mRNA_P-wetherbeei_contig1662.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1662.3.1
Unique NamemRNA_P-wetherbeei_contig1662.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1662.3.1 vs. uniprot
Match: A0A536XKL8_9PROT (Rieske 2Fe-2S domain-containing protein n=8 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XKL8_9PROT)

HSP 1 Score: 774 bits (1999), Expect = 1.260e-280
Identity = 355/437 (81.24%), Postives = 396/437 (90.62%), Query Frame = 1
Query:    4 LMHDRNPPISKLVEPDRVHKSVYTDEQLFELEMERIHERVWVYCGHETQVKKPGDYYTVQIGRQPMVIVRGADGSVNVLYNRCPHRGVMLCGDRHGNTGDAFRCSYHAWTFHHDGKLKNIPMMESGYKGTRWNRDNPDINMKPAARVENYRGFVFASLAEEGPSLVEFLGPAKIAFDDICDRAPAGVVEVVPTCFRVIQNSNWKIFLENQLDALHPSVTHQSTGRAARDVEVELEKKTGHAPLAYHMLSAFSTVTIDKWDNFQTINYPYGHCILTGYMGLRPQDPDTLAYEKTLVKAYGEKKKEEILTTNIHHVLLYPGLSVQSPLQQLRAVRPLGVNKTLTEIWHFRLKGAPEPIYRRALAYYNLVNSPATLINADDLENFWKAQTGLASDGGEWVSFARHHGRDIEKNGALETAEGMGTSEAPMRNQMKAWAEFM 1314
            ++H+R P ++K VEPDRV + VYTD  +FE+EMERIHERVW+YCGHETQV K GDYYT QIGRQPM++VRG DG VNVLYNRCPHRG M+CGDR GN G+ FRCSYH+WTFHHDGKL+ IPMMESGY GTRW RDNPD NMK AARVENYRGFVFASLA +GP L+EFLG +KIAFDDICDR+P G VEVVP CFR+IQ+SNWKIFLENQLDALHPSVTHQSTGRAARDVE+E+EK+TG  PL+YHMLSAFSTVTI+KWDNFQT+NYPYGHCILTGYMGLRP+DPDTL YE+ L KAYGEK+KEEILTTNIHHVL+YPGLSVQSPLQQLRAVRPLGVN+TLTEIWHFRLKGAPEPIYRRALAYYNLVNSP+T+INADDLENFWKA  GL+SDGG+WVSF RH+GRD EK+G +ETA   GTSEAPMRNQMKAW ++M
Sbjct:   23 MLHERIPNLAKFVEPDRVRREVYTDAAIFEMEMERIHERVWIYCGHETQVPKAGDYYTTQIGRQPMLMVRGKDGKVNVLYNRCPHRGSMMCGDRSGNAGEFFRCSYHSWTFHHDGKLRAIPMMESGYAGTRWTRDNPDCNMKRAARVENYRGFVFASLAADGPGLLEFLGRSKIAFDDICDRSPEGEVEVVPNCFRMIQHSNWKIFLENQLDALHPSVTHQSTGRAARDVELEIEKRTGKIPLSYHMLSAFSTVTIEKWDNFQTLNYPYGHCILTGYMGLRPKDPDTLEYERVLAKAYGEKRKEEILTTNIHHVLIYPGLSVQSPLQQLRAVRPLGVNRTLTEIWHFRLKGAPEPIYRRALAYYNLVNSPSTMINADDLENFWKAHQGLSSDGGDWVSFHRHYGRDAEKDGMVETAPNCGTSEAPMRNQMKAWTQYM 459          
BLAST of mRNA_P-wetherbeei_contig1662.3.1 vs. uniprot
Match: A0A537C0B1_9PROT (Rieske 2Fe-2S domain-containing protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537C0B1_9PROT)

HSP 1 Score: 756 bits (1951), Expect = 1.770e-272
Identity = 343/438 (78.31%), Postives = 397/438 (90.64%), Query Frame = 1
Query:    1 TLMHDRNPPISKLVEPDRVHKSVYTDEQLFELEMERIHERVWVYCGHETQVKKPGDYYTVQIGRQPMVIVRGADGSVNVLYNRCPHRGVMLCGDRHGNTGDAFRCSYHAWTFHHDGKLKNIPMMESGYKGTRWNRDNPDINMKPAARVENYRGFVFASLAEEGPSLVEFLGPAKIAFDDICDRAPAGVVEVVPTCFRVIQNSNWKIFLENQLDALHPSVTHQSTGRAARDVEVELEKKTGHAPLAYHMLSAFSTVTIDKWDNFQTINYPYGHCILTGYMGLRPQDPDTLAYEKTLVKAYGEKKKEEILTTNIHHVLLYPGLSVQSPLQQLRAVRPLGVNKTLTEIWHFRLKGAPEPIYRRALAYYNLVNSPATLINADDLENFWKAQTGLASDGGEWVSFARHHGRDIEKNGALETAEGMGTSEAPMRNQMKAWAEFM 1314
            T++ +R   +SK VEPDRV + VYTD ++FELEM RIHE+VW+YCGHE+QV  PGDYY+VQ+GRQPM++VRGADG+++VLYNRCPHRG M+CGDRHGN G+ FRCSYHAWTF HDG+L++IPMMESGY GTR+ RDNPD +MK AARVE+YRGFVFASLA++GP+L EFLG +++AFDD+CDRAPAG V +VP CFRVIQ+SNWKIFLENQLDALHPSV HQSTGRAA +VE ++EK+TG APL+YHMLSAF+TVTIDKWDNFQT+NYPYGHCILTGYMGLRP+DPDTLAYEK + KAYG+K+ EEIL  NIHHVL+YPGLSVQSPLQQLRAVRPLGV++TLTEIWHFRLKGAPEPIYRR+LAYYNLVNSPATLINADDLENFWK   GLASDGG+WVSF RHHGRDIEK+G +ETA   GTSEAPMRNQMKAWA++M
Sbjct:   76 TMLQERILDLSKCVEPDRVRREVYTDPEIFELEMRRIHEQVWIYCGHESQVPNPGDYYSVQVGRQPMLMVRGADGTISVLYNRCPHRGNMMCGDRHGNAGEFFRCSYHAWTFQHDGRLRSIPMMESGYAGTRYGRDNPDCSMKRAARVESYRGFVFASLAKDGPTLAEFLGASRVAFDDMCDRAPAGEVAIVPNCFRVIQHSNWKIFLENQLDALHPSVVHQSTGRAAHEVEKQIEKRTGRAPLSYHMLSAFATVTIDKWDNFQTLNYPYGHCILTGYMGLRPKDPDTLAYEKVMQKAYGKKRTEEILAVNIHHVLIYPGLSVQSPLQQLRAVRPLGVDRTLTEIWHFRLKGAPEPIYRRSLAYYNLVNSPATLINADDLENFWKCHQGLASDGGDWVSFGRHHGRDIEKDGRVETAANCGTSEAPMRNQMKAWAQYM 513          
BLAST of mRNA_P-wetherbeei_contig1662.3.1 vs. uniprot
Match: A0A1F4CWL2_9PROT (Rieske domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CWL2_9PROT)

HSP 1 Score: 748 bits (1930), Expect = 1.790e-270
Identity = 342/439 (77.90%), Postives = 393/439 (89.52%), Query Frame = 1
Query:    4 LMHDRNPPISKLVEPDRVHKSVYTDEQLFELEMERIHERVWVYCGHETQVKKPGDYYTVQIGRQPMVIVRGADGSVNVLYNRCPHRGVMLCGDRHGNTGDAFRCSYHAWTFHHDGKLKNIPMMESGYKGTRWNRDNPDINMKPAARVENYRGFVFASLAEEGPSLVEFLGPAKIAFDDICDRAPAGVVEVVPTCFRVIQNSNWKIFLENQLDALHPSVTHQSTGRAARDVEVELEKKTGHAPLAYHMLSAFSTVTIDKWDNFQTINYPYGHCILTGYMGLRPQDPDTLAYEKTLVKAYGEKKKEEILTTNIHHVLLYPGLSVQSPLQQLRAVRPLGVNKTLTEIWHFRLKGAPEPIYRRALAYYNLVNSPATLINADDLENFWKAQTGLASDGGEWVSFARHHGRDIEKNGALETAEGMGTSEAPMRNQMKAWAEFMAN 1320
            ++ +R P  SK VEPDRV K VYTD  +FE EMERIHE +W+YCGHE+QV K GDYY VQ+GRQPM++VRG +G V+VLYNRCPHRG M+CGDRHGNTG+ FRCSYHAWTFHHDG+L+NIPMMESGY+GTR+ RDNP+ +MK AARVE+YRGFVFASLA++GP+L EFLG + +AFDD+CDRAP G VE+VP CFR+IQ+SNWKIFLENQLDALHPSVTHQSTGRAA +VE  +EKKTG APL+YHMLSAF+TVTIDKWDNFQTIN+P GHCILTGYMGLRP+DPDTL YEKTL+KAYG+K+ EEIL  NIHHVL+YPGLSVQSPLQQLRAVRPLGV++TLTEIWHFRLKGAPE IYRR+LAYYNLVNSPAT++NADDLENFWK   GL+SDGG+WVSFARH GRDIEK+G +E+  GMGTSEAPMRNQMKAWA +M N
Sbjct:    1 MLQERIPDFSKFVEPDRVRKEVYTDAGVFEREMERIHETLWIYCGHESQVPKAGDYYAVQLGRQPMLMVRGPEGKVHVLYNRCPHRGNMMCGDRHGNTGEFFRCSYHAWTFHHDGRLRNIPMMESGYQGTRYGRDNPECSMKRAARVESYRGFVFASLAKDGPTLKEFLGASLVAFDDMCDRAPEGEVEIVPNCFRIIQHSNWKIFLENQLDALHPSVTHQSTGRAAHEVEKMIEKKTGKAPLSYHMLSAFATVTIDKWDNFQTINHPQGHCILTGYMGLRPKDPDTLKYEKTLIKAYGQKRMEEILGVNIHHVLIYPGLSVQSPLQQLRAVRPLGVDRTLTEIWHFRLKGAPEAIYRRSLAYYNLVNSPATVVNADDLENFWKCHQGLSSDGGDWVSFARHFGRDIEKDGVVESGPGMGTSEAPMRNQMKAWARYMGN 439          
BLAST of mRNA_P-wetherbeei_contig1662.3.1 vs. uniprot
Match: A0A1F4EZD5_9PROT (Rieske domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4EZD5_9PROT)

HSP 1 Score: 741 bits (1914), Expect = 4.880e-268
Identity = 338/439 (76.99%), Postives = 395/439 (89.98%), Query Frame = 1
Query:    4 LMHDRNPPISKLVEPDRVHKSVYTDEQLFELEMERIHERVWVYCGHETQVKKPGDYYTVQIGRQPMVIVRGADGSVNVLYNRCPHRGVMLCGDRHGNTGDAFRCSYHAWTFHHDGKLKNIPMMESGYKGTRWNRDNPDINMKPAARVENYRGFVFASLAEEGPSLVEFLGPAKIAFDDICDRAPAGVVEVVPTCFRVIQNSNWKIFLENQLDALHPSVTHQSTGRAARDVEVELEKKTGHAPLAYHMLSAFSTVTIDKWDNFQTINYPYGHCILTGYMGLRPQDPDTLAYEKTLVKAYGEKKKEEILTTNIHHVLLYPGLSVQSPLQQLRAVRPLGVNKTLTEIWHFRLKGAPEPIYRRALAYYNLVNSPATLINADDLENFWKAQTGLASDGGEWVSFARHHGRDIEKNGALETAEGMGTSEAPMRNQMKAWAEFMAN 1320
            ++ +R P +SK VE DRV + VYTD  +FELEM+RIHERVW+YCGH++QV K GDYYT+QIGRQPMV+VRG DGSVNVLYNRCPHRG ++ GDR+GN G+ FRCSYHAWTF HDG+L++IPMMESGY GT + +++PD +MK AARVENYRGFVFASLA++GP+L EFLG +++AFDD+CDRAP G VE+VP CFRVIQ SNWKIFLENQLDALHPSVTHQSTGRAA +VE E+E+KTG APL+YHMLSAF+TVTIDKWDNFQT+NYP+GHCILTGYMGLRP+DPDTLAYE+TL KAYG+++ E+IL  NIHHVL+YPGLSVQSPLQQLRAVRPLGV++TLTEIWHFRLKGAPEPIYRR+LAYYNLVNSPATL+NADDLENFWK   GL+S+GG+WVSFARH+GRD+EKNG +ETA   GTSEAPMRNQMKAWA +M N
Sbjct:    1 MLQERIPDLSKYVEADRVRREVYTDPGIFELEMQRIHERVWIYCGHDSQVPKTGDYYTLQIGRQPMVMVRGNDGSVNVLYNRCPHRGNLMVGDRYGNAGEFFRCSYHAWTFQHDGRLRSIPMMESGYAGTPYGKEHPDCSMKRAARVENYRGFVFASLAKDGPTLKEFLGESRVAFDDMCDRAPQGEVEIVPNCFRVIQKSNWKIFLENQLDALHPSVTHQSTGRAAHEVEKEIERKTGQAPLSYHMLSAFATVTIDKWDNFQTLNYPHGHCILTGYMGLRPRDPDTLAYEETLTKAYGKERMEQILGVNIHHVLIYPGLSVQSPLQQLRAVRPLGVDRTLTEIWHFRLKGAPEPIYRRSLAYYNLVNSPATLVNADDLENFWKCHQGLSSEGGDWVSFARHYGRDLEKNGVVETAPNCGTSEAPMRNQMKAWARYMGN 439          
BLAST of mRNA_P-wetherbeei_contig1662.3.1 vs. uniprot
Match: A0A521YGX3_9PROT (Ribosomal subunit interface protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YGX3_9PROT)

HSP 1 Score: 740 bits (1911), Expect = 1.400e-267
Identity = 341/439 (77.68%), Postives = 393/439 (89.52%), Query Frame = 1
Query:    4 LMHDRNPPISKLVEPDRVHKSVYTDEQLFELEMERIHERVWVYCGHETQVKKPGDYYTVQIGRQPMVIVRGADGSVNVLYNRCPHRGVMLCGDRHGNTGDAFRCSYHAWTFHHDGKLKNIPMMESGYKGTRWNRDNPDINMKPAARVENYRGFVFASLAEEGPSLVEFLGPAKIAFDDICDRAPAGVVEVVPTCFRVIQNSNWKIFLENQLDALHPSVTHQSTGRAARDVEVELEKKT--GHAPLAYHMLSAFSTVTIDKWDNFQTINYPYGHCILTGYMGLRPQDPDTLAYEKTLVKAYGEKKKEEILTTNIHHVLLYPGLSVQSPLQQLRAVRPLGVNKTLTEIWHFRLKGAPEPIYRRALAYYNLVNSPATLINADDLENFWKAQTGLASDGGEWVSFARHHGRDIEKNGALETAEGMGTSEAPMRNQMKAWAEFM 1314
            ++ +R P ++K VEPDRV + VYTD  +FELEM+RIHERVW+YCGHE+QV K GDYY VQIGRQPM++VRG+DG V+VLYNRCPHRG M+CGDR GN G+ FRCSYHAWTF HDGKL++IPMM+SGY GT  N+++P++ MKPA RVENYRGFVF+SLA++GPSL EFLG A +AFDD+CDRAP G VE+VP CFRVIQ+SNWKIFLENQLDALHPSVTHQSTGRAA +VE E+ KKT  G APL+YHMLSAF+TVTIDKWDNFQT+NYPYGHCILTGYMGLRPQDPDTLAY+K ++KAYG K+ EEI++ NIHHVL+YPGLSVQSPLQQLRAVRPLGV++TLTEIWHFRLKGAPEPIYRR+LAYYNLVNSPATL+NADDLENFWK   GL+SDGG+WVSFARH GRDIEK+G +ETA   GTSEAPMRNQMKAWAE+M
Sbjct:    1 MLQERIPDLTKYVEPDRVRREVYTDPGIFELEMQRIHERVWIYCGHESQVPKAGDYYAVQIGRQPMLMVRGSDGKVHVLYNRCPHRGNMMCGDRKGNAGEFFRCSYHAWTFQHDGKLRSIPMMDSGYAGTPLNKESPELCMKPAPRVENYRGFVFSSLAKDGPSLKEFLGKAIVAFDDMCDRAPEGEVEIVPNCFRVIQHSNWKIFLENQLDALHPSVTHQSTGRAAHEVEKEIAKKTKKGEAPLSYHMLSAFATVTIDKWDNFQTLNYPYGHCILTGYMGLRPQDPDTLAYDKVMIKAYGRKRFEEIVSVNIHHVLIYPGLSVQSPLQQLRAVRPLGVDRTLTEIWHFRLKGAPEPIYRRSLAYYNLVNSPATLVNADDLENFWKCHQGLSSDGGDWVSFARHFGRDIEKDGMVETAPNCGTSEAPMRNQMKAWAEYM 439          
BLAST of mRNA_P-wetherbeei_contig1662.3.1 vs. uniprot
Match: A0A177QSK3_9PROT (Rieske domain-containing protein n=1 Tax=Betaproteobacteria bacterium SCGC AG-212-J23 TaxID=1799662 RepID=A0A177QSK3_9PROT)

HSP 1 Score: 717 bits (1850), Expect = 2.820e-258
Identity = 332/430 (77.21%), Postives = 379/430 (88.14%), Query Frame = 1
Query:   31 SKLVEPDRVHKSVYTDEQLFELEMERIHERVWVYCGHETQVKKPGDYYTVQIGRQPMVIVRGADGSVNVLYNRCPHRGVMLCGDRHGNTGDAFRCSYHAWTFHHDGKLKNIPMMESGYKGTRWNRDNPDINMKPAARVENYRGFVFASLAEEGPSLVEFLGPAKIAFDDICDRAPAGVVEVVPTCFRVIQNSNWKIFLENQLDALHPSVTHQSTGRAARDVEVELEKKT--GHAPLAYHMLSAFSTVTIDKWDNFQTINYPYGHCILTGYMGLRPQDPDTLAYEKTLVKAYGEKKKEEILTTNIHHVLLYPGLSVQSPLQQLRAVRPLGVNKTLTEIWHFRLKGAPEPIYRRALAYYNLVNSPATLINADDLENFWKAQTGLASDGGEWVSFARHHGRDIEKNGALETAEGMGTSEAPMRNQMKAWAEFM 1314
            S++VEPDRV +  YTD  +F+LEM+RIHE VW+YCGHE+QV K GDYYT+QIGRQPM++VRG D  V+VLYNRCPHRG M+CGDRHGNTG+ FRCSYHAW FHHDG LKNIPMM+SGY GTR N+ +P++NMKPAARVE+YRGFVFASLA  GP L EFLG + +AFDD+CDRAP G VEVVP CFRVIQ+SNWK+F+ENQ+DALHPSVTHQSTGRAA +VE +L KK   G A L+YHMLSAF+TVTIDKWDNFQTINYPYGHCILTGYMGLRPQDPDT AY+K ++KAYG+K+ EEI+  NIHHVL+YPGLSVQSPLQQLRAVRPLGV++TLTEIWHFRLKGAPE IYRR+LAYYNLVNSPATLINADDLENFWK   GL+SDGG+WVSFARHHG DIEK G + +A   GTSEAPMRNQMKAWA++M
Sbjct:   12 SRIVEPDRVRREAYTDPAIFDLEMQRIHETVWIYCGHESQVPKAGDYYTMQIGRQPMIMVRGKDRKVHVLYNRCPHRGNMMCGDRHGNTGEQFRCSYHAWQFHHDGTLKNIPMMDSGYAGTRVNKGSPELNMKPAARVESYRGFVFASLASSGPGLKEFLGKSIVAFDDMCDRAPEGEVEVVPNCFRVIQHSNWKLFMENQIDALHPSVTHQSTGRAAHEVEKQLAKKAKAGEA-LSYHMLSAFATVTIDKWDNFQTINYPYGHCILTGYMGLRPQDPDTKAYDKIMIKAYGQKRFEEIVGVNIHHVLVYPGLSVQSPLQQLRAVRPLGVDRTLTEIWHFRLKGAPEAIYRRSLAYYNLVNSPATLINADDLENFWKCHQGLSSDGGDWVSFARHHGHDIEKPGEVSSAPNQGTSEAPMRNQMKAWAKYM 440          
BLAST of mRNA_P-wetherbeei_contig1662.3.1 vs. uniprot
Match: A0A1H8QLG4_9PROT (Phenylpropionate dioxygenase, large terminal subunit n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8QLG4_9PROT)

HSP 1 Score: 633 bits (1632), Expect = 3.550e-225
Identity = 304/432 (70.37%), Postives = 354/432 (81.94%), Query Frame = 1
Query:   28 ISKLVEPDRVHKSVYTDEQLFELEMERIHERVWVYCGHETQVKKPGDYYTVQIGRQPMVIVRGADGSVNVLYNRCPHRGVMLCGDRHGNTGDAFRCSYHAWTFHHDGKLKNIPMMESGYKGTRWNRDNPDINMKPAARVENYRGFVFASLAEEGPSLVEFLGPAKIAFDDICDRAPAGVVEVVPTCFRVIQNSNWKIFLENQLDALHPSVTHQSTGRAARDVEVELEKKTGHAPLAYHMLSAFSTVTIDKWDNFQTINYPYGHCILTGYMGLRPQDPDTLAYEKTLVKAYGEKKKEEILTTNIHHVLLYPGLSVQSPLQQLRAVRPLGVNKTLTEIWHFRLKGAPEPIYRRALAYYNLVNSPATLINADDLENFWKAQTGLASDGGEWVSFARHHGRDIEKNGALETAEGMGTSEAPMRNQMKAWAEFMANA 1323
            ++K VEPDRVH+SVY+D  +FELEME I  +VW Y GHE+QV   GDY+TVQIGRQPM++VR +D SV VLYNRCPHRG ML GDR GN G    CSYH+W F  DGK K IP+ + GY+GTR    +P  N+K AARV++YRGFVFASLA +GPSLVE+LGPA+IAFDD+CDRAP G VEVVPTCFRV+Q SNWKIFLENQLDALHP+VTH+STGRAA +VE  ++KK G APL+YH LSAF+T  I KWD FQTI Y +GHCILTGYMGLRP+DPDTLAYEK + KAYG+++ EEIL  NIHHVLLYPGLSVQSPLQQLRAVRPLGV+KTLTEIWHFRLKGAPE IYRRAL YYNLVNSP+TL+NADDL NFWK+  GL S GG+WVSF R+ G+D+E +    T   +GTSE PMRNQ KAW ++M+ A
Sbjct:    9 VAKAVEPDRVHRSVYSDPAIFELEMEHIFNKVWTYVGHESQVPAVGDYWTVQIGRQPMIMVRHSDRSVRVLYNRCPHRGTMLYGDRCGNVGKGIICSYHSWQFDTDGKCKAIPL-DKGYQGTRLTPGDPSCNVKTAARVDSYRGFVFASLAADGPSLVEWLGPARIAFDDMCDRAPEGEVEVVPTCFRVVQQSNWKIFLENQLDALHPAVTHESTGRAAGEVEAAIKKKGGSAPLSYHFLSAFAT-PISKWDQFQTIGYRHGHCILTGYMGLRPRDPDTLAYEKVMQKAYGKQRMEEILGVNIHHVLLYPGLSVQSPLQQLRAVRPLGVDKTLTEIWHFRLKGAPEAIYRRALGYYNLVNSPSTLVNADDLWNFWKSHKGLESQGGDWVSFHRNAGQDLETDDV--TTSVIGTSEQPMRNQFKAWTQYMSGA 436          
BLAST of mRNA_P-wetherbeei_contig1662.3.1 vs. uniprot
Match: A0A5C8P8Z2_9HYPH (Rieske 2Fe-2S domain-containing protein n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A5C8P8Z2_9HYPH)

HSP 1 Score: 632 bits (1631), Expect = 4.860e-225
Identity = 300/432 (69.44%), Postives = 356/432 (82.41%), Query Frame = 1
Query:   28 ISKLVEPDRVHKSVYTDEQLFELEMERIHERVWVYCGHETQVKKPGDYYTVQIGRQPMVIVRGADGSVNVLYNRCPHRGVMLCGDRHGNTGDAFRCSYHAWTFHHDGKLKNIPMMESGYKGTRWNRDNPDIN---MKPAARVENYRGFVFASLAEEGPSLVEFLGPAKIAFDDICDRAPAGVVEVVPTCFRVIQNSNWKIFLENQLDALHPSVTHQSTGRAARDVEVELEKKTGHAPLAYHMLSAFSTVTIDKWDNFQTINYPYGHCILTGYMGLRPQDPDTLAYEKTLVKAYGEKKKEEILTTNIHHVLLYPGLSVQSPLQQLRAVRPLGVNKTLTEIWHFRLKGAPEPIYRRALAYYNLVNSPATLINADDLENFWKAQTGLASDGGEWVSFARHHGRDIEKNGALETAEGMGTSEAPMRNQMKAWAEFM 1314
            + + VE DRVH+ VYTD  +FE EM+RI  RVW Y GHE+QV+KPGDY+TVQ+GRQPM+++R  DG+++VL+NRCPHRG ML G+R GN G    CSYHAW F  DG  + +P+ + GY GTR      D +   MK AARVE+YRGFVFA+LA +GPSL E+LG A+IAFDD+CDRAPAG VE+VP CFRVIQNSNWKIFLENQLDALHP+VTH+STG+AA DVE E++K+ GHAPL+YH +SAF T  I KWD FQT+NYP+GHCILTGYMGLRP+DPDTLAYE+ + +AYGEK+ EEIL  NIHHVLLYPGLSVQSPLQQLRAVRPLGV+KTLTEIWHFRLKGAPE +YRRAL YYNLVNSPATLINADDL NFWK   GLASDGGEWVSF R+ G+D+E+ G + +   +GTSEAPMRNQ +AW ++M
Sbjct:    5 LRQAVEADRVHRHVYTDPGIFEQEMDRIFHRVWTYVGHESQVRKPGDYWTVQVGRQPMIMIRHRDGTIHVLHNRCPHRGAMLFGNRSGNAGPTITCSYHAWQFDTDGACRMVPLSK-GYDGTRLAPGGADCHLRDMKRAARVESYRGFVFANLAADGPSLREWLGDARIAFDDMCDRAPAGEVEIVPNCFRVIQNSNWKIFLENQLDALHPAVTHESTGKAAFDVEEEMKKRGGHAPLSYHYMSAFYTTPIAKWDQFQTLNYPHGHCILTGYMGLRPRDPDTLAYEEAMKQAYGEKRMEEILGVNIHHVLLYPGLSVQSPLQQLRAVRPLGVDKTLTEIWHFRLKGAPEAMYRRALGYYNLVNSPATLINADDLWNFWKIHQGLASDGGEWVSFHRNAGQDLEEGGVVTSC--IGTSEAPMRNQFRAWVDYM 433          
BLAST of mRNA_P-wetherbeei_contig1662.3.1 vs. uniprot
Match: A0A538QWA7_9DELT (Rieske 2Fe-2S domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A538QWA7_9DELT)

HSP 1 Score: 600 bits (1546), Expect = 3.430e-212
Identity = 286/432 (66.20%), Postives = 350/432 (81.02%), Query Frame = 1
Query:   28 ISKLVEPDRVHKSVYTDEQLFELEMERIHERVWVYCGHETQVKKPGDYYTVQIGRQPMVIVRGADGSVNVLYNRCPHRGVMLCGDRHGNTGDAFRCSYHAWTFHHDGKLKNIPMMESGYKGTRWNRDNPDINMKPAARVENYRGFVFASLAEEGPSLVEFLGPAKIAFDDICDRAPAGVVEVVPTCFRVIQNSNWKIFLENQLDALHPSVTHQSTGRAARDVEVELEKKTGHAPLAYHMLSAFSTVTIDKWDNFQTINYPYGHCILTGYMGLRPQDPDTLAYEKTLVKAYGEKKKEEILTTNIHHVLLYPGLSVQSPLQQLRAVRPLGVNKTLTEIWHFRLKGAPEPIYRRALAYYNLVNSPATLINADDLENFWKAQTGLASDGGEWVSFARHHGRDIEKNGALETAEGMGTSEAPMRNQMKAWAEFMANA 1323
            +S+LVEPDRVH+ VYTD+++F+ EM +I ERVWVYCGHETQV +PGDY+  QIGRQPM +VRG D  + VL+NRCPHRGV LCG++ GN G A  CSYHAW+FH DG+L++IP+ + GY GTR + +NPD ++KPAARV++YRGFVFASL+  GPSL EFLG AK+AFDD+CDR+P G VEVVP C RVIQ SNWK+F+ENQLDALHPSVTHQSTG AA  VE +++ +TG APL YH LSAF++   ++WD  QTIN+P GH IL  YMGLRPQDPDT A+E  LVKAYG +K EE L+  IHHVL+YP LSVQSPLQQLR +RPLG  +TL+EIWHFRLKGAPE IYRR+L YYNLVNSPAT++NADDLEN+ KAQ GL S+GG+WVSF R++G D E  G + +  G  TSEA MRNQ +AW+++M +A
Sbjct:    3 VSQLVEPDRVHRRVYTDQEIFDREMTQIFERVWVYCGHETQVPQPGDYHAFQIGRQPMFMVRGKDHQIRVLHNRCPHRGVQLCGNQRGNVGSALVCSYHAWSFHLDGRLRSIPL-QHGYDGTRVSAENPDCSVKPAARVDSYRGFVFASLSPTGPSLGEFLGEAKVAFDDMCDRSPLGEVEVVPICHRVIQQSNWKLFMENQLDALHPSVTHQSTGVAASRVERKIKDQTGAAPLYYHYLSAFAS-KFEQWDAVQTINFPRGHGILKAYMGLRPQDPDTRAHEDLLVKAYGAEKTEEYLSRGIHHVLVYPYLSVQSPLQQLRCLRPLGPGRTLSEIWHFRLKGAPEAIYRRSLWYYNLVNSPATMVNADDLENWTKAQWGLESEGGDWVSFHRNYGGDTENGGVIYSNNG--TSEAVMRNQFRAWSQYMTDA 430          
BLAST of mRNA_P-wetherbeei_contig1662.3.1 vs. uniprot
Match: A0A315DF29_9BURK (Rieske domain-containing protein n=9 Tax=Comamonadaceae TaxID=80864 RepID=A0A315DF29_9BURK)

HSP 1 Score: 596 bits (1537), Expect = 2.640e-210
Identity = 284/432 (65.74%), Postives = 347/432 (80.32%), Query Frame = 1
Query:   28 ISKLVEPDRVHKSVYTDEQLFELEMERIHERVWVYCGHETQVKKPGDYYTVQIGRQPMVIVRGADGSVNVLYNRCPHRGVMLCGDRHGNTGDAFRCSYHAWTFHHDGKLKNIPMMESGYKGTRWNRDNPDINMKPAARVENYRGFVFASLAEEGPSLVEFLGPAKIAFDDICDRAPAGVVEVVPTCFRVIQNSNWKIFLENQLDALHPSVTHQSTGRAARDVEVELEKKTGHAPLAYHMLSAFSTVTIDKWDNFQTINYPYGHCILTGYMGLRPQDPDTLAYEKTLVKAYGEKKKEEILTTNIHHVLLYPGLSVQSPLQQLRAVRPLGVNKTLTEIWHFRLKGAPEPIYRRALAYYNLVNSPATLINADDLENFWKAQTGLASDGGEWVSFARHHGRDIEKNGALETAEGMGTSEAPMRNQMKAWAEFMANA 1323
            ++ LV+PDRVHKSVYTD+ LF+LEM  I E+ WVYCGHE+QVK+ GDY+T+QIGRQPMV+VR  DGSV VLYNRCPHRGV LCG++ GNTG  F CSYHAW+FH +GK+K IP+++ GY GTR + D+ D +M PAARV++YRGFVFASL++EGPSL++FLG AKIAFDD+CDR+P G VE VP C RV+Q+SNWK F+ENQLDALHPSVTHQSTG +AR VE  L+K  G APL +H LS F++ + D+WD+ QT+N+ YGH IL  YMGLRP DPDT+ YE  + +AYGE+K EE L  +IHHVL+YP LSVQSPLQQLR +RP+  NKTL+EIWHFRLKG PE IY R+L Y+NLVNSPAT+INADDLEN+ K Q GL S+GGEWVSF R++G D EK+G L +  G  TSE  MRNQ KAW  ++  A
Sbjct:   30 LANLVQPDRVHKSVYTDQALFDLEMAHIFEKAWVYCGHESQVKEVGDYFTMQIGRQPMVMVRDTDGSVRVLYNRCPHRGVELCGNQSGNTGKGFVCSYHAWSFHLNGKVKAIPLVK-GYDGTRMHTDDADCSMVPAARVDSYRGFVFASLSKEGPSLIDFLGEAKIAFDDMCDRSPVGEVEAVPVCHRVVQHSNWKFFMENQLDALHPSVTHQSTGVSARRVEQRLKKDQGSAPLFFHYLSTFAS-SFDQWDSVQTVNFKYGHGILKAYMGLRPTDPDTVEYEALIKQAYGEEKGEEYLARSIHHVLIYPYLSVQSPLQQLRCLRPIAPNKTLSEIWHFRLKGVPEAIYERSLWYFNLVNSPATMINADDLENWTKGQLGLESNGGEWVSFHRNYGGDTEKDGVLYSNNG--TSEVVMRNQFKAWESYIRAA 457          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1662.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A536XKL8_9PROT1.260e-28081.24Rieske 2Fe-2S domain-containing protein n=8 Tax=Be... [more]
A0A537C0B1_9PROT1.770e-27278.31Rieske 2Fe-2S domain-containing protein n=2 Tax=Be... [more]
A0A1F4CWL2_9PROT1.790e-27077.90Rieske domain-containing protein n=1 Tax=Betaprote... [more]
A0A1F4EZD5_9PROT4.880e-26876.99Rieske domain-containing protein n=1 Tax=Betaprote... [more]
A0A521YGX3_9PROT1.400e-26777.68Ribosomal subunit interface protein n=1 Tax=Betapr... [more]
A0A177QSK3_9PROT2.820e-25877.21Rieske domain-containing protein n=1 Tax=Betaprote... [more]
A0A1H8QLG4_9PROT3.550e-22570.37Phenylpropionate dioxygenase, large terminal subun... [more]
A0A5C8P8Z2_9HYPH4.860e-22569.44Rieske 2Fe-2S domain-containing protein n=3 Tax=Hy... [more]
A0A538QWA7_9DELT3.430e-21266.20Rieske 2Fe-2S domain-containing protein n=1 Tax=De... [more]
A0A315DF29_9BURK2.640e-21065.74Rieske domain-containing protein n=9 Tax=Comamonad... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1662contigP-wetherbeei_contig1662:2058..3383 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog392499.Swit_1874
PFAMsRieske,Ring_hydroxyl_A
Model size1326
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00098,RC00270,RC01378,RC01450,RC01910
KEGG koko:K00479,ko:K05549,ko:K05708
KEGG ReactionR05290,R05291,R05428,R05621,R05622,R05665,R06782,R06783,R08100,R08101,R08108,R08109,R08110
KEGG Pathwayko00360,ko00362,ko00364,ko00622,ko01100,ko01120,ko01220,map00360,map00362,map00364,map00622,map01100,map01120,map01220
KEGG ModuleM00545,M00551
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.02e-130
EggNOG OGsCOG4638@1|root,COG4638@2|Bacteria,1N6MJ@1224|Proteobacteria,2TVEE@28211|Alphaproteobacteria
EC1.14.12.10,1.14.12.19
DescriptionCOG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Cds size1320
COG categoryP
BRITEbr01602,ko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186092.2694514-CDS-P-wetherbeei_contig1662:2057..33771683186092.2694514-CDS-P-wetherbeei_contig1662:2057..3377Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1662 2058..3377 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186092.2785861-UTR-P-wetherbeei_contig1662:3377..33831683186092.2785861-UTR-P-wetherbeei_contig1662:3377..3383Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1662 3378..3383 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1662.3.1prot_P-wetherbeei_contig1662.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1662 2058..3377 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1662.3.1

>prot_P-wetherbeei_contig1662.3.1 ID=prot_P-wetherbeei_contig1662.3.1|Name=mRNA_P-wetherbeei_contig1662.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=440bp
MHDRNPPISKLVEPDRVHKSVYTDEQLFELEMERIHERVWVYCGHETQVK
KPGDYYTVQIGRQPMVIVRGADGSVNVLYNRCPHRGVMLCGDRHGNTGDA
FRCSYHAWTFHHDGKLKNIPMMESGYKGTRWNRDNPDINMKPAARVENYR
GFVFASLAEEGPSLVEFLGPAKIAFDDICDRAPAGVVEVVPTCFRVIQNS
NWKIFLENQLDALHPSVTHQSTGRAARDVEVELEKKTGHAPLAYHMLSAF
STVTIDKWDNFQTINYPYGHCILTGYMGLRPQDPDTLAYEKTLVKAYGEK
KKEEILTTNIHHVLLYPGLSVQSPLQQLRAVRPLGVNKTLTEIWHFRLKG
APEPIYRRALAYYNLVNSPATLINADDLENFWKAQTGLASDGGEWVSFAR
HHGRDIEKNGALETAEGMGTSEAPMRNQMKAWAEFMANA*
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mRNA from alignment at P-wetherbeei_contig1662:2058..3383-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1662.3.1 ID=mRNA_P-wetherbeei_contig1662.3.1|Name=mRNA_P-wetherbeei_contig1662.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1326bp|location=Sequence derived from alignment at P-wetherbeei_contig1662:2058..3383- (Phaeothamnion wetherbeei SAG_119_79)
ACCCTGATGCACGATCGCAATCCGCCCATTTCCAAGCTGGTCGAGCCCGA CCGCGTGCACAAGTCGGTCTACACCGACGAGCAGTTGTTCGAGCTCGAGA TGGAGCGCATCCACGAGCGCGTCTGGGTCTATTGCGGCCACGAGACGCAG GTGAAGAAGCCCGGCGATTACTACACCGTCCAGATCGGCCGCCAGCCCAT GGTCATCGTGAGGGGCGCCGACGGCAGCGTGAACGTCCTCTACAACCGCT GCCCGCACCGCGGCGTGATGCTCTGCGGCGACCGGCACGGCAACACCGGC GACGCCTTCCGTTGCTCGTACCACGCGTGGACCTTCCACCACGACGGCAA GCTGAAGAACATCCCGATGATGGAATCGGGCTACAAGGGCACCCGCTGGA ACCGCGACAATCCCGACATCAACATGAAACCGGCCGCCCGGGTCGAGAAC TACCGCGGCTTCGTGTTCGCCAGCCTCGCCGAGGAAGGCCCGTCGCTCGT GGAGTTCCTCGGGCCGGCGAAGATCGCCTTCGACGACATCTGCGACCGCG CGCCGGCGGGCGTGGTCGAGGTCGTGCCCACGTGCTTCCGGGTCATCCAG AATTCCAACTGGAAGATCTTCCTCGAGAACCAGCTCGACGCGCTGCACCC GTCGGTCACGCACCAGTCCACCGGGCGCGCCGCGCGCGACGTCGAGGTCG AGCTCGAGAAGAAGACCGGGCATGCGCCGCTCGCCTACCACATGCTGTCG GCCTTCTCGACCGTGACGATCGACAAGTGGGACAACTTCCAGACGATCAA CTACCCGTACGGCCACTGCATCCTGACCGGCTACATGGGCCTGCGCCCGC AGGACCCGGACACGCTGGCCTACGAGAAGACGCTGGTGAAGGCCTATGGC GAGAAGAAGAAGGAGGAGATCCTGACGACCAACATCCACCACGTCCTGCT CTACCCGGGGCTGTCGGTGCAGTCGCCGCTGCAGCAGCTGCGCGCGGTGC GGCCGCTGGGCGTCAACAAGACGCTGACCGAGATCTGGCACTTCCGCCTG AAGGGCGCGCCCGAGCCGATCTACCGCCGGGCGCTGGCGTACTACAACCT GGTCAACTCCCCCGCCACGCTGATCAACGCGGACGACCTCGAGAATTTCT GGAAAGCCCAGACGGGCCTCGCATCGGACGGCGGCGAATGGGTGAGTTTC GCGCGGCACCACGGCCGCGACATCGAGAAGAACGGCGCGCTCGAGACGGC CGAGGGCATGGGCACGTCGGAGGCACCGATGCGCAACCAGATGAAGGCGT GGGCCGAATTCATGGCGAACGCATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1662:2058..3383-

>mRNA_P-wetherbeei_contig1662.3.1 ID=mRNA_P-wetherbeei_contig1662.3.1|Name=mRNA_P-wetherbeei_contig1662.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1320bp|location=Sequence derived from alignment at P-wetherbeei_contig1662:2058..3383- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACGATCGCAATCCGCCCATTTCCAAGCTGGTCGAGCCCGACCGCGT
GCACAAGTCGGTCTACACCGACGAGCAGTTGTTCGAGCTCGAGATGGAGC
GCATCCACGAGCGCGTCTGGGTCTATTGCGGCCACGAGACGCAGGTGAAG
AAGCCCGGCGATTACTACACCGTCCAGATCGGCCGCCAGCCCATGGTCAT
CGTGAGGGGCGCCGACGGCAGCGTGAACGTCCTCTACAACCGCTGCCCGC
ACCGCGGCGTGATGCTCTGCGGCGACCGGCACGGCAACACCGGCGACGCC
TTCCGTTGCTCGTACCACGCGTGGACCTTCCACCACGACGGCAAGCTGAA
GAACATCCCGATGATGGAATCGGGCTACAAGGGCACCCGCTGGAACCGCG
ACAATCCCGACATCAACATGAAACCGGCCGCCCGGGTCGAGAACTACCGC
GGCTTCGTGTTCGCCAGCCTCGCCGAGGAAGGCCCGTCGCTCGTGGAGTT
CCTCGGGCCGGCGAAGATCGCCTTCGACGACATCTGCGACCGCGCGCCGG
CGGGCGTGGTCGAGGTCGTGCCCACGTGCTTCCGGGTCATCCAGAATTCC
AACTGGAAGATCTTCCTCGAGAACCAGCTCGACGCGCTGCACCCGTCGGT
CACGCACCAGTCCACCGGGCGCGCCGCGCGCGACGTCGAGGTCGAGCTCG
AGAAGAAGACCGGGCATGCGCCGCTCGCCTACCACATGCTGTCGGCCTTC
TCGACCGTGACGATCGACAAGTGGGACAACTTCCAGACGATCAACTACCC
GTACGGCCACTGCATCCTGACCGGCTACATGGGCCTGCGCCCGCAGGACC
CGGACACGCTGGCCTACGAGAAGACGCTGGTGAAGGCCTATGGCGAGAAG
AAGAAGGAGGAGATCCTGACGACCAACATCCACCACGTCCTGCTCTACCC
GGGGCTGTCGGTGCAGTCGCCGCTGCAGCAGCTGCGCGCGGTGCGGCCGC
TGGGCGTCAACAAGACGCTGACCGAGATCTGGCACTTCCGCCTGAAGGGC
GCGCCCGAGCCGATCTACCGCCGGGCGCTGGCGTACTACAACCTGGTCAA
CTCCCCCGCCACGCTGATCAACGCGGACGACCTCGAGAATTTCTGGAAAG
CCCAGACGGGCCTCGCATCGGACGGCGGCGAATGGGTGAGTTTCGCGCGG
CACCACGGCCGCGACATCGAGAAGAACGGCGCGCTCGAGACGGCCGAGGG
CATGGGCACGTCGGAGGCACCGATGCGCAACCAGATGAAGGCGTGGGCCG
AATTCATGGCGAACGCATAA
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