prot_P-wetherbeei_contig952.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig952.2.1
Unique Nameprot_P-wetherbeei_contig952.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length169
Homology
BLAST of mRNA_P-wetherbeei_contig952.2.1 vs. uniprot
Match: A0A835ZJ03_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ03_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.990e-21
Identity = 61/168 (36.31%), Postives = 91/168 (54.17%), Query Frame = 0
Query:   16 MRKGRPSQRVRPS---GGSADKPKPLSAKWLEVCQ-ETDIKPGEGATKAIATKVQGKEFLFVLVRHADKVYAISESCGKCKFPLIDG---------------TLVETEASQIKCPLCGQTFSLSSGKQGALLGPPGWMQGIVSGIMAKGEVNDIKAYETKVTLSGQVL 164
            MRKGR S R   +   G  A K    +A WL+V   + ++   +G+TK +  K  G +  F+LVR   K+Y +SESCG+CKFPL D                T  +  A  + CPLCG T+   +G++GA+    G ++   +G+MA+ E  D++AYET+VT  G V+
Sbjct:    1 MRKGRKSPRKMLNELKGPGAAKSVDANATWLQVLNTDKEVGAEQGSTKLVNGKYAGDDLYFLLVRWGGKMYTVSESCGRCKFPLTDAKXXXXXXXXXXXXKITSGDGGAPIMTCPLCGATYDARTGERGAIASQGG-LKDAFAGMMAQKEPKDLRAYETRVTPDGAVV 167          
BLAST of mRNA_P-wetherbeei_contig952.2.1 vs. uniprot
Match: D7G2Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Z6_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.200e-15
Identity = 52/162 (32.10%), Postives = 87/162 (53.70%), Query Frame = 0
Query:   28 SGGSADKPKPLS--AKWLEVCQET-DIKPGEGATKAIATKVQGKEFLFVLVRHADKVYAISESCGKCKFPLIDGTL---------------VETEASQ---IKCPLCGQTFSLSSGKQGALLGPPGWMQGIVSGIMAKGEVNDIKAYETKVTLSGQVLVRIE 168
            S GS  +P   +  AKWL+V   T +++PG  + K ++ K +G++ +F L  +    YA+SE+CG+CKFPLI+G +               VE +      I CPLCG  F+L +G+      P G  Q +VS ++++     I  ++ +V  +G V+VR++
Sbjct:   59 SSGSKQQPSGATSNAKWLQVLDSTSELEPG--SVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGGKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGEIAGEQ-PKGLAQVLVSKVVSQTPAESITTHQAQVLSTGAVVVRVD 217          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig952.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZJ03_9STRA1.990e-2136.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G2Z6_ECTSI2.200e-1532.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012748Rieske-like [2Fe-2S] domain, NirD-typePFAMPF13806Rieske_2coord: 41..165
e-value: 3.8E-11
score: 42.8
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 39..168
e-value: 1.7E-13
score: 52.3
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 41..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availablePANTHERPTHR21496FERREDOXIN-RELATEDcoord: 39..167
NoneNo IPR availablePANTHERPTHR21496:SF223-PHENYLPROPIONATE/CINNAMIC ACID DIOXYGENASE FERREDOXIN SUBUNITcoord: 39..167
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 43..132
score: 10.444113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig952contigP-wetherbeei_contig952:4609..5115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig952.2.1mRNA_P-wetherbeei_contig952.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig952 4609..5115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig952.2.1 ID=prot_P-wetherbeei_contig952.2.1|Name=mRNA_P-wetherbeei_contig952.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp
MTATRTCSSRAHDLSMRKGRPSQRVRPSGGSADKPKPLSAKWLEVCQETD
IKPGEGATKAIATKVQGKEFLFVLVRHADKVYAISESCGKCKFPLIDGTL
VETEASQIKCPLCGQTFSLSSGKQGALLGPPGWMQGIVSGIMAKGEVNDI
KAYETKVTLSGQVLVRIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012748Rieske-like_NirD
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S