prot_P-wetherbeei_contig1672.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1672.4.1
Unique Nameprot_P-wetherbeei_contig1672.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length393
Homology
BLAST of mRNA_P-wetherbeei_contig1672.4.1 vs. uniprot
Match: D8LK31_ECTSI (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK31_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 7.800e-44
Identity = 113/337 (33.53%), Postives = 146/337 (43.32%), Query Frame = 0
Query:    3 AVWAKRKAKASDPDAMDLLAKVIRLNPDSYSLWNYRREAVLSLLSQIGDEQPANGAAVAG------------------------IYQTELSLAXXXXXXXXXXXXXXXXXXXALERGLEAVGGADALDRELEXXXXXXXXXXXXXXXXXXXXXXVRLRGLPVAEDFAFTTGKIAQNFSNYSAFHHRSELLPFVAAERGSQEGRWQLLAEELDMAHQAMYTEPADQSAWWYHQFLIRWAGAGCPVAASPXXXXXXXXXADVPLAATSGPTTAFGAEAKDGNGGSSGDNCGDENSSGGEPEDGAGTVERYEAVLHAEAACMRELVELDDGGKWPTLTLL 315
            A+  KR     D +   LL K++RL+PD YS+WN+R+EAVL+ LS+I D     G +  G                        IY+ EL+L+                   ALERGL+ +GG  AL  +L                           GL   E+F FTT KI QNFSNYSAFH RS++LP +  E G    RWQLL++ELD+ H AM+TEPADQS WWYH FL+ WA  G                                            D+C D               ERYE +L AEAA + EL+E++   KW  + LL
Sbjct:   32 AIRHKRATGQMDAEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSRIEDAHSRQGGSDDGDKAAEEISSGTLLSPSVQEQQKKKIYEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALAGDLALCATFLELDGRNFHCWAHRMWVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHD--RWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGT-------------------------------------------DSCSDS--------------ERYENILRAEAATLGELIEVEVRCKWAEVALL 309          
BLAST of mRNA_P-wetherbeei_contig1672.4.1 vs. uniprot
Match: A0A835Z1Z5_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z5_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.090e-41
Identity = 90/206 (43.69%), Postives = 114/206 (55.34%), Query Frame = 0
Query:   18 MDLLAKVIRLNPDSYSLWNYRREAVLSLLSQIGDEQPANGAAVAGIYQT-------ELSLAXXXXXXXXXXXXXXXXXXXALERGLEAVGGADALDRELEXXXXXXXXXXXXXXXXXXXXXXVRLRGLPVAEDFAFTTGKIAQNFSNYSAFHHRSELLPFVAAERGSQEGRWQLLAEELDMAHQAMYTEPADQSAWWYHQFLIRWA 216
            +D++ KV+R+NPD YS+WNYR+EA L +L      + A G A  G+ +        EL+LA                    LERG +A+GG  A  RELE                      V   GL   EDFAFTT KI +NFSNYSAFH+RS+LLP VA  RG+  G   L+ +EL+M HQA +TEP DQSAWWYH+FL+ WA
Sbjct:   53 LDVVDKVVRVNPDYYSMWNYRKEAALPIL------EAAEGQAKVGVQERRAQVVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAG-GVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWA 251          
BLAST of mRNA_P-wetherbeei_contig1672.4.1 vs. uniprot
Match: M2Y9D7_GALSU (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y9D7_GALSU)

HSP 1 Score: 95.9 bits (237), Expect = 1.500e-18
Identity = 65/213 (30.52%), Postives = 102/213 (47.89%), Query Frame = 0
Query:    9 KAKASDPDAMDLLAKVIRLNPDSYSLWNYRREAVLSLLSQIGDEQPAN-GAAVAGIYQTELSLAXXXXXXXXXXXXXXXXXXXALERG---LEAVGGADALDRELEXXXXXXXXXXXXXXXXXXXXXXVRLRGL-PVAEDFAFTTGKIAQNFSNYSAFHHRSELLPFVAAERGSQEGRWQLLAEELDMAHQAMYTEPADQSAWWYHQFLIRWA 216
            K +     A+ L+ +V+ LNPD YSLWNY +  VL+ + +I + +PA+   A   ++ +E  L                     L+     L +        +ELE                        +RGL P  E+  F T +I  NFSNYSA+HHRS +LP +  ++  Q   +  + E+L++  QA++TEP DQSAW+Y ++L+R A
Sbjct:   30 KQRDFSSQALSLVNRVLELNPDEYSLWNYHKRFVLNEIEKIMNYEPASFQEAAEQLFDSEFELTQRALYRHPKAYSAWQHRIFLLKTAKYHLPSKIYEGYFKKELEICAKLLDLDDRNFHGWAHRMRVGDIRGLQPSREELQFVTERIYGNFSNYSAWHHRSRILPILFKDQRDQ--YYLAVQEDLELVKQAIFTEPEDQSAWFYFRWLLRGA 240          
BLAST of mRNA_P-wetherbeei_contig1672.4.1 vs. uniprot
Match: A0A7R9U2X8_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2X8_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 4.330e-18
Identity = 84/197 (42.64%), Postives = 112/197 (56.85%), Query Frame = 0
Query:   17 AMDLLAKVIRLNPDSYSLWNYRREAVLSLLSQIGDEQPANGAAVAGIYQTELSLAXXXXXXXXXXXXXXXXXXXALERGLEAVGGADALDRELEXXXXXXXXXXXXXXXXXXXXXXVRLRGLPVAEDFAFTTGKIAQNFSNYSAFHHRSELLPFVAAERGSQEGRWQLLAEELDMAHQAMYTEPADQSAWWYHQFLI 213
            A DL A+++R+NPD+YS+WNYRR+    +L   G+  P +  A   + Q EL ++                    L+R LE+ G    L  E  XXXXXXXXXXXXXXXXXXX     L G+   E++ +T  ++  NFSNYSAFH RS +L  +A E G  E +   L +ELD   Q   T P DQSAWWY++FL+
Sbjct:   61 AKDLTAQLLRVNPDNYSVWNYRRQ----ILFASGETAPESWKAPPDVAQEELVMSAEALKRQPKSYPAWYHRKWILDR-LES-GRERTLQSEXXXXXXXXXXXXXXXXXXXXXRYVAHLAGVTPEENYEYTEDRLNANFSNYSAFHERSRILASLA-EYG--EDKISTLQQELDFVQQITVTAPDDQSAWWYYRFLL 248          
BLAST of mRNA_P-wetherbeei_contig1672.4.1 vs. uniprot
Match: A0A0M0JE27_9EUKA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JE27_9EUKA)

HSP 1 Score: 95.1 bits (235), Expect = 4.640e-18
Identity = 72/227 (31.72%), Postives = 98/227 (43.17%), Query Frame = 0
Query:    3 AVWAKRKAKASDPDAMDLLAKVIRLNPDSYSLWNYRREAVLSLLSQIGDEQPANGAAVAGIYQTELSLAXXXXXXXXXXXXXXXXXXXALERGLEAVGGADALDRELEXXXXXXXXXXXXXXXXXXXXXXVRLRGLPVAEDFAFTTGKIAQNFSNYSAFHHRSELLPFVAAERGSQEGRWQL---LAEELDMAHQAMYTEPADQSAWWYHQFLIRWAGAGCPVAASP 226
            A   +R AK  D  +++ +AKV+  NPD  ++WN+RRE VL  +    D      A +A    T+  L                      E              EL+                      VR+ G+    + AFTT KI  NFSNYSA+H+RS+LLP V A  G+ EG  QL   L  EL++   A +T P D SAW+YH++LI     G   A  P
Sbjct:   32 AAMERRAAKVYDAASLEAVAKVVTENPDFATMWNFRRE-VLGHMFPDADVAARKAACLAEFALTQECLGINPKSYPVWYHREWVLLWGECEWQWPV---------ELKLTAKLLALDDRNFHCWTYRRNVVRVAGVTAEAELAFTTTKIQANFSNYSAWHYRSKLLPAVHASAGA-EGAAQLGAVLRNELELVRNAFFTAPEDSSAWFYHRWLIAQLAPGAAAALPP 247          
BLAST of mRNA_P-wetherbeei_contig1672.4.1 vs. uniprot
Match: A9SYY6_PHYPA (Geranylgeranyl transferase type-2 subunit alpha n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9SYY6_PHYPA)

HSP 1 Score: 96.7 bits (239), Expect = 5.700e-18
Identity = 84/198 (42.42%), Postives = 116/198 (58.59%), Query Frame = 0
Query:   17 AMDLLAKVIRLNPDSYSLWNYRREAVLSLLSQIGDEQPANGAAVAGIYQTELSLAXXXXXXXXXXXXXXXXXXXALERGLEAVGGADALDRELEXXXXXXXXXXXXXXXXXXXXXXVRLRGLPVAEDFAFTTGKIAQNFSNYSAFHHRSELLPFVAAERGSQEGRWQ-LLAEELDMAHQAMYTEPADQSAWWYHQFLI 213
            A+D  A+++ LNP+ YS WNYR+ AV  LL+   DE+         I QTEL +  XXXXXXXXXXXXXXXXX  ++ GL        +D E                XXXXXX   + +G+ V ++  FTT KI +NFSNYSA+H+RS LL  ++    ++ GR Q  L EE ++   + YT+P DQS W+Y+ +L+
Sbjct:   48 ALDQNARLLELNPEFYSAWNYRKRAVRHLLNLESDEEVRKR-----IVQTELDVVVXXXXXXXXXXXXXXXXXWVIQFGLSP------MDAEFLLLKKLLKLDARNFHXXXXXXFVAKTKGVAVEDELLFTTDKINENFSNYSAWHNRSALLSEISKNEAAENGRVQERLQEEYELVKNSFYTDPDDQSGWFYYSWLL 234          
BLAST of mRNA_P-wetherbeei_contig1672.4.1 vs. uniprot
Match: A0A8J5DNR5_9CHEL (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5DNR5_9CHEL)

HSP 1 Score: 92.4 bits (228), Expect = 1.390e-17
Identity = 57/207 (27.54%), Postives = 97/207 (46.86%), Query Frame = 0
Query:    7 KRKAKASDPDAMDLLAKVIRLNPDSYSLWNYRREAVLSLLSQIGDEQPANGAAVAGIYQTELSLAXXXXXXXXXXXXXXXXXXXALERGLEAVGGADALDRELEXXXXXXXXXXXXXXXXXXXXXXVRLRGLPVAEDFAFTTGKIAQNFSNYSAFHHRSELLPFVAAERGSQEGRWQLLAEELDMAHQAMYTEPADQSAWWYHQFLI 213
            KR+ +  D DA+ L  +++ LNPD YSLWN+R+E +L       +E+      +  +++ +L                       ++   +        +REL+                      V+  G+   ++  F++ KI  NFSNYSA+H+RS+LLP V A    ++     L EE ++   A +T+P DQSAW+YH++L+
Sbjct:   38 KRENRELDEDALKLTTEILSLNPDFYSLWNFRKEIILEFKRTRKEEE------IIKLFKDDLGFTEICLRNNPKSYCAWHHRHWVMQNTPKP-----DWERELKICNQYLLLDERNFHCWDYRRFVVQESGISNNKELEFSSEKIENNFSNYSAWHYRSKLLPLVHAGNSYKKIDESKLLEEFELVQNAAFTDPNDQSAWFYHRWLL 233          
BLAST of mRNA_P-wetherbeei_contig1672.4.1 vs. uniprot
Match: V4C0L0_LOTGI (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4C0L0_LOTGI)

HSP 1 Score: 92.4 bits (228), Expect = 2.010e-17
Identity = 68/215 (31.63%), Postives = 104/215 (48.37%), Query Frame = 0
Query:    7 KRKAKASDPDAMDLLAKVIRLNPDSYSLWNYRREAVLSLLSQIGDEQPANGAAVAGIYQTELSLAXXXXXXXXXXXXXXXXXXXALERGLEAVGGADALDRELEXXXXXXXXXXXXXXXXXXXXXXVRLRGLPVAEDFAFTTGKIAQNFSNYSAFHHRSELLPFVAAERGSQEG-RWQLLAEELDMAHQAMYTEPADQSAWWYHQFLIRWAGAGC 220
            KR+ K  D +A+ +  +++ +NPD YSLWN+R+E  L     +   +  N      +Y  E  L                     +              REL+              XXXXXXXXV+   +P  ++F FTT KIA NFSNYS++H+RS+LLP +  +     G +  +L +E +    A +T+P DQS+W+YH++L+   G GC
Sbjct:   38 KRENKEYDEEALKITGEILSVNPDFYSLWNFRKEIFLHF-KDVKPTEELNKLFEEELYFLESCLKVNPKSYGTWHHRCFVMTTMPIPDWT----------RELQLCNKFLEYDERNFHXXXXXXXXVKTSNVPAKDEFDFTTAKIASNFSNYSSWHYRSKLLPQLYPDSHHSSGVQEDILLQEFETVQNAFFTDPNDQSSWFYHRWLL---GRGC 238          
BLAST of mRNA_P-wetherbeei_contig1672.4.1 vs. uniprot
Match: X2A7L7_CAPTE (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Capitella teleta TaxID=283909 RepID=X2A7L7_CAPTE)

HSP 1 Score: 94.7 bits (234), Expect = 2.130e-17
Identity = 58/208 (27.88%), Postives = 100/208 (48.08%), Query Frame = 0
Query:    7 KRKAKASDPDAMDLLAKVIRLNPDSYSLWNYRREAVLSLLSQIGDEQPANGAAVAGIYQTELSLAXXXXXXXXXXXXXXXXXXXALERGLEAVGGADALDRELEXXXXXXXXXXXXXXXXXXXXXXVRLRGLPVAEDFAFTTGKIAQNFSNYSAFHHRSELLPFVAAERGSQEGRWQ-LLAEELDMAHQAMYTEPADQSAWWYHQFLI 213
            KRK +  D +A+++   ++  NPD Y+LWN+RRE +  + S   +E       V   +  EL                       +E   +         REL+                      V++  +P+ E+FAFTT KI+ NFSN+S++H+RS+LL  +  ++ S  G  + ++ +E ++   A +T+P DQSAW+YH++L+
Sbjct:   64 KRKNREYDHEALEVTGNILAANPDFYTLWNFRREILTHIKSNWEEEN------VFKTFDGELYFLEQCLKVNPKSYGSWQHRCWTMENHTKP-----DWTRELKLCNKFLEYDERNFHCWDYRRFVVQMSSVPLKEEFAFTTEKISTNFSNFSSWHYRSKLLQILHPDKSSSVGVAENVMLDEFELVQNAFFTDPNDQSAWFYHRWLL 260          
BLAST of mRNA_P-wetherbeei_contig1672.4.1 vs. uniprot
Match: A0A087TEC0_STEMI (Geranylgeranyl transferase type-2 subunit alpha (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087TEC0_STEMI)

HSP 1 Score: 92.0 bits (227), Expect = 2.860e-17
Identity = 58/210 (27.62%), Postives = 96/210 (45.71%), Query Frame = 0
Query:    4 VWAKRKAKASDPDAMDLLAKVIRLNPDSYSLWNYRREAVLSLLSQIGDEQPANGAAVAGIYQTELSLAXXXXXXXXXXXXXXXXXXXALERGLEAVGGADALDRELEXXXXXXXXXXXXXXXXXXXXXXVRLRGLPVAEDFAFTTGKIAQNFSNYSAFHHRSELLPFVAAERGSQEGRWQLLAEELDMAHQAMYTEPADQSAWWYHQFLI 213
            +++KR+    D + ++L  +++  NPD Y+LWNYRRE +L L      E+      +  +   EL L                     +E   +A        +EL+                      V+  G+   E+  ++T  I  NFSNYSA+H+RS LLP V  +      +  +L +ELD+   A +T+P+DQS W+YH++L+
Sbjct:   35 IFSKREHGEYDEEGLELTGRLLEQNPDFYTLWNYRREILLFLKPTKNQEE------LKALTLVELGLTQNCLRVNPKSYGAWHHRFWVMEFDPDA-----DWKKELKLCGYFLSKDERNFHCWDYRRLVVKKCGVAPDEELTYSTELIEANFSNYSAWHYRSTLLPIVYPDHSKASLKEDILLKELDIVQNAAFTDPSDQSVWFYHRWLL 233          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1672.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK31_ECTSI7.800e-4433.53Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A835Z1Z5_9STRA3.090e-4143.69Geranylgeranyl transferase type-2 subunit alpha n=... [more]
M2Y9D7_GALSU1.500e-1830.52Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A7R9U2X8_9STRA4.330e-1842.64Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A0M0JE27_9EUKA4.640e-1831.72Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A9SYY6_PHYPA5.700e-1842.42Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A8J5DNR5_9CHEL1.390e-1727.54Geranylgeranyl transferase type-2 subunit alpha n=... [more]
V4C0L0_LOTGI2.010e-1731.63Geranylgeranyl transferase type-2 subunit alpha n=... [more]
X2A7L7_CAPTE2.130e-1727.88Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A087TEC0_STEMI2.860e-1727.62Geranylgeranyl transferase type-2 subunit alpha (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002088Protein prenyltransferase, alpha subunitPFAMPF01239PPTAcoord: 105..134
e-value: 1.1E-7
score: 31.2
coord: 64..94
e-value: 2.9E-10
score: 39.4
coord: 16..43
e-value: 2.7E-7
score: 30.0
coord: 186..215
e-value: 0.0034
score: 17.1
coord: 142..168
e-value: 8.4E-5
score: 22.2
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 104..138
score: 16.630032
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 13..48
score: 12.195531
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 63..97
score: 13.797617
NoneNo IPR availableGENE3D1.25.40.120Protein prenylyltransferasecoord: 1..229
e-value: 1.5E-72
score: 246.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..284
NoneNo IPR availablePANTHERPTHR11129PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNITcoord: 5..325
NoneNo IPR availableSUPERFAMILY48439Protein prenylyltransferasecoord: 4..217
IPR032955Geranylgeranyl transferase type-2 subunit alphaPANTHERPTHR11129:SF2GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT ALPHAcoord: 5..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1672contigP-wetherbeei_contig1672:4314..5492 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1672.4.1mRNA_P-wetherbeei_contig1672.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1672 4245..5826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1672.4.1 ID=prot_P-wetherbeei_contig1672.4.1|Name=mRNA_P-wetherbeei_contig1672.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=393bp
MTAVWAKRKAKASDPDAMDLLAKVIRLNPDSYSLWNYRREAVLSLLSQIG
DEQPANGAAVAGIYQTELSLAAAAIRRNPKSYATWHHRRWALERGLEAVG
GADALDRELELCTQLLELDARNFHCWRHRKWAVRLRGLPVAEDFAFTTGK
IAQNFSNYSAFHHRSELLPFVAAERGSQEGRWQLLAEELDMAHQAMYTEP
ADQSAWWYHQFLIRWAGAGCPVAASPAPAPAAAAAADVPLAATSGPTTAF
GAEAKDGNGGSSGDNCGDENSSGGEPEDGAGTVERYEAVLHAEAACMREL
VELDDGGKWPTLTLLSLLLLLSKRAQAARSAAAGSDGGGGCGGGGGDISC
GAAAGTAGAAGAERERKREWRQLQMARWQLRKKQHGRRSAPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002088Prenyl_trans_a
IPR032955RabGGTase_alpha