mRNA_P-wetherbeei_contig16506.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16506.1.1
Unique NamemRNA_P-wetherbeei_contig16506.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16506.1.1 vs. uniprot
Match: A0A6A7MGG0_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7MGG0_9PROT)

HSP 1 Score: 488 bits (1256), Expect = 5.340e-171
Identity = 241/324 (74.38%), Postives = 274/324 (84.57%), Query Frame = 1
Query:   49 RVRTMRRRAVLGAAVVLAAPSIVQAQAYPARGVRVVNAYSPGGTADVVCRILCQALTERLGQTFTVDNKPGAGGTVAAQIVARAPNDGYTLLYDATAHSVNPQLRRGQLQYDTLKDLLPVFLSMQAPNTLMRNVQFEAATMPELIALAKKKPGVLDCASTGVGTVQHISLELLNHMAGVKINLVPYRDFGTLRGDLVSGRIPLQFSNVPATVGMRGTKEVTCMAHTGPKPIDVLPGIPGIAEVLPGYETWEWNGVFVPAGTDSGLITRLNQEMNAAVAVPTVAARLAELGALSRTNTVQEFADFREKQIAFFTDMVQRANIKLE 1020
            R++ +RRRAVLGAAV LA P+I +AQAYPAR VRVVNAYSPGGTADV+CRILC A+TE+LGQTF VDNKPGA GTVAAQIVARAP DGYTLLYDATAHSVNP L  G+L YDTL+DLLPVFLSMQ PNTL  NV+FEA T+PELIALAK KPG LDCASTGVGTVQH++LELLN  A +KIN VPY++ G  R DL +GR+P+QF NVP TV +R  KEVTCM HTGPKPI+VLPG+PG+AE LPG+ETWEWNGVFVPAGTD+ LI RLN+EMNA    P   ARL ELGAL+R NTV EFA FRE+QIAFF +MV+ ANI++E
Sbjct:   30 RIQAIRRRAVLGAAVGLAVPAIARAQAYPARSVRVVNAYSPGGTADVICRILCAAMTEKLGQTFAVDNKPGAAGTVAAQIVARAPADGYTLLYDATAHSVNPSLFAGKLPYDTLRDLLPVFLSMQTPNTLNCNVRFEAKTVPELIALAKSKPGGLDCASTGVGTVQHVTLELLNQRASIKINHVPYKEMGAARNDLFAGRVPMQFGNVPGTVALRSAKEVTCMVHTGPKPIEVLPGVPGMAETLPGFETWEWNGVFVPAGTDAALIARLNEEMNAVFRAPATGARLVELGALTRPNTVAEFAAFREQQIAFFAEMVKSANIRIE 353          
BLAST of mRNA_P-wetherbeei_contig16506.1.1 vs. uniprot
Match: A0A521QMI1_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Reyranella TaxID=445219 RepID=A0A521QMI1_9HYPH)

HSP 1 Score: 465 bits (1196), Expect = 6.650e-162
Identity = 239/342 (69.88%), Postives = 280/342 (81.87%), Query Frame = 1
Query:    1 HAAGKCRGSWRDKPMRRVRTMRRRAVL--GAAVVLAAPSIVQAQAYPARGVRVVNAYSPGGTADVVCRILCQALTERLGQTFTVDNKPGAGGTVAAQIVARAPNDGYTLLYDATAHSVNPQLRRGQLQYDTLKDLLPVFLSMQAPNTLMRNVQFEAATMPELIALAKKKPGVLDCASTGVGTVQHISLELLNHMAGVKINLVPYRDFGTLRGDLVSGRIPLQFSNVPATVGMRGTKEVTCMAHTGPKPIDVLPGIPGIAEVLPGYETWEWNGVFVPAGTDSGLITRLNQEMNAAVAVPTVAARLAELGALSRTNTVQEFADFREKQIAFFTDMVQRANIKLE 1020
            +AA +CR S R   M R R++RRRAVL  GAA VL+AP+I++AQ YP++ VRVVNAYSPGGTADVVCRI C AL+ RLGQTFTVDNKPGA GTVAAQIVARAP+DGYTLLYDATAHSVNP L  G+L YDT +DLLPVFL+MQ PNTLMRN +FEA T+ ELI LAKKKPG LDCASTGVGTVQH+SLELLN  AGV+IN VPY++FGT R DL +GR+PLQFSNVP TV ++   EVTCMAHTGPKP+ VL  +P I+ VLPG+ETWEWNG+F PAGTD  LIT+LN E+N  + V     RL+ELGAL+R NTV EFA FRE+QIAFF ++ + ANI++E
Sbjct:   11 NAALQCR-SRRTMLMIRSRSVRRRAVLATGAAAVLSAPAILRAQNYPSKPVRVVNAYSPGGTADVVCRIFCAALSTRLGQTFTVDNKPGAAGTVAAQIVARAPHDGYTLLYDATAHSVNPSLFAGRLPYDTQRDLLPVFLTMQTPNTLMRNSKFEAQTVAELIELAKKKPGALDCASTGVGTVQHVSLELLNQRAGVRINHVPYKEFGTARNDLFAGRVPLQFSNVPGTVAVKSASEVTCMAHTGPKPVGVLADVPAISGVLPGFETWEWNGLFAPAGTDPSLITKLNAELNQVLKVQETVQRLSELGALTRANTVAEFAAFREQQIAFFAEITKTANIRIE 351          
BLAST of mRNA_P-wetherbeei_contig16506.1.1 vs. uniprot
Match: A0A1Q3KV26_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KV26_9PROT)

HSP 1 Score: 459 bits (1180), Expect = 9.160e-160
Identity = 226/332 (68.07%), Postives = 271/332 (81.63%), Query Frame = 1
Query:   43 MRRVRTMRRRAVL------GAAVVLAAPSIVQAQAYPARGVRVVNAYSPGGTADVVCRILCQALTERLGQTFTVDNKPGAGGTVAAQIVARAPNDGYTLLYDATAHSVNPQLRRGQLQYDTLKDLLPVFLSMQAPNTLMRNVQFEAATMPELIALAKKKPGVLDCASTGVGTVQHISLELLNHMAGVKINLVPYRDFGTLRGDLVSGRIPLQFSNVPATVGMRGTKEVTCMAHTGPKPIDVLPGIPGIAEVLPGYETWEWNGVFVPAGTDSGLITRLNQEMNAAVAVPTVAARLAELGALSRTNTVQEFADFREKQIAFFTDMVQRANIKLE 1020
            M++ R +RRR+VL      GAA +++AP+++ A  YP++ VRVVNAYSPGGTADVVCR+ C AL+ RLGQTF VDNKPGA GT+AAQIVARAP+DGYTLLYDATAHSVNP L  G+L YDT +DLLPVFL+MQ PNTLMRN +FEA T+ ELI LA+KKPG LDCASTGVGTVQH+SLELLN  AG++IN VPY++FGT R DL +GR+PLQFSNVP TV +R   EVTCMAHTGPKP++VL G+P I+EVLPG+ETWEWNG+F PAGTD  LI +LN E+N  + V     RL+ELGALSR NTV EFA FRE+QIAFF D+ + ANI++E
Sbjct:    1 MKKARPLRRRSVLAAGAAAGAAAIVSAPALLSADTYPSKPVRVVNAYSPGGTADVVCRLYCAALSLRLGQTFAVDNKPGAAGTLAAQIVARAPHDGYTLLYDATAHSVNPSLFAGRLPYDTQRDLLPVFLTMQTPNTLMRNSKFEAQTVAELIELARKKPGALDCASTGVGTVQHVSLELLNQRAGLRINHVPYKEFGTARNDLFAGRVPLQFSNVPGTVAVRSASEVTCMAHTGPKPVEVLAGVPAISEVLPGFETWEWNGLFAPAGTDPALIAKLNTELNEVIKVQATLQRLSELGALSRANTVAEFAAFREQQIAFFADITKTANIRIE 332          
BLAST of mRNA_P-wetherbeei_contig16506.1.1 vs. uniprot
Match: A0A259MUY4_9PROT (Uncharacterized protein n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MUY4_9PROT)

HSP 1 Score: 454 bits (1169), Expect = 3.610e-158
Identity = 225/322 (69.88%), Postives = 271/322 (84.16%), Query Frame = 1
Query:   58 TMRRRAVLGAAV-VLAAPSIVQAQAYPARGVRVVNAYSPGGTADVVCRILCQALTERLGQTFTVDNKPGAGGTVAAQIVARAPNDGYTLLYDATAHSVNPQLRRGQLQYDTLKDLLPVFLSMQAPNTLMRNVQFEAATMPELIALAKKKPGVLDCASTGVGTVQHISLELLNHMAGVKINLVPYRDFGTLRGDLVSGRIPLQFSNVPATVGMRGTKEVTCMAHTGPKPIDVLPGIPGIAEVLPGYETWEWNGVFVPAGTDSGLITRLNQEMNAAVAVPTVAARLAELGALSRTNTVQEFADFREKQIAFFTDMVQRANIKLE 1020
            +MRRR  LGAAV  LAAP+I +AQA+P + VRVVNAYS GGTADVVCRI CQAL E+LGQ+FTVDNKPGA GT+AAQIVARAPNDGYT+LYDATA SVNP L  G+L YDT +DLLP+  +MQ P TLMRN QF+A T+PELIALAK KPG LDCASTG+GTVQH+SLELLN  AG+KIN VPY++ G++R DL +GR+PL FSNVP TV +  +K+V+CMAHTGPKP++VLPG+P I+EV+PG+ETWEWNG+F PAGTD  LI+RLN E+NA + + +VA RLAELGAL++ NTV EF  FREKQIAFF +MV+ ANI++E
Sbjct:    6 SMRRRIFLGAAVGTLAAPAIGRAQAWPNKPVRVVNAYSAGGTADVVCRIYCQALGEKLGQSFTVDNKPGAAGTIAAQIVARAPNDGYTILYDATAQSVNPSLFAGKLSYDTQRDLLPIAQTMQTPVTLMRNAQFQAKTVPELIALAKSKPGALDCASTGIGTVQHVSLELLNQKAGIKINHVPYKEMGSVRNDLFAGRVPLLFSNVPGTVALLTSKDVSCMAHTGPKPVEVLPGVPAISEVIPGFETWEWNGLFAPAGTDPALISRLNAEVNAVMKMESVAKRLAELGALTQANTVAEFTAFREKQIAFFAEMVKSANIRIE 327          
BLAST of mRNA_P-wetherbeei_contig16506.1.1 vs. uniprot
Match: UPI001CFEEB71 (tripartite tricarboxylate transporter substrate-binding protein n=1 Tax=Roseicella sp. GB24 TaxID=2883479 RepID=UPI001CFEEB71)

HSP 1 Score: 413 bits (1061), Expect = 9.790e-142
Identity = 208/320 (65.00%), Postives = 255/320 (79.69%), Query Frame = 1
Query:   67 RRAVLGAAVV-LAAPSIVQAQA-YPARGVRVVNAYSPGGTADVVCRILCQALTERLGQTFTVDNKPGAGGTVAAQIVARAPNDGYTLLYDATAHSVNPQLRRGQLQYDTLKDLLPVFLSMQAPNTLMRNVQFEAATMPELIALAKKKPGVLDCASTGVGTVQHISLELLNHMAGVKINLVPYRDFGTLRGDLVSGRIPLQFSNVPATVGMRGTKEVTCMAHTGPKPIDVLPGIPGIAEVLPGYETWEWNGVFVPAGTDSGLITRLNQEMNAAVAVPTVAARLAELGALSRTNTVQEFADFREKQIAFFTDMVQRANIKLE 1020
            RRA+L AAV+ LAAPSI +AQ  YPAR VRVVNAYSPGGTADVVCRIL  AL ER+GQ+F V+N+PGA GT+AAQ VARA  DGYT+LYDATAHSVNP L   +L YDT KDLLPVFL+MQ PNTLMR+  FEA T+PELIALAK +PG LDCASTG+GTVQH+SLEL N +AGV+IN + YR+    R DL SGR+PLQFSNVP+T+ +    +  C+AH GP P+ VLPGIP +AE LPG+ETWEWNG+F PAGT + ++  LN E+NA +  P V ARL  LGAL+R N +++FA FRE+QIAFF +MV++A+I+++
Sbjct:    9 RRALLAAAVLGLAAPSIARAQGRYPARSVRVVNAYSPGGTADVVCRILFGALGERMGQSFAVENRPGAAGTLAAQAVARATGDGYTVLYDATAHSVNPSLFGARLPYDTRKDLLPVFLAMQTPNTLMRSPGFEARTVPELIALAKARPGRLDCASTGIGTVQHVSLELFNMLAGVRINHIVYREIAAARNDLTSGRVPLQFSNVPSTLPLTQANQAVCLAHCGPAPVSVLPGIPAMAEYLPGFETWEWNGIFAPAGTPAEVMQVLNTELNAVIRDPAVVARLTGLGALTRANGIEDFAAFREQQIAFFAEMVRKADIRID 328          
BLAST of mRNA_P-wetherbeei_contig16506.1.1 vs. uniprot
Match: UPI00165A45FC (tripartite tricarboxylate transporter substrate-binding protein n=1 Tax=Siccirubricoccus phaeus TaxID=2595053 RepID=UPI00165A45FC)

HSP 1 Score: 402 bits (1033), Expect = 1.760e-137
Identity = 205/325 (63.08%), Postives = 249/325 (76.62%), Query Frame = 1
Query:   58 TMRRRAVLGAAVV---LAAPSIVQAQ-AYPARGVRVVNAYSPGGTADVVCRILCQALTERLGQTFTVDNKPGAGGTVAAQIVARAPNDGYTLLYDATAHSVNPQLRRGQLQYDTLKDLLPVFLSMQAPNTLMRNVQFEAATMPELIALAKKKPGVLDCASTGVGTVQHISLELLNHMAGVKINLVPYRDFGTLRGDLVSGRIPLQFSNVPATVGMRGTKEVTCMAHTGPKPIDVLPGIPGIAEVLPGYETWEWNGVFVPAGTDSGLITRLNQEMNAAVAVPTVAARLAELGALSRTNTVQEFADFREKQIAFFTDMVQRANIKLE 1020
            T  RRA LGA +    LAAP + +AQ +YPAR VRVVNAYSPGGTADVV RI+   L+ RLGQ F V+N+PGA GTVAAQ VARAP DGYTLLYDATAHSVNP L   +L Y+T +DL+PVFL+M  PNTL    +F A ++PEL+ALAK+KPG LDC+STG+GTVQH+SLEL NH AG +IN VPYR+FG  R DL+SGR+PLQFSNVP +V +   K+   MAH G  P+ VLPG+P IA+ LPG+ET+EWNG+F PAGTD  LI+ LN  +NA +  P V  RL  LGAL+R NTV+EFA FRE+QIAFF DMV+ ANI+++
Sbjct:    4 TATRRAALGALLAASGLAAPGLARAQGSYPARSVRVVNAYSPGGTADVVSRIVLAGLSARLGQQFVVENRPGAAGTVAAQAVARAPADGYTLLYDATAHSVNPSLFGSRLPYETRRDLMPVFLTMVTPNTLHATKEFPAHSVPELVALAKEKPGQLDCSSTGIGTVQHVSLELFNHRAGTQINHVPYREFGAARNDLISGRVPLQFSNVPGSVPIFAAKDAQVMAHCGLSPLSVLPGVPAIADTLPGFETYEWNGLFTPAGTDPALISLLNTALNAVIREPAVTERLLTLGALTRPNTVEEFAAFREQQIAFFADMVRMANIRID 328          
BLAST of mRNA_P-wetherbeei_contig16506.1.1 vs. uniprot
Match: A0A849MU50_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Roseicella sp. DB1501 TaxID=2730925 RepID=A0A849MU50_9PROT)

HSP 1 Score: 397 bits (1019), Expect = 2.350e-135
Identity = 200/320 (62.50%), Postives = 246/320 (76.88%), Query Frame = 1
Query:   64 RRRAVLGAAVVLAAPSIVQAQA-YPARGVRVVNAYSPGGTADVVCRILCQALTERLGQTFTVDNKPGAGGTVAAQIVARAPNDGYTLLYDATAHSVNPQLRRGQLQYDTLKDLLPVFLSMQAPNTLMRNVQFEAATMPELIALAKKKPGVLDCASTGVGTVQHISLELLNHMAGVKINLVPYRDFGTLRGDLVSGRIPLQFSNVPATVGMRGTKEVTCMAHTGPKPIDVLPGIPGIAEVLPGYETWEWNGVFVPAGTDSGLITRLNQEMNAAVAVPTVAARLAELGALSRTNTVQEFADFREKQIAFFTDMVQRANIKLE 1020
            RR  +   A+ LA P +++AQ  YP   VRVVNAYSPGGTADVVCRIL  AL+ERLGQ+F V+N+PGA GT+AAQ VARA  D YTLLYDATAHSVNP L   +L YDT KDLLPVFL+M  PNTLMR    EA T+P+LIALAK++PG LDCASTG+GTVQH+SLEL N  AGVKIN + Y++    R DL +GRIPLQFSNVP+T+ +  + +  CMAH GP+PI VLPG+P + E LPG+ETWEWNGVF PAGT   L+ +LN  +NA +  P V ARL ELGAL+R N++++FA FRE+QIAFF DMV++A+I ++
Sbjct:    9 RRLLLATGAMGLAMPGLLRAQGRYPDHTVRVVNAYSPGGTADVVCRILFTALSERLGQSFAVENRPGAAGTLAAQAVARATPDAYTLLYDATAHSVNPSLFGSRLSYDTRKDLLPVFLAMLTPNTLMRANSLEARTIPDLIALAKRRPGQLDCASTGIGTVQHVSLELFNMRAGVKINHIVYKEIAASRNDLAAGRIPLQFSNVPSTLAVTQSNQAVCMAHCGPEPIGVLPGVPAMTEFLPGFETWEWNGVFAPAGTPLPLMRQLNAALNAVIREPAVVARLTELGALTRANSIEDFAAFREQQIAFFADMVKKADIHID 328          
BLAST of mRNA_P-wetherbeei_contig16506.1.1 vs. uniprot
Match: UPI001C2CBE53 (tripartite tricarboxylate transporter substrate-binding protein n=1 Tax=Siccirubricoccus sp. G192 TaxID=2849651 RepID=UPI001C2CBE53)

HSP 1 Score: 396 bits (1017), Expect = 4.260e-135
Identity = 205/324 (63.27%), Postives = 242/324 (74.69%), Query Frame = 1
Query:   52 VRTMRRRAVLGAAVVLAAPSIVQAQ-AYPARGVRVVNAYSPGGTADVVCRILCQALTERLGQTFTVDNKPGAGGTVAAQIVARAPNDGYTLLYDATAHSVNPQLRRGQLQYDTLKDLLPVFLSMQAPNTLMRNVQFEAATMPELIALAKKKPGVLDCASTGVGTVQHISLELLNHMAGVKINLVPYRDFGTLRGDLVSGRIPLQFSNVPATVGMRGTKEVTCMAHTGPKPIDVLPGIPGIAEVLPGYETWEWNGVFVPAGTDSGLITRLNQEMNAAVAVPTVAARLAELGALSRTNTVQEFADFREKQIAFFTDMVQRANIKLE 1020
            V+   RR VL AA  LAAP +++AQ AYP R VRV+NAYSPGGTADVVCRI+   L+ERLGQ    +N+PGA GT+AA  VARAP DGYTLLYDATAHSVNP L   +L YDT +DLLPVFLSM  PNTL     FEA T+PELIALAK KPG LDC STG+GTVQH+SLELLNHMAGV IN + YRD    R DLVSGR+PLQFSNVP +V    +     MAH GP+P+ VLP IP IAE LPG+ET+EWNGVF P+GT   +I ++N E+NA +  P    RL+ LGAL+R NT +EF  FRE+QIAFFT MV+ ANI+++
Sbjct:    2 VKRQGRRVVLAAAAALAAPGVLRAQGAYPQRSVRVINAYSPGGTADVVCRIIFGRLSERLGQQSVTENRPGAAGTIAASAVARAPADGYTLLYDATAHSVNPSLFGTRLPYDTQRDLLPVFLSMVTPNTLHSTNGFEARTVPELIALAKAKPGQLDCCSTGIGTVQHVSLELLNHMAGVWINHIAYRDISAARNDLVSGRVPLQFSNVPGSVPFLQSGIARVMAHCGPRPVAVLPDIPAIAETLPGFETYEWNGVFAPSGTPDAIIGQVNAELNAVIRDPATIERLSGLGALTRANTPEEFGAFREQQIAFFTGMVRLANIRID 325          
BLAST of mRNA_P-wetherbeei_contig16506.1.1 vs. uniprot
Match: A0A4R4DSQ7_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Paracraurococcus sp. NE82 TaxID=2527868 RepID=A0A4R4DSQ7_9PROT)

HSP 1 Score: 395 bits (1016), Expect = 6.700e-135
Identity = 197/321 (61.37%), Postives = 246/321 (76.64%), Query Frame = 1
Query:   64 RRRAVLGAAVV-LAAPSIVQAQA-YPARGVRVVNAYSPGGTADVVCRILCQALTERLGQTFTVDNKPGAGGTVAAQIVARAPNDGYTLLYDATAHSVNPQLRRGQLQYDTLKDLLPVFLSMQAPNTLMRNVQFEAATMPELIALAKKKPGVLDCASTGVGTVQHISLELLNHMAGVKINLVPYRDFGTLRGDLVSGRIPLQFSNVPATVGMRGTKEVTCMAHTGPKPIDVLPGIPGIAEVLPGYETWEWNGVFVPAGTDSGLITRLNQEMNAAVAVPTVAARLAELGALSRTNTVQEFADFREKQIAFFTDMVQRANIKLE 1020
            RRR +L AA   L AP++ +AQ  +P   VRVVNAYS GGTADV+CRI C AL ERLGQ F V+N+PGA GTVAAQ VARAP DGYTLLYDATA SVNP L   +L YDT KDLLPVFL+MQ PNTLMR   FEA T+PELI LAK+ PG +DC+STG+GTVQH+SLEL N +AG +IN + Y++    R DL +GR+PLQFSNVP T+ +    +V CMAH GP P+ VLPG+P +AE LPG+ETWEWNGVF PAGT + ++ +LN E+NA    P + A+L  LGA++R N++++F DFRE+QIAFF DMV++ANI+++
Sbjct:    8 RRRTLLAAASAGLFAPALPRAQGRWPKASVRVVNAYSAGGTADVICRIYCAALGERLGQGFAVENRPGAAGTVAAQAVARAPADGYTLLYDATAQSVNPSLFGSRLPYDTRKDLLPVFLTMQTPNTLMRWPGFEARTVPELIDLAKRNPGRIDCSSTGIGTVQHVSLELFNMLAGTRINHIVYKEIAASRNDLTTGRVPLQFSNVPGTLPLTQAGQVVCMAHCGPSPVSVLPGVPAMAEFLPGFETWEWNGVFAPAGTPAEILRQLNTELNAVARDPAIVAKLTGLGAIARPNSLEDFTDFRERQIAFFADMVKKANIRID 328          
BLAST of mRNA_P-wetherbeei_contig16506.1.1 vs. uniprot
Match: UPI00105804D5 (tripartite tricarboxylate transporter substrate-binding protein n=2 Tax=Paracraurococcus ruber TaxID=77675 RepID=UPI00105804D5)

HSP 1 Score: 393 bits (1010), Expect = 6.060e-134
Identity = 191/297 (64.31%), Postives = 235/297 (79.12%), Query Frame = 1
Query:  130 YPARGVRVVNAYSPGGTADVVCRILCQALTERLGQTFTVDNKPGAGGTVAAQIVARAPNDGYTLLYDATAHSVNPQLRRGQLQYDTLKDLLPVFLSMQAPNTLMRNVQFEAATMPELIALAKKKPGVLDCASTGVGTVQHISLELLNHMAGVKINLVPYRDFGTLRGDLVSGRIPLQFSNVPATVGMRGTKEVTCMAHTGPKPIDVLPGIPGIAEVLPGYETWEWNGVFVPAGTDSGLITRLNQEMNAAVAVPTVAARLAELGALSRTNTVQEFADFREKQIAFFTDMVQRANIKLE 1020
            YP R VRVVNAYSPGGTADVVCRI+  AL ER+GQ F V+N+PGA GT+AAQ VARA  DGYTLLYDATAHSVNP L   +L YDT ++LLP+FL+M  PNTLMR  QFEA T+PELI LAK+ PG LDC+STG+GTVQH+SLEL N +AGVKIN + YR+    R DL +GR+PLQFSNVP+T+ +    +  C+AH GP+PI+VLPG+P +AE LPG+ETWEWNGVF PAGT   ++ +LN E+NA V  P V A+L  LGAL+R NT+ EFA FRE+QIAFF DMV++A+I+++
Sbjct:   35 YPNRSVRVVNAYSPGGTADVVCRIVFGALAERMGQGFAVENRPGAAGTLAAQAVARATGDGYTLLYDATAHSVNPSLFGARLPYDTRRELLPIFLTMVTPNTLMRWPQFEAKTVPELIDLAKRMPGKLDCSSTGIGTVQHVSLELFNMLAGVKINHIVYREIAASRNDLTTGRVPLQFSNVPSTLPLTQGNQAVCLAHCGPRPIEVLPGVPAMAEFLPGFETWEWNGVFAPAGTPREILQQLNAELNAVVRDPAVLAKLTGLGALTRANTLDEFAAFREQQIAFFADMVKKADIRID 331          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16506.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A7MGG0_9PROT5.340e-17174.38Tripartite tricarboxylate transporter substrate bi... [more]
A0A521QMI1_9HYPH6.650e-16269.88Tripartite tricarboxylate transporter substrate bi... [more]
A0A1Q3KV26_9PROT9.160e-16068.07Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A259MUY4_9PROT3.610e-15869.88Uncharacterized protein n=5 Tax=Alphaproteobacteri... [more]
UPI001CFEEB719.790e-14265.00tripartite tricarboxylate transporter substrate-bi... [more]
UPI00165A45FC1.760e-13763.08tripartite tricarboxylate transporter substrate-bi... [more]
A0A849MU50_9PROT2.350e-13562.50Tripartite tricarboxylate transporter substrate bi... [more]
UPI001C2CBE534.260e-13563.27tripartite tricarboxylate transporter substrate-bi... [more]
A0A4R4DSQ7_9PROT6.700e-13561.37Tripartite tricarboxylate transporter substrate bi... [more]
UPI00105804D56.060e-13464.31tripartite tricarboxylate transporter substrate-bi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16506contigP-wetherbeei_contig16506:344..1366 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1205680.CAKO01000029_gene5274
PFAMsTctC
Model size1023
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.22e-159
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2TQWK@28211|Alphaproteobacteria
DescriptionProtein conserved in bacteria
Cds size1023
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186089.0729342-CDS-P-wetherbeei_contig16506:343..13661683186089.0729342-CDS-P-wetherbeei_contig16506:343..1366Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16506 344..1366 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16506.1.1prot_P-wetherbeei_contig16506.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16506 344..1366 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16506.1.1

>prot_P-wetherbeei_contig16506.1.1 ID=prot_P-wetherbeei_contig16506.1.1|Name=mRNA_P-wetherbeei_contig16506.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=341bp
HAAGKCRGSWRDKPMRRVRTMRRRAVLGAAVVLAAPSIVQAQAYPARGVR
VVNAYSPGGTADVVCRILCQALTERLGQTFTVDNKPGAGGTVAAQIVARA
PNDGYTLLYDATAHSVNPQLRRGQLQYDTLKDLLPVFLSMQAPNTLMRNV
QFEAATMPELIALAKKKPGVLDCASTGVGTVQHISLELLNHMAGVKINLV
PYRDFGTLRGDLVSGRIPLQFSNVPATVGMRGTKEVTCMAHTGPKPIDVL
PGIPGIAEVLPGYETWEWNGVFVPAGTDSGLITRLNQEMNAAVAVPTVAA
RLAELGALSRTNTVQEFADFREKQIAFFTDMVQRANIKLE*
back to top

mRNA from alignment at P-wetherbeei_contig16506:344..1366+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16506.1.1 ID=mRNA_P-wetherbeei_contig16506.1.1|Name=mRNA_P-wetherbeei_contig16506.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1023bp|location=Sequence derived from alignment at P-wetherbeei_contig16506:344..1366+ (Phaeothamnion wetherbeei SAG_119_79)
CATGCGGCCGGCAAGTGCCGCGGATCGTGGAGGGACAAGCCCATGCGTAG AGTCCGGACCATGCGGCGGCGCGCCGTGCTGGGTGCTGCCGTCGTGCTCG CGGCGCCGTCGATCGTGCAGGCGCAGGCCTACCCGGCGCGCGGCGTGCGC GTGGTCAATGCCTACAGCCCCGGCGGCACCGCCGATGTCGTCTGCCGCAT CCTGTGCCAGGCGCTGACCGAGCGGCTGGGCCAGACCTTCACCGTCGACA ACAAGCCCGGCGCCGGCGGCACAGTCGCGGCGCAGATCGTGGCGCGTGCG CCCAACGACGGATACACCCTGCTCTACGATGCCACGGCGCATTCGGTGAA CCCGCAGCTGCGCCGCGGCCAGCTCCAATACGACACGCTCAAGGACCTGC TGCCCGTCTTCCTCTCGATGCAGGCGCCCAACACGCTGATGCGCAACGTG CAGTTCGAGGCCGCGACGATGCCCGAGCTGATCGCGCTGGCGAAGAAGAA GCCCGGCGTCCTCGACTGCGCCTCGACCGGCGTCGGCACGGTGCAGCACA TCTCGCTCGAGCTGCTGAACCATATGGCCGGCGTCAAGATCAACCTCGTG CCCTACCGGGATTTCGGCACGCTGCGCGGCGATCTCGTTTCAGGCCGCAT CCCGCTGCAGTTCAGCAACGTGCCGGCCACGGTGGGGATGCGCGGCACCA AGGAGGTGACCTGCATGGCGCACACCGGCCCCAAGCCGATCGACGTCTTG CCCGGCATCCCCGGTATTGCCGAGGTGCTGCCGGGCTACGAAACCTGGGA GTGGAACGGCGTCTTCGTGCCGGCGGGCACAGATTCCGGGCTGATCACGC GGCTGAACCAGGAGATGAACGCCGCCGTCGCCGTGCCGACGGTCGCCGCA CGTTTGGCTGAACTGGGCGCGCTCAGCCGGACCAACACAGTGCAGGAGTT CGCCGATTTCCGCGAGAAGCAGATCGCCTTCTTCACCGACATGGTGCAGC GCGCCAACATCAAACTCGAGTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig16506:344..1366+

>mRNA_P-wetherbeei_contig16506.1.1 ID=mRNA_P-wetherbeei_contig16506.1.1|Name=mRNA_P-wetherbeei_contig16506.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1023bp|location=Sequence derived from alignment at P-wetherbeei_contig16506:344..1366+ (Phaeothamnion wetherbeei SAG_119_79)
CATGCGGCCGGCAAGTGCCGCGGATCGTGGAGGGACAAGCCCATGCGTAG
AGTCCGGACCATGCGGCGGCGCGCCGTGCTGGGTGCTGCCGTCGTGCTCG
CGGCGCCGTCGATCGTGCAGGCGCAGGCCTACCCGGCGCGCGGCGTGCGC
GTGGTCAATGCCTACAGCCCCGGCGGCACCGCCGATGTCGTCTGCCGCAT
CCTGTGCCAGGCGCTGACCGAGCGGCTGGGCCAGACCTTCACCGTCGACA
ACAAGCCCGGCGCCGGCGGCACAGTCGCGGCGCAGATCGTGGCGCGTGCG
CCCAACGACGGATACACCCTGCTCTACGATGCCACGGCGCATTCGGTGAA
CCCGCAGCTGCGCCGCGGCCAGCTCCAATACGACACGCTCAAGGACCTGC
TGCCCGTCTTCCTCTCGATGCAGGCGCCCAACACGCTGATGCGCAACGTG
CAGTTCGAGGCCGCGACGATGCCCGAGCTGATCGCGCTGGCGAAGAAGAA
GCCCGGCGTCCTCGACTGCGCCTCGACCGGCGTCGGCACGGTGCAGCACA
TCTCGCTCGAGCTGCTGAACCATATGGCCGGCGTCAAGATCAACCTCGTG
CCCTACCGGGATTTCGGCACGCTGCGCGGCGATCTCGTTTCAGGCCGCAT
CCCGCTGCAGTTCAGCAACGTGCCGGCCACGGTGGGGATGCGCGGCACCA
AGGAGGTGACCTGCATGGCGCACACCGGCCCCAAGCCGATCGACGTCTTG
CCCGGCATCCCCGGTATTGCCGAGGTGCTGCCGGGCTACGAAACCTGGGA
GTGGAACGGCGTCTTCGTGCCGGCGGGCACAGATTCCGGGCTGATCACGC
GGCTGAACCAGGAGATGAACGCCGCCGTCGCCGTGCCGACGGTCGCCGCA
CGTTTGGCTGAACTGGGCGCGCTCAGCCGGACCAACACAGTGCAGGAGTT
CGCCGATTTCCGCGAGAAGCAGATCGCCTTCTTCACCGACATGGTGCAGC
GCGCCAACATCAAACTCGAGTAG
back to top