prot_P-wetherbeei_contig16545.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16545.1.1
Unique Nameprot_P-wetherbeei_contig16545.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length148
Homology
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A7C4TP59_9HYPH (MarR family transcriptional regulator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TP59_9HYPH)

HSP 1 Score: 228 bits (581), Expect = 1.710e-74
Identity = 114/148 (77.03%), Postives = 133/148 (89.86%), Query Frame = 0
Query:    1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLGTM 148
            M KEKS+DRL+RSP+HLLHRAGQCAGDIFQ EMA  GLTPRQ+AVL TVS NEGLSQTNLV+ TGIDRSTLADIIRRM++KGL+ RRRTKEDARAY+V+LTDEG RVL++++PLAR+VDDK+L+ L   +RERFLQDLGKIVR +G M
Sbjct:    1 MPKEKSADRLERSPVHLLHRAGQCAGDIFQAEMADGGLTPRQYAVLYTVSHNEGLSQTNLVEKTGIDRSTLADIIRRMLRKGLLARRRTKEDARAYSVKLTDEGWRVLKSAEPLARRVDDKILAALPTQDRERFLQDLGKIVRNIGPM 148          
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A2S5PBX5_HYPSQ (MarR family transcriptional regulator n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5PBX5_HYPSQ)

HSP 1 Score: 216 bits (550), Expect = 1.140e-69
Identity = 109/145 (75.17%), Postives = 129/145 (88.97%), Query Frame = 0
Query:    1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRML 145
            MAKE  + RL+RSPIHLLHRAGQCAGDIFQ EM A+ LTPRQFAVLVTVSQNEGLSQTNLV+ TGIDRSTLADI+RRM+KKGL+QRRRTKEDARAY+V+L+DEG R L++++P+AR+VDDKVL+VLS  +R+RF+ DL  IV  L
Sbjct:    6 MAKEAQAPRLERSPIHLLHRAGQCAGDIFQTEMGASDLTPRQFAVLVTVSQNEGLSQTNLVEKTGIDRSTLADIVRRMLKKGLLQRRRTKEDARAYSVKLSDEGWRTLKSAEPMARRVDDKVLAVLSGPQRDRFVNDLNTIVEAL 150          
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A6I3KKW2_9HYPH (MarR family transcriptional regulator n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A6I3KKW2_9HYPH)

HSP 1 Score: 211 bits (536), Expect = 1.300e-67
Identity = 104/146 (71.23%), Postives = 128/146 (87.67%), Query Frame = 0
Query:    3 KEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLGTM 148
            ++ +  +L+RSPIHLLHRAGQCA DIFQGEM A  LTPRQ+AVLV VS NEG+SQT LV+ TG+DRSTLADI+RRM+KKGL+QRRRTKEDARAY+V+LTDEG +VL+A+DPLAR+VDD++L VL  A+RERFLQDL +IV+ LG +
Sbjct:    7 RDMAGGKLERSPIHLLHRAGQCASDIFQGEMVAGDLTPRQYAVLVAVSLNEGVSQTLLVEKTGVDRSTLADIVRRMLKKGLLQRRRTKEDARAYSVKLTDEGWKVLKAADPLARRVDDRILGVLPGAQRERFLQDLNQIVKALGKL 152          
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A101VID2_9PROT (MarR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium BRH_c36 TaxID=1734406 RepID=A0A101VID2_9PROT)

HSP 1 Score: 208 bits (529), Expect = 1.790e-66
Identity = 104/148 (70.27%), Postives = 124/148 (83.78%), Query Frame = 0
Query:    1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLGTM 148
            M KE    +L++SPIHLLHRAGQCAGD+FQ EM    LTPRQ+AVLV V++NEGLSQTNLVD TGIDRSTLADIIRRM+KKGLVQRRRTKEDARAYAV+LT++G R+L A++P+A+KVD+++L  L  AERERFL DL  IV  LG +
Sbjct:    1 MQKESKVVQLEQSPIHLLHRAGQCAGDVFQSEMRTEDLTPRQYAVLVAVAENEGLSQTNLVDMTGIDRSTLADIIRRMLKKGLVQRRRTKEDARAYAVKLTEDGRRILEAAEPMAKKVDERILQALPAAERERFLSDLSMIVEALGKL 148          
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A849TQV1_9HYPH (MarR family transcriptional regulator n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A849TQV1_9HYPH)

HSP 1 Score: 205 bits (521), Expect = 2.200e-65
Identity = 100/148 (67.57%), Postives = 124/148 (83.78%), Query Frame = 0
Query:    1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLGTM 148
            MA+E+ +DRL RSP+H+LHRAGQCAGD+F GE+    LTPRQ+AVL TV+QNEGLSQT LVD TGIDRSTLADI+RRM+KKGL+QRRRTKEDARAYAV+LT+EG R+LR ++P+AR+VD+++L  L   +RE+FL DL  IV  L  M
Sbjct:    1 MAREEKADRLSRSPLHMLHRAGQCAGDLFHGEIKDGDLTPRQYAVLATVAQNEGLSQTGLVDRTGIDRSTLADIVRRMLKKGLLQRRRTKEDARAYAVKLTEEGKRMLRTAEPIARRVDERILEGLQAKQREQFLDDLSTIVTTLSKM 148          
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A258L578_9HYPH (MarR family transcriptional regulator n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A258L578_9HYPH)

HSP 1 Score: 204 bits (519), Expect = 5.380e-65
Identity = 104/143 (72.73%), Postives = 122/143 (85.31%), Query Frame = 0
Query:    4 EKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLG 146
            + SS+ LDRSPIHLLHRAGQCA DIFQ EM    LTPRQ+AVL+TVSQNEGLSQT LV+ TGIDRSTLADI+RRM+KKGL+ RRRT+EDARAYAVRLTD+G + LR +DP+AR+VD+++LS L  A+RERFL DLG IV  LG
Sbjct:   12 QASSNELDRSPIHLLHRAGQCAADIFQVEMGLDDLTPRQYAVLLTVSQNEGLSQTQLVEKTGIDRSTLADIVRRMLKKGLLSRRRTREDARAYAVRLTDDGWKSLRTADPVARRVDERILSALPAAQRERFLTDLGTIVTALG 154          
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A800BA50_9BACT (MarR family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800BA50_9BACT)

HSP 1 Score: 202 bits (513), Expect = 3.630e-64
Identity = 99/139 (71.22%), Postives = 123/139 (88.49%), Query Frame = 0
Query:    9 RLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLGT 147
            RL+RSPIHLLHRAGQCA DIFQGEM+   LTPRQ+A+LV V+QNEGLSQT LV+ TG+DRSTLADI+RRM+KKGL+QRRRTK+DARAYAV+LTDEG RVL+A++P+A++VD+ +LS LS+ +RERFL+DL  IV  L +
Sbjct:    5 RLERSPIHLLHRAGQCASDIFQGEMSEGDLTPRQYALLVAVAQNEGLSQTQLVEKTGVDRSTLADIVRRMLKKGLLQRRRTKDDARAYAVKLTDEGWRVLKAAEPMAKRVDEAILSALSDTQRERFLEDLVAIVESLSS 143          
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A6N6T3Z7_9HYPH (MarR family transcriptional regulator n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T3Z7_9HYPH)

HSP 1 Score: 201 bits (510), Expect = 9.410e-64
Identity = 101/145 (69.66%), Postives = 120/145 (82.76%), Query Frame = 0
Query:    1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRML 145
            M +E S+DRL RSPIHLLHRAGQCAGDIF  EM    LTPRQ AVLVTV+ NEGLSQT LVD TGIDRSTLADI+RRM +KGL+QRRRT+EDARAYAV+LTDEG RVLR ++PL+R+VD+++L  L + +RE+F+ DL  IV  L
Sbjct:    1 MKREASTDRLSRSPIHLLHRAGQCAGDIFHTEMKDGDLTPRQLAVLVTVAHNEGLSQTGLVDRTGIDRSTLADIVRRMQRKGLLQRRRTREDARAYAVKLTDEGRRVLRVAEPLSRRVDERILEALPSKQREQFIDDLQSIVEAL 145          
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A2S5MAT9_HYPSQ (MarR family transcriptional regulator n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MAT9_HYPSQ)

HSP 1 Score: 199 bits (507), Expect = 2.970e-63
Identity = 100/146 (68.49%), Postives = 125/146 (85.62%), Query Frame = 0
Query:    1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLG 146
            MA+E ++ RLD+SP+HLLHRAGQ A + F+ EMA   LTPRQFAVLVTVSQNEGLSQTNLV+ TGIDRSTLAD++RRM+KKGL++RRRT+ DARAY+V+LTDEG+R+L+ +DPLA +VDD++LS L  A RERF+QDL  IV  +G
Sbjct:    1 MARETTTHRLDKSPLHLLHRAGQGATEAFEREMATDSLTPRQFAVLVTVSQNEGLSQTNLVEQTGIDRSTLADVVRRMLKKGLIKRRRTRHDARAYSVKLTDEGSRMLKIADPLADRVDDRILSSLPVARRERFMQDLRAIVHGMG 146          
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A3S0RDT1_HYPSQ (MarR family transcriptional regulator n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A3S0RDT1_HYPSQ)

HSP 1 Score: 199 bits (505), Expect = 5.790e-63
Identity = 96/145 (66.21%), Postives = 126/145 (86.90%), Query Frame = 0
Query:    1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRML 145
            MA+E + +RL+RSP+HLLHRAGQCA +IFQ E+ +  LTPRQFA+L+TV+QNEGL+QT LV+ TGIDRSTLAD++RRM+KKGL+QRRRT++DARAYAV+LT+EG RVL+  DP+AR+VD+++LS L   +R+RFLQDL  IV+ L
Sbjct:    1 MARETAGNRLERSPLHLLHRAGQCAAEIFQVELGSDDLTPRQFAILLTVAQNEGLNQTQLVEMTGIDRSTLADVVRRMLKKGLLQRRRTRDDARAYAVKLTEEGARVLKTHDPMARRVDERILSSLPAQQRDRFLQDLSSIVQTL 145          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TP59_9HYPH1.710e-7477.03MarR family transcriptional regulator n=1 Tax=Hyph... [more]
A0A2S5PBX5_HYPSQ1.140e-6975.17MarR family transcriptional regulator n=2 Tax=Hyph... [more]
A0A6I3KKW2_9HYPH1.300e-6771.23MarR family transcriptional regulator n=4 Tax=Hyph... [more]
A0A101VID2_9PROT1.790e-6670.27MarR family transcriptional regulator n=1 Tax=Alph... [more]
A0A849TQV1_9HYPH2.200e-6567.57MarR family transcriptional regulator n=1 Tax=Hyph... [more]
A0A258L578_9HYPH5.380e-6572.73MarR family transcriptional regulator n=2 Tax=uncl... [more]
A0A800BA50_9BACT3.630e-6471.22MarR family transcriptional regulator n=1 Tax=Plan... [more]
A0A6N6T3Z7_9HYPH9.410e-6469.66MarR family transcriptional regulator n=1 Tax=Hyph... [more]
A0A2S5MAT9_HYPSQ2.970e-6368.49MarR family transcriptional regulator n=1 Tax=Hyph... [more]
A0A3S0RDT1_HYPSQ5.790e-6366.21MarR family transcriptional regulator n=1 Tax=Hyph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000835MarR-type HTH domainPRINTSPR00598HTHMARRcoord: 91..107
score: 33.82
coord: 72..87
score: 26.04
coord: 121..141
score: 25.0
coord: 55..71
score: 25.49
IPR000835MarR-type HTH domainSMARTSM00347marrlong4coord: 31..131
e-value: 6.1E-19
score: 78.9
IPR000835MarR-type HTH domainPFAMPF01047MarRcoord: 38..95
e-value: 6.7E-15
score: 54.7
IPR000835MarR-type HTH domainPROSITEPS50995HTH_MARR_2coord: 11..143
score: 29.846537
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..143
e-value: 2.5E-34
score: 120.3
NoneNo IPR availablePANTHERPTHR33164:SF57TRANSCRIPTIONAL REGULATOR-RELATEDcoord: 12..144
NoneNo IPR availablePANTHERPTHR33164TRANSCRIPTIONAL REGULATOR, MARR FAMILYcoord: 12..144
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 7..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16545contigP-wetherbeei_contig16545:10..453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16545.1.1mRNA_P-wetherbeei_contig16545.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16545 10..453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16545.1.1 ID=prot_P-wetherbeei_contig16545.1.1|Name=mRNA_P-wetherbeei_contig16545.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp
MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVS
QNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRL
TDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLGTM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000835HTH_MarR-typ
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf