mRNA_P-wetherbeei_contig16728.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16728.1.1 vs. uniprot
Match: A0A2G2PXM8_9RHOB (TetR family transcriptional regulator n=1 Tax=Thalassobium sp. TaxID=2030825 RepID=A0A2G2PXM8_9RHOB) HSP 1 Score: 165 bits (418), Expect = 2.450e-48 Identity = 87/193 (45.08%), Postives = 127/193 (65.80%), Query Frame = 1
Query: 13 RGRPRQFDHAAVLGSALQIFWRQGYAATTIDSLAAAMGLNKPSLYNAYGDKQAIYRQALAAFMAQVEDEVNTALSSSADIRKALQRFYQGAIAVYCAESPALGCFAICTATAEAVAHADIQHDLKAIITRLDALLAARFTTAKAAGQIASHLKPLELARITQAVLHSLAVRSRAGESRATLTQLANQAIALLC 591
RGRPRQFD L +A+Q+FW +G+AA ++D LA AM +N+PSLYNA+G+K+A+YRQAL F+AQ+ + AL S D++ +LQRFY A+ +Y + +LGCF CT+ AEA+ IQ +L+ +I ++DA+L R A++AGQ + A + ++L SLA+R RAGE RATL + + LC
Sbjct: 5 RGRPRQFDRDQALSAAMQLFWEKGFAAVSLDELAGAMNMNRPSLYNAFGNKEAVYRQALQLFVAQISSRLEEALFSGHDLKVSLQRFYAAALDIYLSGERSLGCFVTCTSPAEALLFPAIQEELQDVIVQVDAVLERRLRLAQSAGQWPAERSAGAAAVVLHSLLQSLALRVRAGEERATLEAMVGMVLDTLC 197
BLAST of mRNA_P-wetherbeei_contig16728.1.1 vs. uniprot
Match: UPI00039D15AD (TetR/AcrR family transcriptional regulator n=1 Tax=Gilvimarinus chinensis TaxID=396005 RepID=UPI00039D15AD) HSP 1 Score: 164 bits (416), Expect = 5.540e-48 Identity = 90/194 (46.39%), Postives = 130/194 (67.01%), Query Frame = 1
Query: 13 RGRPRQFDHAAVLGSALQIFWRQGYAATTIDSLAAAMGLNKPSLYNAYGDKQAIYRQALAAFMAQVEDEVNTALSSSADIRKALQRFYQGAIAVYCAESPALGCFAICTATAEAVAHADIQHDLKAIITRLDALLAARFTTAKAAGQIASHLKPLELARITQAVLHSLAVRSRAGESRATLTQLANQAIALLCP 594
RGRP ++D VL A ++FWR+G AAT++D LA+AMG+N+PSLYNA+GDK+A+YR+ +A Q+ +E+ L++ D+ KAL+ FY+ A+AVY + LGCFAICTAT A I+ DL +I R+D + R A A G++ + ELA++ QA+LHSLAVR+RAGES + L ++ A+ L P
Sbjct: 6 RGRPPKYDSQQVLARAGEVFWRKGLAATSLDDLASAMGMNRPSLYNAFGDKEALYRRVMAELDKQIAEELYEVLNAEPDLNKALKAFYRRALAVYQSSGENLGCFAICTATVAAPQCPAIKQDLLELIQRVDQTITRRLQRASAEGELQLLVSEKELAKVFQALLHSLAVRTRAGESPSALKRIYCTAVDALVP 199
BLAST of mRNA_P-wetherbeei_contig16728.1.1 vs. uniprot
Match: A0A5P9NGU2_9GAMM (TetR/AcrR family transcriptional regulator n=1 Tax=Halioglobus maricola TaxID=2601894 RepID=A0A5P9NGU2_9GAMM) HSP 1 Score: 164 bits (414), Expect = 1.080e-47 Identity = 86/193 (44.56%), Postives = 128/193 (66.32%), Query Frame = 1
Query: 10 PRGRPRQFDHAAVLGSALQIFWRQGYAATTIDSLAAAMGLNKPSLYNAYGDKQAIYRQALAAFMAQVEDEVNTALSSSADIRKALQRFYQGAIAVYCAESPALGCFAICTATAEAVAHADIQHDLKAIITRLDALLAARFTTAKAAGQIASHLKPLELARITQAVLHSLAVRSRAGESRATLTQLANQAIALL 588
PRGRPR+FD L A+ +FW +G +AT++D LA AM +N+PS+YNA+G+K+AIYR++L F Q++ E+ + LSS + AL F+ AI VYC+ P LGC ICTA +EA+ H ++ DLK +I RLDA L R A+ G++ +P A++ QA L S+A+R+R+G S+ +L +LA +I L+
Sbjct: 2 PRGRPRKFDEDLALMGAMNLFWAKGLSATSLDDLAIAMSMNRPSIYNAFGNKEAIYRKSLERFCGQLDQELQSTLSSGKSLVGALHAFFDQAIDVYCSSQPPLGCLMICTAPSEAINHPEVGDDLKGLIKRLDAGLTDRLVRAQHEGELPEAAQPKLGAQLLQATLQSIALRARSGHSKTSLRKLARYSINLI 194
BLAST of mRNA_P-wetherbeei_contig16728.1.1 vs. uniprot
Match: A0A2D4S8Z1_9GAMM (TetR family transcriptional regulator n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4S8Z1_9GAMM) HSP 1 Score: 160 bits (405), Expect = 7.940e-46 Identity = 86/193 (44.56%), Postives = 124/193 (64.25%), Query Frame = 1
Query: 10 PRGRPRQFDHAAVLGSALQIFWRQGYAATTIDSLAAAMGLNKPSLYNAYGDKQAIYRQALAAFMAQVEDEVNTALSSSADIRKALQRFYQGAIAVYCAESPALGCFAICTATAEAVAHADIQHDLKAIITRLDALLAARFTTAKAAGQIASHLKPLELARITQAVLHSLAVRSRAGESRATLTQLANQAIALL 588
PRGRPRQ+D L +A+++FW QGYA T++D LA A G+N+PSLYNA+G+K++I+R+A+A F ++ + + L + AD+ +AL+ +Y GA+ VY LGC CTA EA H+DI+ ++ I LD RF A+A GQI P LA + QA+ HSL++R+RAG R TL A Q++ LL
Sbjct: 38 PRGRPRQYDENTALEAAMRLFWAQGYAGTSLDELARATGMNRPSLYNAFGNKKSIFRRAMARFSDRMGEHSLSQLHNHADLAEALKAYYYGALDVYFDAPEPLGCLYFCTAAPEASEHSDIRDEIMGAIRLLDDAFTQRFEQAQAEGQIPEDADPRALAALAQAIQHSLSIRARAGAGRRTLQTFAAQSVNLL 230
BLAST of mRNA_P-wetherbeei_contig16728.1.1 vs. uniprot
Match: A0A346N205_9GAMM (TetR/AcrR family transcriptional regulator n=2 Tax=Solimonas sp. K1W22B-7 TaxID=2303331 RepID=A0A346N205_9GAMM) HSP 1 Score: 159 bits (401), Expect = 1.410e-45 Identity = 86/193 (44.56%), Postives = 120/193 (62.18%), Query Frame = 1
Query: 10 PRGRPRQFDHAAVLGSALQIFWRQGYAATTIDSLAAAMGLNKPSLYNAYGDKQAIYRQALAAFMAQVEDEVNTALSSSADIRKALQRFYQGAIAVYCAESPALGCFAICTATAEAVAHADIQHDLKAIITRLDALLAARFTTAKAAGQIASHLKPLELARITQAVLHSLAVRSRAGESRATLTQLANQAIALL 588
PRGRPR+FD A L +A+++FW G++AT++D L + GLN+PSLYNA+G+K +IYR+A A F ++ + AL I+ AL FY I VY + A GC CTA AEA H +I+ DL +I LD L AR +A+ AGQ+ LA I Q +LHSLAVR+RAG++ A L + A ++A +
Sbjct: 8 PRGRPREFDEDAALEAAMRLFWSNGFSATSLDDLVSVTGLNRPSLYNAFGNKLSIYRRAFARFAEKMRSDAGAALMGGDSIQDALLAFYSQIIRVYMEDPEAPGCLVFCTAPAEASRHPEIRSDLSGLIQGLDGFLEARIESARKAGQLPEGTSSRALASIAQGLLHSLAVRARAGDTEAHLRKFARDSVAAI 200
BLAST of mRNA_P-wetherbeei_contig16728.1.1 vs. uniprot
Match: UPI00166897A0 (TetR/AcrR family transcriptional regulator n=1 Tax=Chelatococcus reniformis TaxID=1494448 RepID=UPI00166897A0) HSP 1 Score: 155 bits (393), Expect = 2.150e-44 Identity = 88/193 (45.60%), Postives = 121/193 (62.69%), Query Frame = 1
Query: 13 RGRPRQFDHAAVLGSALQIFWRQGYAATTIDSLAAAMGLNKPSLYNAYGDKQAIYRQALAAFMAQVEDEVNTALSSSADIRKALQRFYQGAIAVYCAESPALGCFAICTATAEAVAHADIQHDLKAIITRLDALLAARFTTAKAAGQIASHLKPLELARITQAVLHSLAVRSRAGESRATLTQLANQAIALLC 591
RGRPR +D VLG A FW GY AT++D+L+AA LN+PSLY A+GDK A+Y + L + Q + AL+ + +R+ L+R Y A+ +Y SPALGC+ I TAT EAV H +++ L+ + +LD R A+ G+IA+ P LARI A+LH+LAVRSRAG+SRA L + IAL+C
Sbjct: 9 RGRPRAYDPDTVLGEATAAFWSSGYGATSLDNLSAATKLNRPSLYGAFGDKGALYLRTLERYRDQAAVGMGAALAPARPLREGLRRVYGHALDLYFHRSPALGCYMIGTATTEAVQHDEVRTFLRDALRQLDRGFERRLALAREQGEIAATADPASLARIASAILHTLAVRSRAGDSRAELEAIVETGIALIC 201
BLAST of mRNA_P-wetherbeei_contig16728.1.1 vs. uniprot
Match: A0A510IZC6_9GAMM (TetR family transcriptional regulator n=1 Tax=Microbulbifer sp. GL-2 TaxID=2591606 RepID=A0A510IZC6_9GAMM) HSP 1 Score: 154 bits (389), Expect = 5.870e-44 Identity = 80/193 (41.45%), Postives = 124/193 (64.25%), Query Frame = 1
Query: 13 RGRPRQFDHAAVLGSALQIFWRQGYAATTIDSLAAAMGLNKPSLYNAYGDKQAIYRQALAAFMAQVEDEVNTALSSSADIRKALQRFYQGAIAVYCAESPALGCFAICTATAEAVAHADIQHDLKAIITRLDALLAARFTTAKAAGQIASHLKPLELARITQAVLHSLAVRSRAGESRATLTQLANQAIALLC 591
RGRP ++D L ALQ+FWR+G AT++D LA +M +N+PS+YNA+GDK +IYR+A F Q+ +E++ L S +++A+ RFY+ A+ Y + LGCF CTA E++AH +I+ DL +IT++D+ + R AK +G +S A++ A L SLA+R+R+GE+R +L + A+ LLC
Sbjct: 5 RGRPPKYDATEALEGALQVFWRKGLTATSLDDLAESMQMNRPSIYNAFGDKVSIYRKAFTQFTNQLGEELDAILDDSCTLKEAMLRFYEQALITYLDKGEPLGCFITCTAPVESLAHPEIRSDLATLITQVDSRIECRLERAKNSGDWSSSRDAKTTAKLFHATLQSLAIRARSGEARDSLVDFYSSAVELLC 197
BLAST of mRNA_P-wetherbeei_contig16728.1.1 vs. uniprot
Match: A0A1H9KZP1_9GAMM (Transcriptional regulator, TetR family n=1 Tax=Amphritea atlantica TaxID=355243 RepID=A0A1H9KZP1_9GAMM) HSP 1 Score: 153 bits (387), Expect = 1.140e-43 Identity = 79/193 (40.93%), Postives = 125/193 (64.77%), Query Frame = 1
Query: 13 RGRPRQFDHAAVLGSALQIFWRQGYAATTIDSLAAAMGLNKPSLYNAYGDKQAIYRQALAAFMAQVEDEVNTALSSSADIRKALQRFYQGAIAVYCAESPALGCFAICTATAEAVAHADIQHDLKAIITRLDALLAARFTTAKAAGQIASHLKPLELARITQAVLHSLAVRSRAGESRATLTQLANQAIALLC 591
RGRP +DH L SA+Q+FW +G +AT++D LAAAM +N+PS+YNA+G+K +IYR+ A F+A++ ++++ L D+ KA+++FY+ A+ Y + LGCF TA EA AH +I+ DL+ +I R+D+++ R A+ G +A++ A L SLAVR+R GESR +L + + A+ +LC
Sbjct: 4 RGRPPGYDHNEALDSAIQVFWTKGLSATSLDDLAAAMKMNRPSIYNAFGNKTSIYRKTFARFVAELGEQLDRELFGEPDLNKAMKQFYRTALDTYFTGTAPLGCFVTSTAVVEAAAHPEIREDLEVVINRIDSVIEKRLLAAQQDGSWPKDRDANNVAKLLHATLQSLAVRARGGESRTSLEAMYSGAVDILC 196
BLAST of mRNA_P-wetherbeei_contig16728.1.1 vs. uniprot
Match: A0A420FZU9_9BURK (TetR family transcriptional regulator n=1 Tax=Paraburkholderia fungorum TaxID=134537 RepID=A0A420FZU9_9BURK) HSP 1 Score: 154 bits (389), Expect = 1.370e-43 Identity = 89/197 (45.18%), Postives = 124/197 (62.94%), Query Frame = 1
Query: 4 APPRGRPRQFDHAAVLGSALQIFWRQGYAATTIDSLAAAMGLNKPSLYNAYGDKQAIYRQALAAFMAQVEDEVNTALSSSADIRKALQRFYQGAIAVYC-AESPALGCFAICTATAEAVAHADIQHDLKAIITRLDALLAARFTTAKAAGQIASHLKPLELARITQAVLHSLAVRSRAGESRATLTQLANQAIALLC 591
A PRGRPR +D L A +FWR GYA T++D L+AA G+N+PSLY A+GDK+A+Y L ++ + AL+ + +ALQR Y GA+A Y AE LGCF I TAT EA + A+++ L + D RF A+AAG++A+ +P LA++ A+LHSLA+R+RAG+SRA+L A +ALLC
Sbjct: 9 ARPRGRPRAYDSDQALADARDVFWRSGYAGTSLDQLSAATGMNRPSLYGAFGDKRALYLTTLERYIEAGRVAMVHALAEDLPLPQALQRVYDGALAWYMPAEGDPLGCFMIGTATVEAASDAEVRTMLAEGLRTYDKAFEKRFKLAQAAGELAADAQPAVLAKLASAILHSLALRARAGDSRASLRATAVAGVALLC 205
BLAST of mRNA_P-wetherbeei_contig16728.1.1 vs. uniprot
Match: A0A1V9UPZ3_9PSED (TetR family transcriptional regulator n=1 Tax=Pseudomonas sp. Bc-h TaxID=1943632 RepID=A0A1V9UPZ3_9PSED) HSP 1 Score: 151 bits (382), Expect = 8.960e-43 Identity = 87/195 (44.62%), Postives = 129/195 (66.15%), Query Frame = 1
Query: 13 RGRPRQFDHAAVLGSALQIFWRQGYAATTIDSLAAAMGLNKPSLYNAYGDKQAIYRQALAAFMAQVEDEVNTALSSSA-DIRKALQRFYQGAIAVYCA-ESPALGCFAICTATAEAVAHADIQHDLKAIITRLDALLAARFTTAKAAGQIASHLKPLELARITQAVLHSLAVRSRAGESRATLTQLANQAIALLC 591
RGRPR +D A L AL +FW GY+ +++DS+A A G+N+PSLY A+GDK AIY +AL + +++ AL+S+ + +AL RFY+G +++Y + E GCFAI TATAEAV H I+ L ++RLDA L AR +A +G++ + P LA + A+LHS+++R+RAG+ R LT+LA A+ +LC
Sbjct: 12 RGRPRAYDPDAALQKALGVFWSTGYSGSSLDSIAIAAGMNRPSLYAAFGDKHAIYLKALEQYWDFAAADIHQALTSTELTLPEALMRFYEGQLSIYYSGEGQPRGCFAIGTATAEAVEHVQIRELLAERLSRLDAELEARLRSAVESGELDTEADPAALAVLASAMLHSISIRARAGKPREELTELARNAVNVLC 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16728.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16728.1.1 >prot_P-wetherbeei_contig16728.1.1 ID=prot_P-wetherbeei_contig16728.1.1|Name=mRNA_P-wetherbeei_contig16728.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp MAPPRGRPRQFDHAAVLGSALQIFWRQGYAATTIDSLAAAMGLNKPSLYNback to top mRNA from alignment at P-wetherbeei_contig16728:165..767- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16728.1.1 ID=mRNA_P-wetherbeei_contig16728.1.1|Name=mRNA_P-wetherbeei_contig16728.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig16728:165..767- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16728:165..767- >mRNA_P-wetherbeei_contig16728.1.1 ID=mRNA_P-wetherbeei_contig16728.1.1|Name=mRNA_P-wetherbeei_contig16728.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig16728:165..767- (Phaeothamnion wetherbeei SAG_119_79)back to top |