mRNA_P-wetherbeei_contig16678.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16678.1.1 vs. uniprot
Match: A0A3C0TX08_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TX08_9PROT) HSP 1 Score: 324 bits (831), Expect = 3.090e-109 Identity = 162/219 (73.97%), Postives = 181/219 (82.65%), Query Frame = 3
Query: 219 MEPHVRSQLEDLVLDPQRPLIVTDADEVVAYFIAGLERFLHRNGHWLDLKSFAITGNIRRQGSNEASTQAQVKDLLAEFFNTDTELLDPVDGAAEALQALNARAQIIVLSNVPPSAHAARQRWLRRHGMDYPLVANAGSKGLPLRYLEEQINAPVFFLDDLPPHLDAVAEQARSVSLLHFIADKRLAALVGPAQNCHLHTSDWPDARAFIETKLDLLGF 875
MEP V QL L LDP RPLIVTDADEV+ YFI+GLERFL RNG+WLDLK+FAITGNIR+QGSNE S++ QV+ LLA+FF TDTELLDPVDGAA+AL AL RAQIIVLSNVP A ARQRWLR+HGMD+PLVANAGSKGLPLRYL +QI AP+FFLDDLPPH+DAVAE A V LHFIADKRLA+ PAQN H HTS WPDA+ FI KL+ G+
Sbjct: 1 MEPFVHDQLRKLNLDPHRPLIVTDADEVLTYFISGLERFLSRNGYWLDLKNFAITGNIRKQGSNEVSSREQVQGLLADFFITDTELLDPVDGAADALNALARRAQIIVLSNVPLEAQDARQRWLRKHGMDFPLVANAGSKGLPLRYLSQQIVAPMFFLDDLPPHIDAVAEHASQVWRLHFIADKRLASFASPAQNSHFHTSHWPDAQNFIGGKLEESGY 219
BLAST of mRNA_P-wetherbeei_contig16678.1.1 vs. uniprot
Match: A0A353LRG5_9PROT (Uncharacterized protein n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LRG5_9PROT) HSP 1 Score: 272 bits (695), Expect = 1.650e-88 Identity = 134/215 (62.33%), Postives = 164/215 (76.28%), Query Frame = 3
Query: 231 VRSQLEDLVLDPQRPLIVTDADEVVAYFIAGLERFLHRNGHWLDLKSFAITGNIRRQGSNEASTQAQVKDLLAEFFNTDTELLDPVDGAAEALQALNARAQIIVLSNVPPSAHAARQRWLRRHGMDYPLVANAGSKGLPLRYLEEQINAPVFFLDDLPPHLDAVAEQARSVSLLHFIADKRLAALVGPAQNCHLHTSDWPDARAFIETKLDLLGF 875
+++QL+ L L +PLIVTDADEV+A FI GLE FL RNG WLDL+SFAI+GN++R + +A+V++LLA+FF DTE L PV GAA+AL AL+ R QIIVLSNVP AARQRWLR+HGMDYPLVAN+G KG +R+L I AP+FFLDDLPP+L +V+E V LLHFIAD RLAAL+GPA +CHLHT+ W DA A+I LDL GF
Sbjct: 6 IQAQLDALPLQSDQPLIVTDADEVIAQFIVGLEDFLTRNGFWLDLQSFAISGNVKRAEDHSVVERAEVQELLAQFFAADTESLLPVPGAADALSALSKRTQIIVLSNVPQPQRAARQRWLRQHGMDYPLVANSGPKGAAVRHLRSNIKAPIFFLDDLPPNLASVSELVEDVHLLHFIADSRLAALMGPAPDCHLHTTSWDDAHAYIAQALDLAGF 220
BLAST of mRNA_P-wetherbeei_contig16678.1.1 vs. uniprot
Match: A0A2E9XYD2_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9XYD2_9PROT) HSP 1 Score: 227 bits (578), Expect = 8.640e-71 Identity = 116/224 (51.79%), Postives = 157/224 (70.09%), Query Frame = 3
Query: 204 LELSQMEPHVRSQLEDLVLDPQRPLIVTDADEVVAYFIAGLERFLHRNGHWLDLKSFAITGNIRRQGSNEASTQAQVKDLLAEFFNTDTELLDPVDGAAEALQALNARAQIIVLSNVPPSAHAARQRWLRRHGMDYPLVANAGSKGLPLRYLEEQINAPVFFLDDLPPHLDAVAEQARSVSLLHFIADKRLAALVGPAQNCHLHTSDWPDARAFIETKLDLLGF 875
+E ++ V SQLE L L P RPLIV+DADEV+ F+ LE FL NGH++DL+SFA++GNIR + + + VK L+ +FF+ TE ++PVDGAAEAL AL+ RAQI+VLSNVP AR+R L ++GMDYPLVAN G KG + YL E+ AP+FFLDD+P ++ +VA +A +V+ LHFIAD RL +L+G A++ + DWP R+FIE +L GF
Sbjct: 1 MESDRLHDEVLSQLEALRLAPGRPLIVSDADEVIFAFVRSLEGFLLDNGHFMDLQSFALSGNIRDSATRQPVSAEMVKSLIGDFFSERTEQIEPVDGAAEALSALSERAQILVLSNVPLDQIPARRRALVKNGMDYPLVANIGRKGSAMAYLAERHEAPIFFLDDIPHNISSVARKAETVTRLHFIADHRLRSLLGQAEDADVRIDDWPSVRSFIEGRLSEQGF 224
BLAST of mRNA_P-wetherbeei_contig16678.1.1 vs. uniprot
Match: A0A2D6T0S3_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T0S3_9PROT) HSP 1 Score: 222 bits (565), Expect = 9.360e-69 Identity = 118/227 (51.98%), Postives = 148/227 (65.20%), Query Frame = 3
Query: 195 RAGLELSQMEPHVRSQLEDLVLDPQRPLIVTDADEVVAYFIAGLERFLHRNGHWLDLKSFAITGNIRRQGSNEASTQAQVKDLLAEFFNTDTELLDPVDGAAEALQALNARAQIIVLSNVPPSAHAARQRWLRRHGMDYPLVANAGSKGLPLRYLEEQINAPVFFLDDLPPHLDAVAEQARSVSLLHFIADKRLAALVGPAQNCHLHTSDWPDARAFIETKLDLLGF 875
R G Q P V +QL L LDP+RPLI++DADEV+ F+AG F+ NG + D SFA+TGN+R S A Q +V +LL FF+ + LDPV AAEAL AL RAQ+IVLSNVP + AARQR LR + MDYPL+AN+G+KG +R L EQ+ APV F+DD+P H +VA V LHF+AD RLA L+ PA++ H WP ARAFIE +L GF
Sbjct: 3 REGSSKRQPPPEVATQLAALELDPKRPLIISDADEVLFEFMAGFVAFIEENGCYFDWASFALTGNVRECESERALDQDEVHELLQAFFDDRADRLDPVPDAAEALAALAKRAQVIVLSNVPKDSIAARQRSLRNNNMDYPLIANSGTKGPAVRVLAEQVQAPVLFIDDIPHHHTSVARAVERVIRLHFVADPRLARLLEPAEDSHHRADTWPAARAFIEERLTEAGF 229
BLAST of mRNA_P-wetherbeei_contig16678.1.1 vs. uniprot
Match: A0A2E5BSK2_9HYPH (Uncharacterized protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BSK2_9HYPH) HSP 1 Score: 222 bits (565), Expect = 9.360e-69 Identity = 110/216 (50.93%), Postives = 152/216 (70.37%), Query Frame = 3
Query: 213 SQMEPHVRSQLEDLVLDPQRPLIVTDADEVVAYFIAGLERFLHRNGHWLDLKSFAITGNIRRQGSNEASTQAQVKDLLAEFFNTDTELLDPVDGAAEALQALNARAQIIVLSNVPPSAHAARQRWLRRHGMDYPLVANAGSKGLPLRYLEEQINAPVFFLDDLPPHLDAVAEQARSVSLLHFIADKRLAALVGPAQNCHLHTSDWPDARAFIETKL 860
+Q+ P V L L LDP RPLI++DADEV+ F+AG ER+L G W+DL+SFA++GNI+ + SN KDLL++FF +T L+ V+ AA+AL++L+ARAQIIVL+NVP R + L R GMDYP++AN G KG ++YL +++ APVFFLDD+P +L +VAE LHFIAD+RLA L+ P+++ H H+S WPDA+ FIE +L
Sbjct: 9 TQLHPEVEVALSQLDLDPSRPLIISDADEVLLQFMAGFERYLDGRGLWIDLQSFALSGNIKEKDSNTPFPVEDTKDLLSDFFIAETHKLEAVEHAADALKSLSARAQIIVLTNVPFEQRDTRAQSLARQGMDYPVIANTGLKGGAVKYLGDRVKAPVFFLDDIPHNLKSVAEAHEPSKRLHFIADRRLAKLLPPSKHSHFHSSHWPDAQQFIEQEL 224
BLAST of mRNA_P-wetherbeei_contig16678.1.1 vs. uniprot
Match: A0A2A5ET65_9HYPH (Uncharacterized protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5ET65_9HYPH) HSP 1 Score: 221 bits (563), Expect = 2.070e-68 Identity = 110/224 (49.11%), Postives = 154/224 (68.75%), Query Frame = 3
Query: 204 LELSQMEPHVRSQLEDLVLDPQRPLIVTDADEVVAYFIAGLERFLHRNGHWLDLKSFAITGNIRRQGSNEASTQAQVKDLLAEFFNTDTELLDPVDGAAEALQALNARAQIIVLSNVPPSAHAARQRWLRRHGMDYPLVANAGSKGLPLRYLEEQINAPVFFLDDLPPHLDAVAEQARSVSLLHFIADKRLAALVGPAQNCHLHTSDWPDARAFIETKLDLLGF 875
++ S ++P V L+ L LDP RPLI++DADEV+ F+AGLE +L R G WLDL+SFA++GNI+ + +N+ + DLLA+FF ++ L+ V+ AA AL+ L+ RAQII+L+N+P + AR L R GMDYP++AN G KG + YL +Q + P FFLDDLP ++ +VAE LHFIADKRLA L+ P+++ H H+S WPDA+ FIE +L GF
Sbjct: 9 MDRSALDPEVEKALKALDLDPARPLIISDADEVLLQFVAGLELYLDRQGLWLDLQSFALSGNIKEKVTNKPVPIERTPDLLADFFVSEAGKLEAVEHAASALKTLSGRAQIIILTNIPFAQRDARAESLARQGMDYPVIANKGLKGAAVHYLAKQTSGPTFFLDDLPHNIRSVAEAHEPSRRLHFIADKRLAKLLPPSEHSHFHSSHWPDAQTFIEEELSTSGF 232
BLAST of mRNA_P-wetherbeei_contig16678.1.1 vs. uniprot
Match: A0A2D4VID3_9HYPH (Uncharacterized protein n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VID3_9HYPH) HSP 1 Score: 220 bits (561), Expect = 3.530e-68 Identity = 111/215 (51.63%), Postives = 150/215 (69.77%), Query Frame = 3
Query: 231 VRSQLEDLVLDPQRPLIVTDADEVVAYFIAGLERFLHRNGHWLDLKSFAITGNIRRQGSNEASTQAQVKDLLAEFFNTDTELLDPVDGAAEALQALNARAQIIVLSNVPPSAHAARQRWLRRHGMDYPLVANAGSKGLPLRYLEEQINAPVFFLDDLPPHLDAVAEQARSVSLLHFIADKRLAALVGPAQNCHLHTSDWPDARAFIETKLDLLGF 875
V +QL +L L+ RPLIVTD DEV+ F+ GLER+L N W+DL+SFA++GNI+ + +NE ++ LL FF+T+T LD V+GAA+AL L+ RAQ++VLSN+P + R L G+DYP++AN G KG P+R L E + APVFFLDDLPP++ +VAE +HFIAD+RLA L+GPA++ H HT+DW A+AFIE KL GF
Sbjct: 13 VPAQLAELRLERGRPLIVTDCDEVLVEFLKGLERYLEANNLWIDLQSFALSGNIKHRDTNEPVPPKEMPALLERFFDTETHRLDAVEGAADALAELSKRAQVVVLSNLPLTQRRTRIDNLSAQGLDYPVIANQGLKGGPVRKLAELVEAPVFFLDDLPPNISSVAEAYEPSHRIHFIADERLAKLLGPAKDSHFHTTDWNAAKAFIEEKLAAEGF 227
BLAST of mRNA_P-wetherbeei_contig16678.1.1 vs. uniprot
Match: A7HWY7_PARL1 (Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HWY7_PARL1) HSP 1 Score: 220 bits (560), Expect = 1.110e-67 Identity = 116/212 (54.72%), Postives = 144/212 (67.92%), Query Frame = 3
Query: 240 QLEDLVLDPQRPLIVTDADEVVAYFIAGLERFLHRNGHWLDLKSFAITGNIRRQGSNEASTQAQVKDLLAEFFNTDTELLDPVDGAAEALQALNARAQIIVLSNVPPSAHAARQRWLRRHGMDYPLVANAGSKGLPLRYLEEQINAPVFFLDDLPPHLDAVAEQARSVSLLHFIADKRLAALVGPAQNCHLHTSDWPDARAFIETKLDLLGF 875
Q++ L L RPLIV+DADEV+ F+ GLER+L WLDLKSFA+TGNIR G+NE A + LL FF T LD V GAAEAL AL+ RAQI+VL+NVP + AAR L G+DYP++AN G KG +R + E++ APV FLDD+P +L +VA+ L+HFIAD RLA L+GPA++ H HT WPDARAFIE KL GF
Sbjct: 41 QIDALDLVRGRPLIVSDADEVLIQFVVGLERYLETQKLWLDLKSFALTGNIRHVGTNEPYDAAAMPALLEAFFEASTHALDIVPGAAEALAALSERAQIVVLTNVPLESRAARAASLAAQGIDYPVIANKGLKGGAVRRMAERVEAPVLFLDDIPHNLASVAKAHAPTHLIHFIADPRLAKLLGPAKDSHFHTGHWPDARAFIEQKLTEEGF 252
BLAST of mRNA_P-wetherbeei_contig16678.1.1 vs. uniprot
Match: A0A2Z4UIT7_9HYPH (Uncharacterized protein n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UIT7_9HYPH) HSP 1 Score: 217 bits (553), Expect = 5.350e-67 Identity = 108/221 (48.87%), Postives = 152/221 (68.78%), Query Frame = 3
Query: 213 SQMEPHVRSQLEDLVLDPQRPLIVTDADEVVAYFIAGLERFLHRNGHWLDLKSFAITGNIRRQGSNEASTQAQVKDLLAEFFNTDTELLDPVDGAAEALQALNARAQIIVLSNVPPSAHAARQRWLRRHGMDYPLVANAGSKGLPLRYLEEQINAPVFFLDDLPPHLDAVAEQARSVSLLHFIADKRLAALVGPAQNCHLHTSDWPDARAFIETKLDLLGF 875
++++ VR L L LDP RPLI++DADEV+ F+AGLER+L G WLDL++FA++GNI+R+ + + + DLL+ FF + L VD AA+AL L++RAQIIVL+NVP + AR L R GM+YP++AN G KG + ++ + APVFFLDD+P +L +VAE + LHFIADKRLA L+ P+++ H H+S WPDA+AF+E +L GF
Sbjct: 5 AELDADVRDALNTLHLDPARPLIISDADEVLLQFVAGLERYLDGQGMWLDLQTFALSGNIKRKDTGDPVPVEETPDLLSGFFKAEAGNLTAVDHAADALSTLSSRAQIIVLTNVPTAQRDARAESLARQGMNYPVIANKGLKGPAVSHIADAFTAPVFFLDDIPHNLKSVAESHKESRRLHFIADKRLAKLLPPSEHSHFHSSHWPDAQAFMEAELAAHGF 225
BLAST of mRNA_P-wetherbeei_contig16678.1.1 vs. uniprot
Match: A0A317E7I5_9PROT (Uncharacterized protein n=1 Tax=Zavarzinia aquatilis TaxID=2211142 RepID=A0A317E7I5_9PROT) HSP 1 Score: 216 bits (549), Expect = 2.080e-66 Identity = 107/212 (50.47%), Postives = 144/212 (67.92%), Query Frame = 3
Query: 240 QLEDLVLDPQRPLIVTDADEVVAYFIAGLERFLHRNGHWLDLKSFAITGNIRRQGSNEASTQAQVKDLLAEFFNTDTELLDPVDGAAEALQALNARAQIIVLSNVPPSAHAARQRWLRRHGMDYPLVANAGSKGLPLRYLEEQINAPVFFLDDLPPHLDAVAEQARSVSLLHFIADKRLAALVGPAQNCHLHTSDWPDARAFIETKLDLLGF 875
QLE LVL+ RPL++TDADEV+ F+ G E +L NGH+LDL SFA+ GNI+ + E + KDLL FF TE + PV GAA AL AL+ARAQ++VLSN+P S+ AR++ L GM YP+VAN G KG +R++ + + APVFFLDD+P + +VA+ A V +HF+AD RLA L+GPA++CH DW + R IE +L LG+
Sbjct: 13 QLEALVLEEGRPLVITDADEVLFLFLQGFEAYLEDNGHYLDLSSFALVGNIKNAATEEMAPVETAKDLLDGFFRERTETMTPVPGAAAALTALSARAQVVVLSNLPESSRGAREKALALAGMPYPIVANTGLKGPAVRHMADIVKAPVFFLDDIPHNHTSVAQAAPEVQRVHFVADPRLARLIGPAEHCHHRVDDWDEVRKLIEQELASLGW 224 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16678.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16678.1.1 >prot_P-wetherbeei_contig16678.1.1 ID=prot_P-wetherbeei_contig16678.1.1|Name=mRNA_P-wetherbeei_contig16678.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=220bp MEPHVRSQLEDLVLDPQRPLIVTDADEVVAYFIAGLERFLHRNGHWLDLKback to top mRNA from alignment at P-wetherbeei_contig16678:5..882+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16678.1.1 ID=mRNA_P-wetherbeei_contig16678.1.1|Name=mRNA_P-wetherbeei_contig16678.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=878bp|location=Sequence derived from alignment at P-wetherbeei_contig16678:5..882+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16678:5..882+ >mRNA_P-wetherbeei_contig16678.1.1 ID=mRNA_P-wetherbeei_contig16678.1.1|Name=mRNA_P-wetherbeei_contig16678.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=660bp|location=Sequence derived from alignment at P-wetherbeei_contig16678:5..882+ (Phaeothamnion wetherbeei SAG_119_79)back to top |