D++
Sbjct:  355 EISKAVKAFGIDVRRLKNLLVYGFKRSFFPGPYTEKRAYVRQVIDYFDQV 404
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BLAST of mRNA_P-wetherbeei_contig16898.1.1 vs. uniprot
Match: A0A2E2NSG9_9DELT (Adenosine deaminase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E2NSG9_9DELT)

HSP 1 Score: 70.1 bits (170), Expect = 8.270e-13
Identity = 31/50 (62.00%), Postives = 41/50 (82.00%), Query Frame = 1 
Query:    1 EVEIAVEAFGMDLHQLRQTLIYGFKRSFFHGPYTERRTYVRGIINYYDKL 150
            EV +AV+AF MD+ QLR T+IYGFKRSFF G Y E+R YVR +I++YD++
Sbjct:  346 EVRLAVDAFEMDMKQLRNTIIYGFKRSFFPGRYQEKRDYVRKVIDHYDRV 395
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BLAST of mRNA_P-wetherbeei_contig16898.1.1 vs. uniprot
Match: A0A7V3SQ32_9DELT (Adenosine deaminase family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V3SQ32_9DELT)

HSP 1 Score: 68.2 bits (165), Expect = 4.070e-12
Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 1 
Query:    1 EVEIAVEAFGMDLHQLRQTLIYGFKRSFFHGPYTERRTYVRGIINYYDKL 150
            E+EIAV  FG+DL +L+  ++YGFKRSFF   YTE+R YVR +IN+Y+ L
Sbjct:  357 ELEIAVNTFGLDLKRLKDIIVYGFKRSFFPQKYTEKRKYVRSVINFYESL 406
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BLAST of mRNA_P-wetherbeei_contig16898.1.1 vs. uniprot
Match: H9UIC2_SPIAZ (Adenosine deaminase n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) TaxID=889378 RepID=H9UIC2_SPIAZ)

HSP 1 Score: 67.8 bits (164), Expect = 5.510e-12
Identity = 26/50 (52.00%), Postives = 39/50 (78.00%), Query Frame = 1 
Query:    1 EVEIAVEAFGMDLHQLRQTLIYGFKRSFFHGPYTERRTYVRGIINYYDKL 150
            E+++A++ F  D H LR  ++YGFKRSFF+ PYTE+R YVR +I+YY ++
Sbjct:  346 ELQLALDTFDFDAHTLRNCIVYGFKRSFFYHPYTEKRRYVRSVIDYYQRI 395
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BLAST of mRNA_P-wetherbeei_contig16898.1.1 vs. uniprot
Match: A0A7C5IAZ1_9DELT (Adenosine deaminase family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C5IAZ1_9DELT)

HSP 1 Score: 63.9 bits (154), Expect = 1.090e-10
Identity = 27/50 (54.00%), Postives = 40/50 (80.00%), Query Frame = 1 
Query:    1 EVEIAVEAFGMDLHQLRQTLIYGFKRSFFHGPYTERRTYVRGIINYYDKL 150
            EV +A+E FG+   +LRQ +IYGFKRSF+ G YT++R+YVR II++Y ++
Sbjct:  251 EVTLAIEHFGLSSRELRQIIIYGFKRSFYPGSYTQKRSYVRRIIDFYTEV 300
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BLAST of mRNA_P-wetherbeei_contig16898.1.1 vs. uniprot
Match: A0A661WYD3_9BACT (Adenosine deaminase family protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A661WYD3_9BACT)

HSP 1 Score: 63.5 bits (153), Expect = 1.750e-10
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 1 
Query:    1 EVEIAVEAFGMDLHQLRQTLIYGFKRSFFHGPYTERRTYVRGIINYYDKL 150
            E+E+AV  F     +L+ ++IYGFKRSFF G Y E+R YVR IINYY+KL
Sbjct:  352 EIELAVATFHFTETELKNSIIYGFKRSFFPGTYKEKRIYVRKIINYYEKL 401
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BLAST of mRNA_P-wetherbeei_contig16898.1.1 vs. uniprot
Match: A0A1F9HTE4_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_46_8 TaxID=1797879 RepID=A0A1F9HTE4_9DELT)

HSP 1 Score: 59.3 bits (142), Expect = 2.170e-10
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 1 
Query:    1 EVEIAVEAFGMDLHQLRQTLIYGFKRSFFHGPYTERRTYVRGIINYYDKL 150
            E+E AVE+F +   QL+  ++YGFKRSFF   Y  +R YVR +I+YY+KL
Sbjct:   25 EIEKAVESFSISPSQLKDIILYGFKRSFFFHSYASKREYVRQVIDYYEKL 74
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16898.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9U9W2_9BACT2.540e-1775.51Adenosine deaminase family protein n=1 Tax=Phycisp... [more]
A0A7X8XMH0_9BURK5.300e-1564.00Adenosine deaminase family protein n=1 Tax=Burkhol... [more]
A0A355TT79_9BACT4.860e-1462.00Adenosine deaminase family protein n=1 Tax=bacteri... [more]
A0A7C5KFV8_9BACT6.250e-1358.00Adenosine deaminase family protein n=1 Tax=Plancto... [more]
A0A2E2NSG9_9DELT8.270e-1362.00Adenosine deaminase n=1 Tax=Deltaproteobacteria ba... [more]
A0A7V3SQ32_9DELT4.070e-1258.00Adenosine deaminase family protein n=1 Tax=Deltapr... [more]
H9UIC2_SPIAZ5.510e-1252.00Adenosine deaminase n=1 Tax=Spirochaeta africana (... [more]
A0A7C5IAZ1_9DELT1.090e-1054.00Adenosine deaminase family protein n=1 Tax=Deltapr... [more]
A0A661WYD3_9BACT1.750e-1058.00Adenosine deaminase family protein n=1 Tax=Chlamyd... [more]
A0A1F9HTE4_9DELT2.170e-1052.00Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16898contigP-wetherbeei_contig16898:1322..1471 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog889378.Spiaf_1186
Preferred nameadd
PFAMsA_deaminase
Model size150
Max annot lvl2|Bacteria
KEGG rclassRC00477
KEGG koko:K01488
KEGG ReactionR01560,R02556
KEGG Pathwayko00230,ko01100,ko05340,map00230,map01100,map05340
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue2.27e-10
EggNOG OGsCOG1816@1|root,COG1816@2|Bacteria
EC3.5.4.4
Descriptiondeaminase activity
Cds size120
COG categoryF
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186101.3050709-CDS-P-wetherbeei_contig16898:1321..14411683186101.3050709-CDS-P-wetherbeei_contig16898:1321..1441Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16898 1322..1441 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186101.316376-UTR-P-wetherbeei_contig16898:1441..14711683186101.316376-UTR-P-wetherbeei_contig16898:1441..1471Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig16898 1442..1471 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16898.1.1prot_P-wetherbeei_contig16898.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16898 1322..1441 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16898.1.1

>prot_P-wetherbeei_contig16898.1.1 ID=prot_P-wetherbeei_contig16898.1.1|Name=mRNA_P-wetherbeei_contig16898.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=40bp
MDLHQLRQTLIYGFKRSFFHGPYTERRTYVRGIINYYDKL
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mRNA from alignment at P-wetherbeei_contig16898:1322..1471-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16898.1.1 ID=mRNA_P-wetherbeei_contig16898.1.1|Name=mRNA_P-wetherbeei_contig16898.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=150bp|location=Sequence derived from alignment at P-wetherbeei_contig16898:1322..1471- (Phaeothamnion wetherbeei SAG_119_79)
GAAGTCGAGATCGCTGTCGAGGCCTTCGGGATGGACCTGCATCAACTACG
CCAGACGCTCATTTATGGGTTCAAGCGCAGTTTTTTCCACGGCCCCTACA
CCGAGCGCCGCACCTACGTGCGCGGCATCATCAATTACTATGACAAGCTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16898:1322..1471-

>mRNA_P-wetherbeei_contig16898.1.1 ID=mRNA_P-wetherbeei_contig16898.1.1|Name=mRNA_P-wetherbeei_contig16898.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=120bp|location=Sequence derived from alignment at P-wetherbeei_contig16898:1322..1471- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACCTGCATCAACTACGCCAGACGCTCATTTATGGGTTCAAGCGCAG
TTTTTTCCACGGCCCCTACACCGAGCGCCGCACCTACGTGCGCGGCATCA
TCAATTACTATGACAAGCTC
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