mRNA_P-wetherbeei_contig16455.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16455.1.1
Unique NamemRNA_P-wetherbeei_contig16455.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16455.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16455contigP-wetherbeei_contig16455:66..365 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FZE9
PFAMsABC2_membrane_3,ABC_tran
Model size301
Max annot lvl2759|Eukaryota
KEGG koko:K05643,ko:K05645
KEGG TC3.A.1.211
KEGG Pathwayko02010,map02010
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009653,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030587,GO:0031288,GO:0032502,GO:0033036,GO:0042623,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044464,GO:0048856,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0071702,GO:0090702,GO:0099120
Exons1
Evalue0.000388
EggNOG OGsCOG1131@1|root,KOG0059@2759|Eukaryota
DescriptionATPase activity, coupled to transmembrane movement of substances
Cds size300
COG categoryV
BRITEko00000,ko00001,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186087.557023-CDS-P-wetherbeei_contig16455:65..3651683186087.557023-CDS-P-wetherbeei_contig16455:65..365Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16455 66..365 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16455.1.1prot_P-wetherbeei_contig16455.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16455 66..365 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16455.1.1

>prot_P-wetherbeei_contig16455.1.1 ID=prot_P-wetherbeei_contig16455.1.1|Name=mRNA_P-wetherbeei_contig16455.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=100bp
RGLRRVFKNATGGAKTAVDGLDLTMYRGQVGRQYTSCLPQRSFFCRCAVF
RYTGTKVAYVWRSSSHSCSLPCPLFVLAHWTMAVMVDRLRLRKSKGDLP*
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mRNA from alignment at P-wetherbeei_contig16455:66..365-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16455.1.1 ID=mRNA_P-wetherbeei_contig16455.1.1|Name=mRNA_P-wetherbeei_contig16455.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=300bp|location=Sequence derived from alignment at P-wetherbeei_contig16455:66..365- (Phaeothamnion wetherbeei SAG_119_79)
CGGGGGCTGCGGCGGGTGTTCAAAAACGCGACGGGCGGCGCCAAAACGGC
GGTAGACGGCCTCGACTTGACCATGTATCGCGGGCAGGTCGGTCGGCAGT
ATACAAGCTGCCTGCCGCAGAGGAGTTTCTTTTGTAGATGCGCCGTTTTC
CGTTATACAGGGACTAAAGTGGCCTATGTGTGGCGTTCTAGCAGTCATTC
CTGCTCTTTACCATGTCCGCTCTTTGTGCTGGCTCATTGGACAATGGCAG
TTATGGTTGATAGACTTCGATTAAGAAAATCCAAGGGCGATCTGCCTTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16455:66..365-

>mRNA_P-wetherbeei_contig16455.1.1 ID=mRNA_P-wetherbeei_contig16455.1.1|Name=mRNA_P-wetherbeei_contig16455.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=300bp|location=Sequence derived from alignment at P-wetherbeei_contig16455:66..365- (Phaeothamnion wetherbeei SAG_119_79)
CGGGGGCTGCGGCGGGTGTTCAAAAACGCGACGGGCGGCGCCAAAACGGC
GGTAGACGGCCTCGACTTGACCATGTATCGCGGGCAGGTCGGTCGGCAGT
ATACAAGCTGCCTGCCGCAGAGGAGTTTCTTTTGTAGATGCGCCGTTTTC
CGTTATACAGGGACTAAAGTGGCCTATGTGTGGCGTTCTAGCAGTCATTC
CTGCTCTTTACCATGTCCGCTCTTTGTGCTGGCTCATTGGACAATGGCAG
TTATGGTTGATAGACTTCGATTAAGAAAATCCAAGGGCGATCTGCCTTAA
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