mRNA_P-wetherbeei_contig16487.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16487.2.1 vs. uniprot
Match: D7G7U0_ECTSI (Ephrin_rec_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U0_ECTSI) HSP 1 Score: 201 bits (512), Expect = 3.160e-61 Identity = 135/233 (57.94%), Postives = 155/233 (66.52%), Query Frame = 1
Query: 4 ATEAQCVLDCASNVTTGINANA-----------TQRMVGPTEP--DFNATYPYAKAPLPLRSPRFCQVGCAHFFGPAPVNTTCKGICDVTFMHNTSVGFNDWAEKARLECRDGCDIALLRCQAGYYCTNGSMLPCPAGTYRETSYGAVTACTXXXXXXXXAATLGREVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDADGLAVCECITASSCEAMYDQFQRESQPFIGR 663
AT QC LDCA N T + A+A TQR+VGPTEP + NATYPYA+APLPL FCQ+GC++FF +P NTTC G+CD ++ N SVG ND+AEKARLECRDGC+IA+LRCQ GY C G M C GTYR TSY + CT A G V DXXXXXXXXXXXXXXXXXXXXXXXXXXXXY +G A C C+T SC + FQR+S P IGR
Sbjct: 38 ATLEQCHLDCAGNTTAELVADAALNGGSWSVWDTQRLVGPTEPASEVNATYPYARAPLPLPFHSFCQLGCSYFFAGSPRNTTCSGLCDDFYVRNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCAAGVMSECSPGTYRNTSYDMINTCTQCPKGTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAKEEGTAECSCVTEDSCLPEWQNFQRDSMPHIGR 270
BLAST of mRNA_P-wetherbeei_contig16487.2.1 vs. uniprot
Match: A0A7S3HQK9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQK9_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.170e-40 Identity = 106/219 (48.40%), Postives = 133/219 (60.73%), Query Frame = 1
Query: 58 NANATQRMVGPTEPDFNATYPYAKAPLPLRSPRFCQVGCAHFFGPAPVNTTCKGICDVTFMHNTSVGFNDWAEKARLECRDGCDIALLRCQAGYYCTNGSMLPCPAGTYRET-------SYGAVTACTXXXXXXXXAATLGREVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDADGLAVCECITASSCEAMYDQ---------FQRESQPFIGRW 666
N + R+ GPT+ +P+A A P + FCQ+GC F+ P NTTCK +C+ + + +VG+ND AE+A+LEC+DGC+IAL CQAGYYC G MLPCPAGTYRE + T+CT + G+ XXXXXXXXXXXXXXXXXXXXXXXXXXXX G +C+CIT SC ++ D + RES PFIGRW
Sbjct: 38 NCVSADRLTGPTKMQQTKQHPWAMAAFPTKQKGFCQLGCQLFYTEVPKNTTCKRLCNYFYRYKITVGYNDLAEEAKLECQDGCEIALQVCQAGYYCDEGIMLPCPAGTYREPVTDVSILALEKATSCTKCPYGRYRSTNKGKSADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQRLCKCITPGSCGSIIDDNVVFSNGVDYYRESIPFIGRW 256
BLAST of mRNA_P-wetherbeei_contig16487.2.1 vs. uniprot
Match: A0A7S1TV74_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV74_9STRA) HSP 1 Score: 139 bits (351), Expect = 3.120e-37 Identity = 101/187 (54.01%), Postives = 121/187 (64.71%), Query Frame = 1
Query: 76 RMVGPTEPDFNATYPYAKAPLPLRSPRFCQVGCAHFFGPAPVNTTCKGICDVTFMHNTSVGFNDWAEKARLECRDGCDIALLRCQAGYYCTNGSMLPCPAGTYRETSYGAVTACTXXXXXXXXAATLGREVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDADGLAVCECITASSCEAMYDQFQ 636
R VGPT P +P+ AP P +FCQ GC+ FF PV T C+ CD + ++ +V +ND AE ARLECRDGC++ LLRCQAGYYCT GSML CP GTYR+ + AV AC + GR + XXXXXXXXXXXXXXXXXXXXXXXXXXXX GLA+C+CIT S + D +
Sbjct: 31 RPVGPTRPPNTRGHPWFPAPNPNPYLQFCQTGCSLFFESYPVLTDCQAECDRIYRYDVTVAYNDQAEVARLECRDGCEMGLLRCQAGYYCTAGSMLQCPIGTYRDVDFAAVEACVDCPRGRYRSDPRGRYLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLALCKCITTKSFVGVSDDIE 217
BLAST of mRNA_P-wetherbeei_contig16487.2.1 vs. uniprot
Match: A0A7S0XEG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEG6_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.130e-28 Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 1
Query: 58 NANATQRMVGPTEPDFNATYPYAKAPLPLRSPRFCQVGCAHFFGPAPVNTTCKGICDVTFMHNTSVGFNDWAEKARLECRDGCDIALLRCQAGYYCTNGSMLPCPAGTYRET 393
N N+ R+ GP +P T+P+ A P + FC++GC +FF N TC C + + + G++D AE A+LEC DGC+IAL CQAGYYC NG+M CPAG YRE+
Sbjct: 38 NCNSDDRLFGPIKPPDTRTHPWKVAQFPSTTTAFCKLGCQYFFSYYSNNNTCINQCKYQYRYQATTGYSDSAELAKLECLDGCNIALSICQAGYYCVNGNMTVCPAGKYRES 149
BLAST of mRNA_P-wetherbeei_contig16487.2.1 vs. uniprot
Match: A0A835ZBR7_9STRA (Ephrin_rec_like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR7_9STRA) HSP 1 Score: 109 bits (272), Expect = 4.990e-26 Identity = 90/188 (47.87%), Postives = 108/188 (57.45%), Query Frame = 1
Query: 112 TYPYAKAPLPLRSP--RFCQVGCAHFFGPAPVNTTCKGICDVTFMHNTSVGFNDWAEKARLECRDGCDIALLRCQAGYYCTNG-SMLPCPAGTYRETSYGAVTACTXXXXXXXXAATLGREVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDADGLAVCECITASSCEAMYDQFQRESQPFIGRW 666
T+PYA A + +FC+ GCA+F+ +P +C CD + TS +DWAEKARL+CRDGC I CQ GY C + M+ C GTYR S VT C A G + DXXXXXXXXXXXXXXXXXXXXXXXXXXX Y +G A C IT S + ES+PF+GRW
Sbjct: 18 THPYAVADATRLATLTQFCEAGCAYFYSSSPTLQSCDVNCDEMYRQRTSFNVSDWAEKARLDCRDGCRIGFRVCQPGYKCEHAHGMVECEPGTYRNASDADVTQCIACPAGHYREAPGGAGLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXLYTLVEGQAACANITYDSGNPEFQNLLNESEPFLGRW 205
BLAST of mRNA_P-wetherbeei_contig16487.2.1 vs. uniprot
Match: A0A7S1ZTF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZTF7_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.210e-22 Identity = 90/204 (44.12%), Postives = 114/204 (55.88%), Query Frame = 1
Query: 154 RFCQVGCAHFFGPA--PVNTT-CKGICDVTFMHNTSVGFNDWAEKARLECRDGCDIALLRCQAGYYC-------------------------TNGSMLPCPAGTYRETSYGAVTACTXXXXXXXXAATLGREVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDADGLAVCECITASSCE-----AMYDQFQRESQPFIGRW 666
+FC+VGC FF P++ + C CD + +N +VG+ND E +RLECRDGC +AL RCQ GY+C T G M CPAG YR+ SY A+ C T G+ + XXXXXXXXXXXXXXXXXXXXXXXXXXXX A C+CIT+ SC+ + + +RE+ P+IGRW
Sbjct: 98 KFCEVGCTLFFSSISDPMHLSECTHKCDQIYQYNITVGYNDLMEVSRLECRDGCQMALKRCQPGYFCSQVSLLNDDENSTLGPKSHGRDTRYTGGYMSHCPAGKYRDFSYDAIEMCVDCPPGRFREDTKGKSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFCKCITSDSCKKEQLPSPANSEKRETIPYIGRW 301
BLAST of mRNA_P-wetherbeei_contig16487.2.1 vs. uniprot
Match: A0A7S1FSZ0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FSZ0_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.350e-18 Identity = 85/200 (42.50%), Postives = 108/200 (54.00%), Query Frame = 1
Query: 154 RFCQVGCAHFFG----PAPVNTTCKGICDVTFMHNTSVGFNDWAEKARLECRDGCDIALLRCQAGYYC---------------------TNGSMLPCPAGTYRETSYGAVTACTXXXXXXXXAATLGREVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDADGLAVCECITASSCEAMY-----DQFQRESQPFIGR 663
R CQ+GC FF P +++ C +CD + +N +V +ND E RLECRDGC +AL+RCQ GY+C GSM C G+YR+ SY AV C T G + XXXXXXXXXXXXXXXXXXXXXXXXXXX + G VC+CIT +C+ D +R + P++GR
Sbjct: 230 RACQLGCTLFFSLRENPKQLSS-CLSLCDDKYAYNITVSYNDLMELVRLECRDGCHMALMRCQPGYFCLQPSTTLDDDGKHHLSSTSLPNGGSMHECLPGSYRDVSYHAVDTCVPCPPGRFREETRGLSMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFTTEPGRHVCKCITPQACDKEQLPDPADAEKRNTVPYVGR 428
BLAST of mRNA_P-wetherbeei_contig16487.2.1 vs. uniprot
Match: K0QZJ0_THAOC (Ephrin_rec_like domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZJ0_THAOC) HSP 1 Score: 92.4 bits (228), Expect = 3.530e-18 Identity = 67/183 (36.61%), Postives = 81/183 (44.26%), Query Frame = 1
Query: 4 ATEAQCVLDCASNVTTGINANATQRMVGPTEPDFNATYPY---AKAPLPLRS-PRFCQVGCAHFFGPAPVNTT----------CKGICDVTFMH-NTSVGFNDWAEKARLECRDGCDIALLRCQAGYYCTN------------GSMLPCPAGTYRETSYGAVTACTXXXXXXXXAATLGREVS 471
ATE QC +DC S+ T Q P T PY A A R P FC++GC +FF P + C C+ F + +T+ +ND ARLECRDGC +AL RCQ GYYC+ G M PCP GTYR+ YGAV AC GR S
Sbjct: 156 ATEEQCRIDCNSDDRTPTRPWHEQ---DPLRNALRLTRPYPYHAAADDDERDYPAFCRLGCNYFFVPESSDDPEDESKSTLDQCLERCEEEFEYTSTTPPYNDLVAIARLECRDGCLLALRRCQPGYYCSQVSFRDGNGTYAGGQMTPCPPGTYRDVDYGAVEACVPCPPNHFREDVKGRSAS 335
BLAST of mRNA_P-wetherbeei_contig16487.2.1 vs. uniprot
Match: A0A7S2SQ56_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQ56_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.490e-17 Identity = 54/137 (39.42%), Postives = 67/137 (48.91%), Query Frame = 1
Query: 61 ANATQRMVGPTEPDFNATYPY----AKAPLPLRSPRFCQVGCAHFFGPA--PVNTTCKGICDVTFMHNTSVGFNDWAEKARLECRDGCDIALLRCQAGYYC----TNG--------------SMLPCPAGTYRETSY 399
A A +R +GPT P +PY K P +FC+ GC F+ P N TCK C T+ + SVG ND A ARLEC DGCD+AL+RC+ GY C T G +M CP GT+R Y
Sbjct: 82 ALAGRRPIGPTRPSEPRDHPYFHAVGKDAWPNTYAKFCEAGCTFFYSEPEYPSNITCKQRCSSTYAYEGSVGENDMAMVARLECYDGCDLALMRCRPGYSCDWPSTTGLGAVDAAAGWTRTANMTACPLGTWRGVLY 218 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16487.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16487.2.1 >prot_P-wetherbeei_contig16487.2.1 ID=prot_P-wetherbeei_contig16487.2.1|Name=mRNA_P-wetherbeei_contig16487.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=223bp TATEAQCVLDCASNVTTGINANATQRMVGPTEPDFNATYPYAKAPLPLRSback to top mRNA from alignment at P-wetherbeei_contig16487:588..1256+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16487.2.1 ID=mRNA_P-wetherbeei_contig16487.2.1|Name=mRNA_P-wetherbeei_contig16487.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig16487:588..1256+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16487:588..1256+ >mRNA_P-wetherbeei_contig16487.2.1 ID=mRNA_P-wetherbeei_contig16487.2.1|Name=mRNA_P-wetherbeei_contig16487.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig16487:588..1256+ (Phaeothamnion wetherbeei SAG_119_79)back to top |