mRNA_P-wetherbeei_contig16803.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16803.2.1
Unique NamemRNA_P-wetherbeei_contig16803.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig16803.2.1 vs. uniprot
Match: A0A6H5KHS4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHS4_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 3.060e-46
Identity = 76/109 (69.72%), Postives = 94/109 (86.24%), Query Frame = 1 
Query:    1 CVQVAGYEKRERIGSGAYGTVYKALEIRTQTVVALKRVILHNEQQDGFPLTSLREIQLLKRISHPNCVALLDVVVGRKRDSVYLVFEYCDHDLAALTEAIPKPFSESEI 327
            C  V+ YE+  RIG GAYGTVY+A++ +T ++VALK+VILHNE+QDGFPLTSLREIQLLKRISHP+CV LLDV VGR+R+ V+LVFEYC+HDLA L ++  KPFSES+I
Sbjct:   24 CRPVSSYERLNRIGEGAYGTVYRAVDKQTNSIVALKKVILHNEKQDGFPLTSLREIQLLKRISHPSCVRLLDVAVGRRREMVFLVFEYCEHDLAGLLDSTKKPFSESDI 132
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BLAST of mRNA_P-wetherbeei_contig16803.2.1 vs. uniprot
Match: A0A836CI29_9STRA (Serine/threonine kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI29_9STRA)

HSP 1 Score: 158 bits (399), Expect = 7.850e-45
Identity = 76/109 (69.72%), Postives = 89/109 (81.65%), Query Frame = 1 
Query:    1 CVQVAGYEKRERIGSGAYGTVYKALEIRTQTVVALKRVILHNEQQDGFPLTSLREIQLLKRISHPNCVALLDVVVGRKRDSVYLVFEYCDHDLAALTEAIPKPFSESEI 327
            C  V+ YEK  RIG GAYGTVY+A++  T+  VALKRVILHNE+QDGFPLTSLRE+ LLKRI+H NCVALLDV VGR RD V+LVFEYC+HDLA L E + +PFS SE+
Sbjct:   36 CRPVSTYEKLGRIGQGAYGTVYEAIDKETKRPVALKRVILHNEKQDGFPLTSLREVALLKRIAHSNCVALLDVAVGRNRDGVFLVFEYCEHDLAHLLETVRRPFSVSEV 144
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BLAST of mRNA_P-wetherbeei_contig16803.2.1 vs. uniprot
Match: A0A7S2R4R4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4R4_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.370e-41
Identity = 72/109 (66.06%), Postives = 88/109 (80.73%), Query Frame = 1 
Query:    1 CVQVAGYEKRERIGSGAYGTVYKALEIRTQTVVALKRVILHNEQQDGFPLTSLREIQLLKRISHPNCVALLDVVVGRKRDSVYLVFEYCDHDLAALTEAIPKPFSESEI 327
            C  V  +EK+ RIG G YGTVY+A++  T   VALK+VILHNEQQ GFP+TS+REI+LLKRISHPNCV L DVVVG  RD+V+LVFEYC+HD+A+L E + K FSE+EI
Sbjct:   29 CRSVRCFEKKNRIGEGTYGTVYRAVDKATGETVALKKVILHNEQQVGFPITSIREIRLLKRISHPNCVRLEDVVVGTGRDAVFLVFEYCEHDMASLMETMGKRFSEAEI 137
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BLAST of mRNA_P-wetherbeei_contig16803.2.1 vs. uniprot
Match: A0A8K1CN65_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CN65_PYTOL)

HSP 1 Score: 147 bits (371), Expect = 6.830e-41
Identity = 72/113 (63.72%), Postives = 86/113 (76.11%), Query Frame = 1 
Query:    1 CVQVAGYEKRERIGSGAYGTVYKALEIRTQTVVALKRVILHNEQQDGFPLTSLREIQLLKRISHPNCVALLDVVVGRKRDSVYLVFEYCDHDLAALTEAIP----KPFSESEI 327
            C  V  +EK  RIG G YGTVY+A + R+Q +VALKRVILHNE  DGFP+T+LREI+LLKR+ HPNCV LLDVVVGRKR SV+LVFEYC+HDLA L  +       PF ES++
Sbjct:   16 CRDVDDFEKLNRIGEGTYGTVYRARDRRSQRIVALKRVILHNESSDGFPITALREIKLLKRLRHPNCVQLLDVVVGRKRSSVFLVFEYCEHDLAVLLRSHSGRRHPPFKESQL 128
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BLAST of mRNA_P-wetherbeei_contig16803.2.1 vs. uniprot
Match: A0A5D6XNC6_9STRA (Protein kinase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNC6_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.400e-40
Identity = 71/112 (63.39%), Postives = 83/112 (74.11%), Query Frame = 1 
Query:    1 CVQVAGYEKRERIGSGAYGTVYKALEIRTQTVVALKRVILHNEQQDGFPLTSLREIQLLKRISHPNCVALLDVVVGRKRDSVYLVFEYCDHDLAALTEAIPK---PFSESEI 327
            C  V  +EK  RIG G YGTVY+A + R   VVALKRV+LHNE  DGFP+T+LREI+LLKR+ HPNCV LLDV VGRKR SV+LVFEYC+HDL+ L     K   PF ESE+
Sbjct:   16 CRDVEQFEKLNRIGEGTYGTVYRARDRRDGRVVALKRVLLHNEASDGFPITALREIKLLKRLRHPNCVRLLDVAVGRKRSSVFLVFEYCEHDLSLLLRHQSKSRNPFKESEL 127
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BLAST of mRNA_P-wetherbeei_contig16803.2.1 vs. uniprot
Match: A0A485LJF1_9STRA (Aste57867_21902 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJF1_9STRA)

HSP 1 Score: 145 bits (365), Expect = 6.650e-40
Identity = 69/108 (63.89%), Postives = 85/108 (78.70%), Query Frame = 1 
Query:    1 CVQVAGYEKRERIGSGAYGTVYKALEIRTQTVVALKRVILHNEQQDGFPLTSLREIQLLKRISHPNCVALLDVVVGRKRDSVYLVFEYCDHDLAALTEAIPKPFSESE 324
            C  V  +EK  RIG G YGTVY+A + ++  +VALKRVILHNE+QDGFP+T++REI+LLKR+   NCV L DVVVGRKR  V+LVFEYC+HDL+AL   I +PFSESE
Sbjct:   20 CRDVDEFEKLNRIGEGTYGTVYRARDKKSGEIVALKRVILHNEKQDGFPITAIREIKLLKRLHQENCVQLKDVVVGRKRSGVFLVFEYCEHDLSALMSNIHRPFSESE 127
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BLAST of mRNA_P-wetherbeei_contig16803.2.1 vs. uniprot
Match: A0A7S2C5K6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C5K6_9STRA)

HSP 1 Score: 143 bits (360), Expect = 5.190e-39
Identity = 64/109 (58.72%), Postives = 88/109 (80.73%), Query Frame = 1 
Query:    1 CVQVAGYEKRERIGSGAYGTVYKALEIRTQTVVALKRVILHNEQQDGFPLTSLREIQLLKRISHPNCVALLDVVVGRKRDSVYLVFEYCDHDLAALTEAIPKPFSESEI 327
            C  V+ +E++ RIG G YGTVY+A++  T  VVALK+VILHNE+Q GFP+TSLRE++LLKR++HPNCV L +V VG+ RD+V+LV EYC+HD+A+L + +   FSESE+
Sbjct:   23 CRPVSSFERKNRIGEGTYGTVYRAVDKHTSEVVALKKVILHNEKQVGFPITSLREVRLLKRLNHPNCVLLREVAVGKNRDAVFLVMEYCEHDMASLIDNMCTRFSESEV 131
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BLAST of mRNA_P-wetherbeei_contig16803.2.1 vs. uniprot
Match: A0A067CMD0_SAPPC (CMGC/CDK protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMD0_SAPPC)

HSP 1 Score: 142 bits (358), Expect = 5.800e-39
Identity = 68/108 (62.96%), Postives = 83/108 (76.85%), Query Frame = 1 
Query:    1 CVQVAGYEKRERIGSGAYGTVYKALEIRTQTVVALKRVILHNEQQDGFPLTSLREIQLLKRISHPNCVALLDVVVGRKRDSVYLVFEYCDHDLAALTEAIPKPFSESE 324
            C  V  +EK  RIG G YGTVY+A +  T  +VALKRVILHNE+QDGFP+T++REI+LLKR+   NCV L DVVVGRKR  V+LVFEYC+HDL+AL   +  PF+ESE
Sbjct:   13 CRDVDEFEKLNRIGEGTYGTVYRARDRATGEIVALKRVILHNEKQDGFPITAIREIKLLKRLRQENCVQLKDVVVGRKRSGVFLVFEYCEHDLSALLTNVRHPFTESE 120
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BLAST of mRNA_P-wetherbeei_contig16803.2.1 vs. uniprot
Match: K3WPD7_GLOUD (Protein kinase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPD7_GLOUD)

HSP 1 Score: 142 bits (358), Expect = 6.040e-39
Identity = 69/112 (61.61%), Postives = 85/112 (75.89%), Query Frame = 1 
Query:    1 CVQVAGYEKRERIGSGAYGTVYKALEIRTQTVVALKRVILHNEQQDGFPLTSLREIQLLKRISHPNCVALLDVVVGRKRDSVYLVFEYCDHDLAALTE---AIPKPFSESEI 327
            C  V  +EK  RIG G YGTVY+A + +++ +VALKRVILHNE  +GFP+T+LREI+LLKR+ HPNCV LLDV VGRKR SV+LVFEYC+HDL+ L      +  PF ESEI
Sbjct:   23 CRDVDEFEKLNRIGEGTYGTVYRARDRQSKRIVALKRVILHNEASEGFPITALREIKLLKRLRHPNCVQLLDVAVGRKRSSVFLVFEYCEHDLSLLIRHHLGMRNPFKESEI 134
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BLAST of mRNA_P-wetherbeei_contig16803.2.1 vs. uniprot
Match: A0A6G0WSG0_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSG0_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.080e-38
Identity = 67/108 (62.04%), Postives = 84/108 (77.78%), Query Frame = 1 
Query:    1 CVQVAGYEKRERIGSGAYGTVYKALEIRTQTVVALKRVILHNEQQDGFPLTSLREIQLLKRISHPNCVALLDVVVGRKRDSVYLVFEYCDHDLAALTEAIPKPFSESE 324
            C  V  +EK  RIG G YGTVY+A + ++  +VALKRVILHNE+QDGFP+T++REI+LLKR+   NCV L DVVVGRKR  V+LVFEYC+HDL+AL     +PFS+SE
Sbjct:   17 CRDVDEFEKLNRIGEGTYGTVYRARDKKSGEIVALKRVILHNEKQDGFPITAIREIKLLKRLQQENCVQLKDVVVGRKRSGVFLVFEYCEHDLSALMNNNHRPFSQSE 124
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16803.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHS4_9PHAE3.060e-4669.72Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A836CI29_9STRA7.850e-4569.72Serine/threonine kinase n=1 Tax=Tribonema minus Ta... [more]
A0A7S2R4R4_9STRA2.370e-4166.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8K1CN65_PYTOL6.830e-4163.72Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XNC6_9STRA4.400e-4063.39Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A485LJF1_9STRA6.650e-4063.89Aste57867_21902 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S2C5K6_9STRA5.190e-3958.72Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A067CMD0_SAPPC5.800e-3962.96CMGC/CDK protein kinase n=2 Tax=Saprolegnia TaxID=... [more]
K3WPD7_GLOUD6.040e-3961.61Protein kinase domain-containing protein n=1 Tax=G... [more]
A0A6G0WSG0_9STRA1.080e-3862.04Protein kinase domain-containing protein n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16803contigP-wetherbeei_contig16803:989..1315 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008604143.1
Preferred nameCDK10
PFAMsPkinase
Model size327
Max annot lvl2759|Eukaryota
KEGG koko:K02449,ko:K08818
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0000278,GO:0000375,GO:0000377,GO:0000398,GO:0001932,GO:0001934,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004693,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005815,GO:0005819,GO:0005856,GO:0005929,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006396,GO:0006397,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007089,GO:0007346,GO:0008150,GO:0008152,GO:0008285,GO:0008380,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010562,GO:0010564,GO:0010604,GO:0010639,GO:0010646,GO:0010647,GO:0015630,GO:0016043,GO:0016070,GO:0016071,GO:0016301,GO:0016310,GO:0016569,GO:0016570,GO:0016572,GO:0016592,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019220,GO:0019222,GO:0019538,GO:0022402,GO:0023051,GO:0023056,GO:0030154,GO:0031323,GO:0031325,GO:0031344,GO:0031345,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032502,GO:0032956,GO:0032970,GO:0032991,GO:0033043,GO:0033554,GO:0034641,GO:0036064,GO:0036211,GO:0042127,GO:0042325,GO:0042327,GO:0042995,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043408,GO:0043410,GO:0043412,GO:0044087,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044446,GO:0044451,GO:0044463,GO:0044464,GO:0044770,GO:0044772,GO:0045787,GO:0045931,GO:0045937,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051276,GO:0051445,GO:0051493,GO:0051716,GO:0051726,GO:0060255,GO:0060491,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0072686,GO:0080090,GO:0090068,GO:0090304,GO:0097472,GO:0120025,GO:0120032,GO:0120033,GO:0120035,GO:0120038,GO:0140096,GO:1900087,GO:1901360,GO:1901564,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902017,GO:1902018,GO:1902115,GO:1902116,GO:1902531,GO:1902533,GO:1902806,GO:1902808,GO:1903047,GO:2000045,GO:2000241
Exons1
Evalue9.52e-40
EggNOG OGsKOG0663@1|root,KOG0663@2759|Eukaryota
EC2.7.11.22
Descriptioncyclin-dependent protein serine/threonine kinase activity
Cds size327
COG categoryT
BRITEko00000,ko01000,ko01001,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186098.3241277-CDS-P-wetherbeei_contig16803:988..13151683186098.3241277-CDS-P-wetherbeei_contig16803:988..1315Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16803 989..1315 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16803.2.1prot_P-wetherbeei_contig16803.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16803 989..1315 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16803.2.1

>prot_P-wetherbeei_contig16803.2.1 ID=prot_P-wetherbeei_contig16803.2.1|Name=mRNA_P-wetherbeei_contig16803.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=109bp
CVQVAGYEKRERIGSGAYGTVYKALEIRTQTVVALKRVILHNEQQDGFPL
TSLREIQLLKRISHPNCVALLDVVVGRKRDSVYLVFEYCDHDLAALTEAI
PKPFSESEI
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mRNA from alignment at P-wetherbeei_contig16803:989..1315-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16803.2.1 ID=mRNA_P-wetherbeei_contig16803.2.1|Name=mRNA_P-wetherbeei_contig16803.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig16803:989..1315- (Phaeothamnion wetherbeei SAG_119_79)
TGTGTTCAGGTGGCAGGGTACGAGAAGCGCGAGCGCATCGGCTCCGGCGC
CTACGGCACGGTCTACAAGGCCCTGGAGATAAGAACGCAGACGGTGGTGG
CCCTGAAGCGCGTCATCCTCCACAACGAGCAGCAGGACGGCTTCCCGCTG
ACGTCGCTCCGGGAGATCCAGCTTTTGAAGCGCATCTCGCACCCCAACTG
TGTCGCGCTGCTCGATGTCGTCGTCGGCCGCAAGCGCGACAGCGTCTACT
TGGTCTTTGAGTATTGCGACCACGATCTGGCGGCGCTGACCGAGGCGATT
CCGAAACCATTTAGCGAGTCGGAGATA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16803:989..1315-

>mRNA_P-wetherbeei_contig16803.2.1 ID=mRNA_P-wetherbeei_contig16803.2.1|Name=mRNA_P-wetherbeei_contig16803.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig16803:989..1315- (Phaeothamnion wetherbeei SAG_119_79)
TGTGTTCAGGTGGCAGGGTACGAGAAGCGCGAGCGCATCGGCTCCGGCGC
CTACGGCACGGTCTACAAGGCCCTGGAGATAAGAACGCAGACGGTGGTGG
CCCTGAAGCGCGTCATCCTCCACAACGAGCAGCAGGACGGCTTCCCGCTG
ACGTCGCTCCGGGAGATCCAGCTTTTGAAGCGCATCTCGCACCCCAACTG
TGTCGCGCTGCTCGATGTCGTCGTCGGCCGCAAGCGCGACAGCGTCTACT
TGGTCTTTGAGTATTGCGACCACGATCTGGCGGCGCTGACCGAGGCGATT
CCGAAACCATTTAGCGAGTCGGAGATA
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