mRNA_P-wetherbeei_contig16722.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16722.1.1 vs. uniprot
Match: A0A6L5FRI2_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FRI2_9HYPH) HSP 1 Score: 243 bits (619), Expect = 3.260e-77 Identity = 117/179 (65.36%), Postives = 142/179 (79.33%), Query Frame = 1
Query: 1 LVKLAKSNPGELVYASAGRGTATHLTTELFNLMAGVKMTPVHYKGGGDTIKDLLSGEVKIMFSSIAPVLGFVREGKLLGVATTGSKRDPALPNLPTVAEAALPGFDVRLWMGVLAPTGTPKPIIDLLSSEIGKAIEHPNVTKTLAAQGFAPMKGGAGDFDAFYRSEVAKWAKVVQATGM 537
L+KLAKS PGEL+YASAG GTATHL ELFN +AG KM PVHYKGGG+T+KDLLSGEVK+MFS+I PVLGFV+EG+L G+ATT KR+ L NLPT+AE+ LPGFD+ LW G+ AP GTPKPI+D L +E+ KA++ P V + LA QGF PM G +F FY +E AKWAKVV+A G+
Sbjct: 155 LIKLAKSKPGELLYASAGTGTATHLGAELFNSIAGTKMMPVHYKGGGETVKDLLSGEVKLMFSTIPPVLGFVKEGRLKGIATTRIKREAVLRNLPTIAESGLPGFDMPLWFGLAAPKGTPKPIVDKLVAELNKALKQPEVLQALAKQGFEPMIMGPEEFGKFYVTEAAKWAKVVKAVGL 333
BLAST of mRNA_P-wetherbeei_contig16722.1.1 vs. uniprot
Match: UPI001E476E1F (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Leptospira sp. severe_002 TaxID=2838237 RepID=UPI001E476E1F) HSP 1 Score: 242 bits (618), Expect = 3.630e-77 Identity = 117/179 (65.36%), Postives = 141/179 (78.77%), Query Frame = 1
Query: 1 LVKLAKSNPGELVYASAGRGTATHLTTELFNLMAGVKMTPVHYKGGGDTIKDLLSGEVKIMFSSIAPVLGFVREGKLLGVATTGSKRDPALPNLPTVAEAALPGFDVRLWMGVLAPTGTPKPIIDLLSSEIGKAIEHPNVTKTLAAQGFAPMKGGAGDFDAFYRSEVAKWAKVVQATGM 537
LV LAKS PG++ YA+AGRG+ATHL E F+++AG+K TPVHY+GGGD +KDLLSG+VK+MFSSIAPV FV++G+LL +ATTG KRDPA P++PTVAE+ PGFDVRLWMGV GTPK +I L KA+E P V KTLAAQGFAP+ G A DFD FYR+E KWAKVV + GM
Sbjct: 146 LVALAKSKPGDVQYATAGRGSATHLNHEYFDMIAGIKTTPVHYRGGGDAVKDLLSGQVKMMFSSIAPVQAFVKDGRLLAIATTGPKRDPAFPDVPTVAESGYPGFDVRLWMGVATTGGTPKDVIKKLDDANRKAVESPEVQKTLAAQGFAPIVGSAEDFDKFYRAERDKWAKVVTSAGM 324
BLAST of mRNA_P-wetherbeei_contig16722.1.1 vs. uniprot
Match: A0A140GUW7_9HYPH (Extra-cytoplasmic solute receptor protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GUW7_9HYPH) HSP 1 Score: 242 bits (618), Expect = 3.850e-77 Identity = 115/179 (64.25%), Postives = 141/179 (78.77%), Query Frame = 1
Query: 1 LVKLAKSNPGELVYASAGRGTATHLTTELFNLMAGVKMTPVHYKGGGDTIKDLLSGEVKIMFSSIAPVLGFVREGKLLGVATTGSKRDPALPNLPTVAEAALPGFDVRLWMGVLAPTGTPKPIIDLLSSEIGKAIEHPNVTKTLAAQGFAPMKGGAGDFDAFYRSEVAKWAKVVQATGM 537
LVKLAK PG L YA+AGRG+ATHLT+ELFN++AG+K VHY+GGGDT+KDLLSG VK+MFSSIAPV FVR+G+L+G+ATTG KRDPA P+LPT+AE+ PGFDVRLW+G+ AP TPK II L+ A++ P + K L AQGFAPM G A DFD FYR+E AKW KV+ +G+
Sbjct: 148 LVKLAKEQPGVLQYATAGRGSATHLTSELFNMVAGIKTVAVHYRGGGDTVKDLLSGGVKMMFSSIAPVQDFVRDGRLIGLATTGPKRDPAFPDLPTIAESGYPGFDVRLWIGMTAPAATPKDIIHKLADANTNALQSPEIKKALEAQGFAPMNGSAEDFDTFYRAERAKWGKVITESGL 326
BLAST of mRNA_P-wetherbeei_contig16722.1.1 vs. uniprot
Match: A0A6N7GSK5_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GSK5_9HYPH) HSP 1 Score: 219 bits (559), Expect = 2.200e-67 Identity = 107/179 (59.78%), Postives = 129/179 (72.07%), Query Frame = 1
Query: 1 LVKLAKSNPGELVYASAGRGTATHLTTELFNLMAGVKMTPVHYKGGGDTIKDLLSGEVKIMFSSIAPVLGFVREGKLLGVATTGSKRDPALPNLPTVAEAALPGFDVRLWMGVLAPTGTPKPIIDLLSSEIGKAIEHPNVTKTLAAQGFAPMKGGAGDFDAFYRSEVAKWAKVVQATGM 537
L+KL K+ PGEL+YA+AG GT+THL ELFN AG+KM PVHY+GGG T+KDLLSG+VKIMFS+I PVL FVR+G+L G+ATTGSKRD LP LPT+ EA LP FDV LW G++AP GTP+P+I L + +A+ P K AQGF M F FY +E KW KVVQA GM
Sbjct: 218 LIKLGKAKPGELLYATAGAGTSTHLAAELFNTTAGIKMMPVHYRGGGATVKDLLSGQVKIMFSTIPPVLSFVRDGRLRGIATTGSKRDFVLPELPTIMEAGLPNFDVPLWFGLVAPKGTPQPVIQKLVQALDRAMATPETKKVFDAQGFTTMPMRPEAFAKFYVAEALKWGKVVQALGM 396
BLAST of mRNA_P-wetherbeei_contig16722.1.1 vs. uniprot
Match: A0A1F4DL58_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DL58_9PROT) HSP 1 Score: 178 bits (451), Expect = 9.110e-53 Identity = 86/182 (47.25%), Postives = 120/182 (65.93%), Query Frame = 1
Query: 1 LVKLAKSNPGELVYASAGRGTATHLTTELFNLMAGVKMTPVHYKGGGDTIKDLLSGEVKIMFSSIAPVLGFVREGKLLGVATTGSKRDPALPNLPTVAEAALPGFDVRLWMGVLAPTGTPKPIIDLLSSEIGKAIEHPNVTKTLAAQGFAPMKGGAGDFDAFYRSEVAKWAKVVQATGMVGE 546
L+ LA++ PG+++YASAG GT+THL LF +AG+K+ V YKGGG I D+L+G+V + F + A V R G+L G+A TG +R LP+LPT+AE+ LPG+++ W+G+ AP GTP+ +++ LS E + + V L AQG P G+F AF +SEV KWAKVV ATGM E
Sbjct: 81 LISLARARPGQIMYASAGSGTSTHLAAALFEHLAGIKLVHVPYKGGGPAIVDVLAGQVPVTFGTAASVSPHTRSGRLRGLAVTGGQRSAVLPDLPTIAESGLPGYEMLNWLGLFAPAGTPRAVVEKLSGEAIRIVRLLEVRDRLNAQGAEPSPLATGEFAAFVKSEVEKWAKVVAATGMTAE 262
BLAST of mRNA_P-wetherbeei_contig16722.1.1 vs. uniprot
Match: A0A1F4CLQ4_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CLQ4_9PROT) HSP 1 Score: 175 bits (443), Expect = 3.450e-52 Identity = 83/182 (45.60%), Postives = 119/182 (65.38%), Query Frame = 1
Query: 1 LVKLAKSNPGELVYASAGRGTATHLTTELFNLMAGVKMTPVHYKGGGDTIKDLLSGEVKIMFSSIAPVLGFVREGKLLGVATTGSKRDPALPNLPTVAEAALPGFDVRLWMGVLAPTGTPKPIIDLLSSEIGKAIEHPNVTKTLAAQGFAPMKGGAGDFDAFYRSEVAKWAKVVQATGMVGE 546
L+ +A++ PGE++YASAG GT+THL LF +A VK+ + YKGGG I D+L+G+V + F + A V + G+L G+A TG KR LP+LPT+AE+ LPG+++ W+G+ P GTP+ +++ LS E + + P V + L AQG P G +F F +SEV KWAKVV ATGM +
Sbjct: 32 LIAMARARPGEIMYASAGAGTSTHLAAALFEHLARVKLVHIPYKGGGPAIVDVLAGQVPVTFGTAASVSPHTKSGRLRGLAVTGGKRSAVLPDLPTIAESGLPGYEMLNWLGLFTPAGTPRAVVEKLSVEATRIMRTPEVRERLNAQGAEPSPLGTEEFTVFVKSEVEKWAKVVAATGMTAD 213
BLAST of mRNA_P-wetherbeei_contig16722.1.1 vs. uniprot
Match: A0A536SK61_9PROT (Tripartite tricarboxylate transporter substrate binding protein (Fragment) n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SK61_9PROT) HSP 1 Score: 174 bits (440), Expect = 1.490e-51 Identity = 89/182 (48.90%), Postives = 117/182 (64.29%), Query Frame = 1
Query: 1 LVKLAKSNPGELVYASAGRGTATHLTTELFNLMAGVKMTPVHYKGGGDTIKDLLSGEVKIMFSSIAPVLGFVREGKLLGVATTGSKRDPALPNLPTVAEAALPGFDVRLWMGVLAPTGTPKPIIDLLSSEIGKAIEHPNVTKTLAAQGFAPMKGGAGDFDAFYRSEVAKWAKVVQATGMVGE 546
L+ LA++ PGE+ +AS+G GT HL ELFN MAGVK+ V YKG + DLL G+V+IMFS++ P L V++GKL +A T KR PA P LPT+ EAALPGF+ W GV+AP GTP II L+ EI + P V + L+ QG + +F A+ +SE AKWAKVV+ +G E
Sbjct: 46 LIALARARPGEINFASSGHGTPAHLAGELFNSMAGVKLVHVPYKGAAPALADLLGGQVQIMFSTMPPALPHVKDGKLRALAVTSRKRSPATPELPTIDEAALPGFEAITWHGVVAPAGTPAAIIAWLNREIVAILHLPEVVERLSGQGAEALGSTPEEFAAYIKSESAKWAKVVRESGAKAE 227
BLAST of mRNA_P-wetherbeei_contig16722.1.1 vs. uniprot
Match: A0A5C8NZ61_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Burkholderiaceae TaxID=119060 RepID=A0A5C8NZ61_9BURK) HSP 1 Score: 177 bits (448), Expect = 1.760e-51 Identity = 79/178 (44.38%), Postives = 122/178 (68.54%), Query Frame = 1
Query: 1 LVKLAKSNPGELVYASAGRGTATHLTTELFNLMAGVKMTPVHYKGGGDTIKDLLSGEVKIMFSSIAPVLGFVREGKLLGVATTGSKRDPALPNLPTVAEAALPGFDVRLWMGVLAPTGTPKPIIDLLSSEIGKAIEHPNVTKTLAAQGFAPMKGGAGDFDAFYRSEVAKWAKVVQATG 534
L+ L K+NPG++ YAS+G GT+ HL+ ELF M G MT + Y+G + DLL+G+V++MF ++ + +R GKL +A T +KR PALP++PT+AEA +PG++ W G++AP GTP+PI+D L +I K++ P+V + L QG P+ +F + ++E+AKWAKVV+A+G
Sbjct: 151 LIALLKANPGKMNYASSGNGTSIHLSAELFKSMTGTFMTHIPYRGSAPAVADLLAGQVELMFDNLPSAMPHIRSGKLRALAVTSAKRAPALPDVPTIAEAGVPGYEASSWFGIVAPAGTPRPIVDKLQQQIAKSLAQPDVREKLLGQGANPVGNMPEEFAKYIQAEIAKWAKVVKASG 328
BLAST of mRNA_P-wetherbeei_contig16722.1.1 vs. uniprot
Match: A0A536XPA0_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XPA0_9PROT) HSP 1 Score: 176 bits (447), Expect = 2.120e-51 Identity = 90/182 (49.45%), Postives = 117/182 (64.29%), Query Frame = 1
Query: 1 LVKLAKSNPGELVYASAGRGTATHLTTELFNLMAGVKMTPVHYKGGGDTIKDLLSGEVKIMFSSIAPVLGFVREGKLLGVATTGSKRDPALPNLPTVAEAALPGFDVRLWMGVLAPTGTPKPIIDLLSSEIGKAIEHPNVTKTLAAQGFAPMKGGAGDFDAFYRSEVAKWAKVVQATGMVGE 546
L+ LAK+ PGE+ +AS+G GT HL ELFN MAGVKM V YKG + DLL G+V++MFS++ P L V++GKL +A T +KR PA P LPTV E ALPGF+ W GV+ P GTP I+ L+ EI + P V + L+AQG + +F A+ RSE AKWAKVV+ +G E
Sbjct: 145 LIALAKARPGEINFASSGHGTPAHLAGELFNSMAGVKMVHVPYKGAAPALADLLGGQVQLMFSTMPPALPHVKDGKLRALAVTSAKRSPATPELPTVDEIALPGFEANTWHGVVVPAGTPAAIVARLNREIVAILHLPEVVERLSAQGAEAVGSTPEEFAAYIRSETAKWAKVVRDSGAKAE 326
BLAST of mRNA_P-wetherbeei_contig16722.1.1 vs. uniprot
Match: UPI001E37ACC4 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Acidovorax sp. D4N7 TaxID=2898584 RepID=UPI001E37ACC4) HSP 1 Score: 176 bits (447), Expect = 2.420e-51 Identity = 82/178 (46.07%), Postives = 122/178 (68.54%), Query Frame = 1
Query: 1 LVKLAKSNPGELVYASAGRGTATHLTTELFNLMAGVKMTPVHYKGGGDTIKDLLSGEVKIMFSSIAPVLGFVREGKLLGVATTGSKRDPALPNLPTVAEAALPGFDVRLWMGVLAPTGTPKPIIDLLSSEIGKAIEHPNVTKTLAAQGFAPMKGGAGDFDAFYRSEVAKWAKVVQATG 534
L+ LAK+ G + YAS+G G +THL+ ELFN MAGVKM + YKG + D++SG+ +MF ++ + FV+ GKL +A T ++R P+ P++PTVAE+ LPGF+ W G++AP GTP+ +ID L++E+ K +E P+V + AQGFA +F++F +SEV KWAKV +A+G
Sbjct: 150 LIALAKTKSGGINYASSGNGQSTHLSAELFNAMAGVKMNHIPYKGSAPALTDVMSGQADVMFDTMLSAMPFVKGGKLKAIAVTSAQRSPSAPDIPTVAESDLPGFEAIAWNGLMAPAGTPREVIDRLNAELKKVLESPDVKQRFDAQGFAAQWNTPANFNSFVQSEVEKWAKVAKASG 327 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16722.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16722.1.1 >prot_P-wetherbeei_contig16722.1.1 ID=prot_P-wetherbeei_contig16722.1.1|Name=mRNA_P-wetherbeei_contig16722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=183bp LVKLAKSNPGELVYASAGRGTATHLTTELFNLMAGVKMTPVHYKGGGDTIback to top mRNA from alignment at P-wetherbeei_contig16722:943..1491- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16722.1.1 ID=mRNA_P-wetherbeei_contig16722.1.1|Name=mRNA_P-wetherbeei_contig16722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig16722:943..1491- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16722:943..1491- >mRNA_P-wetherbeei_contig16722.1.1 ID=mRNA_P-wetherbeei_contig16722.1.1|Name=mRNA_P-wetherbeei_contig16722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig16722:943..1491- (Phaeothamnion wetherbeei SAG_119_79)back to top |