mRNA_P-wetherbeei_contig16435.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16435.1.1
Unique NamemRNA_P-wetherbeei_contig16435.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16435.1.1 vs. uniprot
Match: A0A7S0N0L8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N0L8_9CHLO)

HSP 1 Score: 251 bits (640), Expect = 7.210e-80
Identity = 135/235 (57.45%), Postives = 171/235 (72.77%), Query Frame = 1
Query:  106 WKKVLHGPPLEMFNWHRVVVDEYTYVELSRERDRTAIKRGLTGTHRWCLSGTPAIADFAGVKGMAEFLGAHLGVDDAPTAYKKEEQTGAEQFAYFRDKPTAAWHARRHALAQVFLDRFVRQNKAEIDEIPFTAHVLPVVLPPAERALYLELLHHLQAMDMKTKRSLRGN---AATHGDRESRLRKALGQADSPQEALLWCCSHFSLRGADVSAQAACTNVVDFRRRQMKDARKQL 801
            WK+ L  PPLEMF++ RVVVDE+TY+     RDR  +   L  T RW LSGTP +  FA VKG+A FLG HLGVD+AP  + K+EQT AE+F +FR+  T+AWHARRH LAQVFLDRFVRQN AEIDEIP+  H+  V LPPAERA+Y+EL HHLQAM+MKT ++++ +    A   D+E+RLR+ LG + +P+EALL  CSHF L GA  SA+AAC  VV  R  Q++D +K+L
Sbjct:   12 WKQ-LRCPPLEMFHFSRVVVDEFTYLS---GRDREMVLN-LKATFRWVLSGTPPVGGFADVKGIASFLGIHLGVDEAPP-FSKKEQTKAEKFHHFREMHTSAWHARRHQLAQVFLDRFVRQNVAEIDEIPWEEHIEAVTLPPAERAIYMELEHHLQAMEMKTVKAVKASNKRGAGESDKEARLREVLGASGTPEEALLKRCSHFDLAGAASSARAACEEVVAVREAQLEDCKKEL 240          
BLAST of mRNA_P-wetherbeei_contig16435.1.1 vs. uniprot
Match: A0A836CM92_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM92_9STRA)

HSP 1 Score: 251 bits (640), Expect = 9.690e-74
Identity = 136/272 (50.00%), Postives = 181/272 (66.54%), Query Frame = 1
Query:   37 RTAIADPWGLGKIGAGAGGGSSGWKKVLHGPPLEMFNWHRVVVDEYTYVELSRERDRTAIKRGLTGTHRWCLSGTPAIADFAGVKGMAEFLGAHLGVDDAPTAYKKEEQTGAEQFAYFRDKPTAAWHARRHALAQVFLDRFVRQNKAEIDEIPFTAHVLPVVLPPAERALYLELLHHLQAMDMKTKRSLRG-NAATHGDRESRLRKALGQADSPQEALLWCCSHFSLRGADVSAQAACTNVVDFRRRQMKDARKQLRRELRKATQLRTTALK 849
            + ++ DPWGL +I       +  W++ L  PPLEMF+W RVVVDE+TY+    ERDR+A++ G+T  HRWCLSGTP +  F  ++G+A FLG HLG D+ P    K+EQT AE+F +F++  T AWH RRH  AQ F+DRFVRQN AEIDEI    HV+P+ LPPAERA+YLEL HHLQAMDMK+K++++       GDRE+RLR  LG + S +EALL  C+HF L     SAQAAC  +V  R  Q  +   +L++ L +   +R   +K
Sbjct:  203 KRSVGDPWGLARIAREKR--ADVWRE-LASPPLEMFSWARVVVDEFTYLN---ERDRSAVQ-GMTAVHRWCLSGTPPVGSFDDIRGVAAFLGVHLGADEVPAL--KKEQTKAEKFRFFQEMHTPAWHLRRHLRAQAFMDRFVRQNIAEIDEIKAEEHVVPITLPPAERAIYLELDHHLQAMDMKSKKTIKSAKDVADGDREARLRSVLGASGSAEEALLKRCAHFDLEDNAKSAQAACEAIVALREGQRAECVAELKKVLAETYAMRAIVVK 465          
BLAST of mRNA_P-wetherbeei_contig16435.1.1 vs. uniprot
Match: A0A7S1I5D8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I5D8_9EUGL)

HSP 1 Score: 246 bits (627), Expect = 2.090e-70
Identity = 140/273 (51.28%), Postives = 177/273 (64.84%), Query Frame = 1
Query:    1 KKGKKAAGAGAARTAIADPWGL--GKIGAGAGGGSSGWKKVLHGPPLEMFNWHRVVVDEYTYVELSRERDRTAIKRGLTGTHRWCLSGTPAIADFAGVKGMAEFLGAHLGVDDAPTAYKKEEQTGAEQFAYFRDKPTAAWHARRHALAQVFLDRFVRQNKAEIDEIPFTAHVLPVVLPPAERALYLELLHHLQAMDMKTKRSLRGNAATHGDRESRLRKALGQADSPQEALLWCCSHFSLRGADVSAQAACTNVVDFRRRQMKDARKQLRREL 813
            KK K +AG  +      DPWGL  GK+          W   L  PPLE+F W RVVVDE+TY++   ERDR  +  GL  T RWCLSGTP  ++F  V+GMA FLG HLGV  A    K +E+T AE+F +F +  T AWHARRH +AQ F+DR+VRQN AEIDEI    H+  V L PAERA+YLEL HHLQA+DMK+K++++G     GDRESRLR  LG + S +EALL  CSH+ L G  VSA+AAC  +V  R++Q+     +LR E+
Sbjct: 1324 KKAKGSAGVPSKAKEEEDPWGLREGKV-------RDNWG-CLRCPPLELFAWARVVVDEFTYLQ---ERDREVVCSGLQATFRWCLSGTPPTSNFEDVRGMARFLGLHLGV--AEEKEKDKERTAAERFRFFHEVRTHAWHARRHVVAQQFMDRYVRQNIAEIDEIKAEEHLQQVTLTPAERAIYLELEHHLQAIDMKSKKTIKGRKGGEGDRESRLRSVLGASGSAEEALLKRCSHYDLDGNSVSAEAACQAIVACRQKQLDLCAAELRTEV 1583          
BLAST of mRNA_P-wetherbeei_contig16435.1.1 vs. uniprot
Match: A0A061RN12_9CHLO (Snf2 super family n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RN12_9CHLO)

HSP 1 Score: 226 bits (576), Expect = 1.440e-63
Identity = 118/233 (50.64%), Postives = 156/233 (66.95%), Query Frame = 1
Query:  106 WKKVLHGPPLEMFNWHRVVVDEYTYVELSRERDRTAIKRGLTGTHRWCLSGTPAIADFAGVKGMAEFLGAHLGVDDAPTAYKKEEQTGAEQFAYFRDKPTAAWHARRHALAQVFLDRFVRQNKAEIDEIPFTAHVLPVVLPPAERALYLELLHHLQAMDMKT-KRSLRGNAATHGDRESRLRKALGQADSPQEALLWCCSHFSLRGADVSAQAACTNVVDFRRRQMKDARKQL 801
            W+++L  PPLEMF W R+VVDE+TY+   +  D+ AI+ GL  + RW LSGTP    F  VKG+A FL  HLG +D    + K+EQT A+ F ++RD  T AWH RRH +AQ FLDRFVRQN AEIDEI    HV  V L P E+A+YLEL HHLQA+DMK+ +R +       GDR  RL+ ALG ++SP+EALL  CSHF L  +  SA  AC ++V+ R++Q+ + + +L
Sbjct: 1667 WREMLS-PPLEMFQWARLVVDEFTYL---KHHDKIAIQHGLKASCRWVLSGTPPHESFDDVKGIAAFLNIHLGCNDGTPMFTKKEQTKAQTFQFYRDFHTQAWHERRHRIAQSFLDRFVRQNIAEIDEIEQERHVNAVQLVPVEKAIYLELDHHLQALDMKSGRRKMWNRKGAGGDRAERLKAALGSSESPEEALLKRCSHFDLNSSAASALQACKDIVELRKQQLNECKAEL 1895          
BLAST of mRNA_P-wetherbeei_contig16435.1.1 vs. uniprot
Match: A0A0E9NFW2_SAICN (Uncharacterized protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NFW2_SAICN)

HSP 1 Score: 224 bits (571), Expect = 6.730e-63
Identity = 132/270 (48.89%), Postives = 171/270 (63.33%), Query Frame = 1
Query:   52 DPWGLGKIGAGAGGGSSGWKKVLHGPPLEMFNWHRVVVDEYTYVELSRERDRTAIKRGLTGTHRWCLSGTPAIADFAGVKGMAEFLGAHLGVDDAPTAYKKE--EQTGAEQFAYFRDKPTAAWHARRHALAQVFLDRFVRQNKAEIDEIPFTAHVLPVVLPPAERALYLELLHHLQAMDMKTKRSLRGNAATHGDRESRLRKALGQADSPQEALLWCCSHFSLRGADVSAQA--ACTNVVDFRRRQMKDARKQLRRELRKATQLRTTALK 849
            DPW LG            WK+ LH PPLEMF+W RVV+DEYTY+     R+  A+   +  + RW LSGTP + +F+ VK +A FLG  LG+DD     KK+  EQT AE+F  FRD  +A+WHARRH +AQ FLD+F+RQN AEIDEIP   H+  V LP AERA+YLEL H+LQA+DM  +R  +G  +THGDR++RL +ALG++ S +EALL  CSHF L   D    A  AC  +V  R  Q++D ++ L R L K       A+K
Sbjct: 1620 DPWKLGSA------AKKDWKQ-LHCPPLEMFHWKRVVIDEYTYLS---GREHAAVIH-MKASARWVLSGTPPVFNFSAVKSIAVFLGISLGIDDESDLSKKQKKEQTAAERFHAFRDARSASWHARRHEVAQAFLDQFMRQNVAEIDEIPTEYHLNRVTLPAAERAIYLELEHYLQALDMNIRR--KGKKSTHGDRDARLAEALGKSSSSEEALLKRCSHFDLDEKDDKENAIQACDIIVQERTGQLEDCKRDLLRILIKTKDAHKRAMK 1876          
BLAST of mRNA_P-wetherbeei_contig16435.1.1 vs. uniprot
Match: A0A409VU84_9AGAR (Helicase C-terminal domain-containing protein n=1 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409VU84_9AGAR)

HSP 1 Score: 214 bits (546), Expect = 1.500e-59
Identity = 125/262 (47.71%), Postives = 165/262 (62.98%), Query Frame = 1
Query:   34 ARTAIADPWGLGKIGAGAGGGSSGWKKVLHGPPLEMFNWHRVVVDEYTYVELSRERDRTAIKRGLTGTHRWCLSGTPAIADFAGVKGMAEFLGAHLGVDD------APTAYKKEEQTGAEQFAYFRDKPTAAWHARRHALAQVFLDRFVRQNKAEIDEIPFTAHVLPVVLPPAERALYLELLHHLQAMDMKTKRSLRGNAATHGDRESRLRKALGQADSPQEALLWCCSHFSLRGADVSAQAACTNVVDFRRRQMKDARKQL 801
            A+ A +DPW   K+G+ A  G   W   +H PP EMF++ RVVVDEYTY++        A+   LT   +W LSGTP I DFA +K +A FL  HLGVDD      A    ++ EQT  E+F  FR+  T  WHA RH + Q FLD+FVRQN AEIDEIP+TA V  ++LP AERA+YLEL HHL+++DM  KR  +    T  DRE RL ++LG++ S +EALL  CSHF L  ++ +A  AC  +V  R+RQ+   +K+L
Sbjct: 1624 AKRADSDPW---KLGSRAVQGE--WT-FMHAPPFEMFHFARVVVDEYTYLDGKVH----ALVTNLTADRQWVLSGTPPIHDFAALKTIAAFLNIHLGVDDDGEGQSAEVKKRRREQTSVERFHSFREVHTLQWHAHRHTIGQQFLDQFVRQNIAEIDEIPWTAKVETIILPAAERAIYLELEHHLRSLDMTIKRGKK----TESDREKRLAQSLGESKSAEEALLKRCSHFDLETSNENAMKACDVIVQERQRQLDQCKKEL 1871          
BLAST of mRNA_P-wetherbeei_contig16435.1.1 vs. uniprot
Match: A0A4V1Q4D0_9AGAR (Helicase ATP-binding domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4V1Q4D0_9AGAR)

HSP 1 Score: 210 bits (535), Expect = 4.460e-58
Identity = 128/277 (46.21%), Postives = 165/277 (59.57%), Query Frame = 1
Query:   37 RTAIADPWGLGKIGAGAGGGSSGWKKVLHGPPLEMFNWHRVVVDEYTYVELSRERDRTAIKRGLTGTHRWCLSGTPAIADFAGVKGMAEFLGAHLGVDD------APTAYKKEEQTGAEQFAYFRDKPTAAWHARRHALAQVFLDRFVRQNKAEIDEIPFTAHVLPVVLPPAERALYLELLHHLQAMDMKTKRSLRGNAATHGDRESRLRKALGQADSPQEALLWCCSHFSLRGADVSAQAACTNVVDFRRRQMKDARKQLRRELRKATQLRTTALK 849
            + A +DPW LG          S WK+ +H PP EMF++ R+V+DEYTY++        ++   LT   RW LSGTP I DFA VK +A FL  HLGVDD      A    ++ EQT +E+F  FR+  T  WHA RH + Q FLD+FVRQN AEIDEIP+      V LP AERA+YLEL HHL+A+DM  KR  +    T  DRE RL ++LG + S +EALL  CSHF L   + +A  AC  +V  R +Q  D   +LR+ + KA  +R  ALK
Sbjct: 1645 KRADSDPWKLGSRAV-----KSDWKE-MHAPPFEMFHFSRIVIDEYTYLDGKVH----SLITNLTAERRWVLSGTPPIHDFAAVKTIAAFLNIHLGVDDDGEGQSAEVKKRRREQTASERFHSFREVHTLEWHAHRHTVGQTFLDQFVRQNIAEIDEIPWNQEEEEVNLPAAERAIYLELEHHLRALDMTIKRGKK----TESDREKRLNESLGDSKSAEEALLKRCSHFDLETTNENAVKACDVIVQERTKQKDDCLTELRKAI-KAGIIREKALK 1906          
BLAST of mRNA_P-wetherbeei_contig16435.1.1 vs. uniprot
Match: A0A286UJC6_9AGAM (DNA repair rad8 n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286UJC6_9AGAM)

HSP 1 Score: 209 bits (532), Expect = 1.120e-57
Identity = 123/267 (46.07%), Postives = 165/267 (61.80%), Query Frame = 1
Query:   52 DPWGLGKIGAGAGGGSSGWKKVLHGPPLEMFNWHRVVVDEYTYVELSRERDRTAIKRGLTGTHRWCLSGTPAIADFAGVKGMAEFLGAHLGVDD------APTAYKKEEQTGAEQFAYFRDKPTAAWHARRHALAQVFLDRFVRQNKAEIDEIPFTAHVLPVVLPPAERALYLELLHHLQAMDMKTKRSLRGNAATHGDRESRLRKALGQADSPQEALLWCCSHFSLRGADV-SAQAACTNVVDFRRRQMKDARKQLRRELRKATQL 831
            DPW L           S WK+ +H PPLEMF++ R+V+DEYTY++        ++ + LT T RW LSGTP I DFA +K ++ FL  HLG+DD      A    ++ EQT  E+F  FR+  +  WHA RH L Q FLD+FVRQN AEIDEIP+   +  V LP AERA+YLEL HHL+A+DM  KR  +    T  DRE RL +ALG++ S +EALL  CSHF L   D  +A  AC  +V  R +Q++D +++L   L+KA ++
Sbjct: 1609 DPWKL------KSAAKSNWKQ-MHAPPLEMFHFTRLVIDEYTYLD----GKILSLVQKLTATRRWVLSGTPPIHDFAALKTISAFLDIHLGIDDDGEGSSAQVKKRRREQTDTEKFHSFREVHSLEWHAHRHQLGQKFLDQFVRQNIAEIDEIPWEEKIEQVNLPAAERAIYLELEHHLRALDMTIKRGRK----TESDREKRLAQALGESSSAEEALLKRCSHFDLDYKDEENAMKACEVIVQERTKQLEDCKRELVENLKKALKM 1860          
BLAST of mRNA_P-wetherbeei_contig16435.1.1 vs. uniprot
Match: A0A4Y7TFR9_9AGAR (DNA repair protein rad8 n=1 Tax=Coprinellus micaceus TaxID=71717 RepID=A0A4Y7TFR9_9AGAR)

HSP 1 Score: 209 bits (532), Expect = 1.120e-57
Identity = 125/263 (47.53%), Postives = 160/263 (60.84%), Query Frame = 1
Query:   37 RTAIADPWGLGKIGAGAGGGSSGWKKVLHGPPLEMFNWHRVVVDEYTYVELSRERDRTAIKRGLTGTHRWCLSGTPAIADFAGVKGMAEFLGAHLGVDD------APTAYKKEEQTGAEQFAYFRDKPTAAWHARRHALAQVFLDRFVRQNKAEIDEIPFTAHVLPVVLPPAERALYLELLHHLQAMDMKTKRSLRGNAATHGDRESRLRKALGQADSPQEALLWCCSHFSLRGADVS--AQAACTNVVDFRRRQMKDARKQL 801
            + A +DPW   K+G+ A  G   W + +  PP EMF+W RVVVDEYTY++        A+   LT    W LSGTP I DFA VK +A FL  HLGVDD      A    +K EQT  E+F  FR+  T  WHA RH + Q FLDRFVRQN AEIDEIP+ A    + LP AERA+YLEL HHL+A+DM  KR  +    T  DRE RL ++LG++ S +EALL  CSHF +  +D +  A  AC  +V  R++Q+ D + +L
Sbjct: 1630 KRAESDPW---KLGSAAVKGD--WTQ-MKAPPFEMFHWARVVVDEYTYLDGKIH----ALITNLTSERHWVLSGTPPIHDFAAVKTIAAFLNIHLGVDDDGEGRSAEVKKRKREQTAVERFHSFREVHTLEWHAHRHTVGQAFLDRFVRQNIAEIDEIPWDAEREEITLPAAERAIYLELEHHLRALDMTIKRGKK----TESDREKRLNQSLGESKSAEEALLKRCSHFDIEKSDKNDNAMKACDVIVQERQKQLDDCKTEL 1878          
BLAST of mRNA_P-wetherbeei_contig16435.1.1 vs. uniprot
Match: A0A0D2PHS1_HYPSF (Helicase ATP-binding domain-containing protein n=1 Tax=Hypholoma sublateritium (strain FD-334 SS-4) TaxID=945553 RepID=A0A0D2PHS1_HYPSF)

HSP 1 Score: 209 bits (532), Expect = 1.120e-57
Identity = 123/265 (46.42%), Postives = 162/265 (61.13%), Query Frame = 1
Query:   37 RTAIADPWGLGKIGAGAGGGSSGWKKVLHGPPLEMFNWHRVVVDEYTYVELSRERDRTAIKRGLTGTHRWCLSGTPAIADFAGVKGMAEFLGAHLGVDD------APTAYKKEEQTGAEQFAYFRDKPTAAWHARRHALAQVFLDRFVRQNKAEIDEIPFTAHVLPVVLPPAERALYLELLHHLQAMDMKTKRSLRGNAATHGDRESRLRKALGQADSPQEALLWCCSHFSLRGADVSAQAACTNVVDFRRRQMKDARKQLRREL 813
            + A +DPW LG     A    S W   +  PP EMF++ RVVVDEYTY++        A+   LT   +W LSGTP I DF  +K +A FL  HLGVDD      A    +K EQT  E+F  FR+  T  WHA RHA+ Q FL++FVRQN AEIDEIP+ A V  ++LP AERA+YLEL H+L+++DM  KR  +    T  DRE RL KALG + S +EALL  CSHF L  ++ +A  AC  +V  R++Q+ + +K+L R +
Sbjct: 1644 KRADSDPWKLG-----ARAVQSEWT-YMQAPPFEMFHFARVVVDEYTYLDGKVH----ALVTNLTAERQWVLSGTPPIHDFGALKTIAAFLNVHLGVDDDGEGRSAEVKKRKREQTAVERFHSFREVHTLQWHAHRHAIGQTFLNQFVRQNIAEIDEIPWDAKVEEIILPAAERAIYLELEHYLRSLDMTIKRGKK----TESDREKRLNKALGDSKSAEEALLKRCSHFDLETSNENAMKACDVIVRERQKQLDECKKELLRAI 1894          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16435.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0N0L8_9CHLO7.210e-8057.45Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A836CM92_9STRA9.690e-7450.00RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S1I5D8_9EUGL2.090e-7051.28Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A061RN12_9CHLO1.440e-6350.64Snf2 super family n=1 Tax=Tetraselmis sp. GSL018 T... [more]
A0A0E9NFW2_SAICN6.730e-6348.89Uncharacterized protein n=2 Tax=Saitoella complica... [more]
A0A409VU84_9AGAR1.500e-5947.71Helicase C-terminal domain-containing protein n=1 ... [more]
A0A4V1Q4D0_9AGAR4.460e-5846.21Helicase ATP-binding domain-containing protein n=1... [more]
A0A286UJC6_9AGAM1.120e-5746.07DNA repair rad8 n=1 Tax=Pyrrhoderma noxium TaxID=2... [more]
A0A4Y7TFR9_9AGAR1.120e-5747.53DNA repair protein rad8 n=1 Tax=Coprinellus micace... [more]
A0A0D2PHS1_HYPSF1.120e-5746.42Helicase ATP-binding domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16435contigP-wetherbeei_contig16435:385..1513 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog39416.CAZ81938
PFAMsDNA_methylase,Helicase_C,SNF2_N
Model size849
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.16e-57
EggNOG OGsCOG0553@1|root,KOG0298@2759|Eukaryota,39UHK@33154|Opisthokonta,3NTZ1@4751|Fungi,3QR5P@4890|Ascomycota
DescriptionDNA repair protein rad8
Cds size849
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186087.0341296-CDS-P-wetherbeei_contig16435:384..6601683186087.0341296-CDS-P-wetherbeei_contig16435:384..660Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16435 385..660 -
1683186087.0456202-CDS-P-wetherbeei_contig16435:940..15131683186087.0456202-CDS-P-wetherbeei_contig16435:940..1513Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16435 941..1513 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16435.1.1prot_P-wetherbeei_contig16435.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16435 385..1513 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16435.1.1

>prot_P-wetherbeei_contig16435.1.1 ID=prot_P-wetherbeei_contig16435.1.1|Name=mRNA_P-wetherbeei_contig16435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=283bp
KKGKKAAGAGAARTAIADPWGLGKIGAGAGGGSSGWKKVLHGPPLEMFNW
HRVVVDEYTYVELSRERDRTAIKRGLTGTHRWCLSGTPAIADFAGVKGMA
EFLGAHLGVDDAPTAYKKEEQTGAEQFAYFRDKPTAAWHARRHALAQVFL
DRFVRQNKAEIDEIPFTAHVLPVVLPPAERALYLELLHHLQAMDMKTKRS
LRGNAATHGDRESRLRKALGQADSPQEALLWCCSHFSLRGADVSAQAACT
NVVDFRRRQMKDARKQLRRELRKATQLRTTALK
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mRNA from alignment at P-wetherbeei_contig16435:385..1513-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16435.1.1 ID=mRNA_P-wetherbeei_contig16435.1.1|Name=mRNA_P-wetherbeei_contig16435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1129bp|location=Sequence derived from alignment at P-wetherbeei_contig16435:385..1513- (Phaeothamnion wetherbeei SAG_119_79)
AAGAAGGGCAAGAAGGCGGCCGGGGCGGGGGCGGCGCGCACAGCCATCGC GGACCCGTGGGGCCTCGGCAAGATCGGCGCCGGCGCCGGCGGCGGCAGCA GCGGCTGGAAGAAGGTGCTGCACGGCCCGCCGCTGGAGATGTTCAACTGG CACCGCGTCGTGGTGGACGAGTACACGTACGTCGAGCTCTCCAGGGAGCG CGACCGGACCGCCATTAAGCGCGGGCTGACGGGCACCCACCGCTGGTGCC TGTCGGGCACGCCTGCCATCGCGGACTTTGCGGGCGTCAAGGGCATGGCG GAGTTTCTCGGGGCGCACCTGGGCGTGGACGACGCGCCGACGGCGTACAA GAAGGAGGAGCAGACGGGGGCGGAGCAGTTCGCCTACTTCCGGGACAAGC CGACGGCGGCGTGGCACGCGCGGCGGCACGCGCTGGCGCAGGTCTTTCTG GACCGCTTTGTGCGGCAGAACAAGGCGGAGATCGACGAGATTCCCTTCAC GGCGCACGTGTTGCCGGTGGTGTTGCCGCCGGCGGAGCGGGCCCTTTACC TCGAGCTGCTGCACCATCTGCAGGTGAGATGAAAGAGAGAAAGAGAGGAG ATGTTAGATGTCAGTTGTTTGTTTATTTTTGGATGCAGAAGAGAGTAGAG TCGAATTTGGAATAGCTCTTCCAGCAAAGTGGTGTAAAACGGTATTTTTA CTGGCTTTGACTGGATTAAGCATCAGCTGCCGTTTTCGGGCTGACCAGCC AGCCGCCATGCTCAACCATATTGATAGCTGTTGGTTTGCTGTGGTCTTTC TTCTTTCCATGTCCCTCTGATTCTGCTGCCGGCGGTGTGCCGCATTCGTG CAGGCGATGGACATGAAGACAAAGCGGTCGCTGCGGGGCAACGCCGCCAC GCACGGCGACCGCGAGTCGCGGCTGCGCAAAGCCCTCGGCCAGGCCGACT CGCCGCAGGAGGCGCTACTGTGGTGCTGCTCGCACTTCAGCCTGCGCGGT GCCGACGTCAGCGCCCAGGCGGCCTGCACCAATGTAGTCGACTTCCGGCG CCGGCAGATGAAGGACGCGCGCAAGCAGCTGCGGCGCGAGCTGCGCAAGG CCACCCAGTTGCGAACGACGGCGCTGAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16435:385..1513-

>mRNA_P-wetherbeei_contig16435.1.1 ID=mRNA_P-wetherbeei_contig16435.1.1|Name=mRNA_P-wetherbeei_contig16435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig16435:385..1513- (Phaeothamnion wetherbeei SAG_119_79)
AAGAAGGGCAAGAAGGCGGCCGGGGCGGGGGCGGCGCGCACAGCCATCGC
GGACCCGTGGGGCCTCGGCAAGATCGGCGCCGGCGCCGGCGGCGGCAGCA
GCGGCTGGAAGAAGGTGCTGCACGGCCCGCCGCTGGAGATGTTCAACTGG
CACCGCGTCGTGGTGGACGAGTACACGTACGTCGAGCTCTCCAGGGAGCG
CGACCGGACCGCCATTAAGCGCGGGCTGACGGGCACCCACCGCTGGTGCC
TGTCGGGCACGCCTGCCATCGCGGACTTTGCGGGCGTCAAGGGCATGGCG
GAGTTTCTCGGGGCGCACCTGGGCGTGGACGACGCGCCGACGGCGTACAA
GAAGGAGGAGCAGACGGGGGCGGAGCAGTTCGCCTACTTCCGGGACAAGC
CGACGGCGGCGTGGCACGCGCGGCGGCACGCGCTGGCGCAGGTCTTTCTG
GACCGCTTTGTGCGGCAGAACAAGGCGGAGATCGACGAGATTCCCTTCAC
GGCGCACGTGTTGCCGGTGGTGTTGCCGCCGGCGGAGCGGGCCCTTTACC
TCGAGCTGCTGCACCATCTGCAGGCGATGGACATGAAGACAAAGCGGTCG
CTGCGGGGCAACGCCGCCACGCACGGCGACCGCGAGTCGCGGCTGCGCAA
AGCCCTCGGCCAGGCCGACTCGCCGCAGGAGGCGCTACTGTGGTGCTGCT
CGCACTTCAGCCTGCGCGGTGCCGACGTCAGCGCCCAGGCGGCCTGCACC
AATGTAGTCGACTTCCGGCGCCGGCAGATGAAGGACGCGCGCAAGCAGCT
GCGGCGCGAGCTGCGCAAGGCCACCCAGTTGCGAACGACGGCGCTGAAG
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