prot_P-wetherbeei_contig944.2.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig944.2.2
Unique Nameprot_P-wetherbeei_contig944.2.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length145
Homology
BLAST of mRNA_P-wetherbeei_contig944.2.2 vs. uniprot
Match: A0A836C8I8_9STRA (ClpS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I8_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.790e-47
Identity = 80/135 (59.26%), Postives = 107/135 (79.26%), Query Frame = 0
Query:   11 RAVPVALAPGTKVGKSKVSLGRAIPQIAQPKTEAAQATKAXXXXXPKQKQQTEEEEVPMFKVILLGDEGYERAHVVMSLQ-IVPDTDNVRAAEIYDEAQTTGKGLCGIYPEEHAELYVQQLTRAEPMIFADLEPE 144
            R+  VALAPG+KVGK+KV L +++  +AQPK EA +A        PKQ++ TE E+ PM+KV+LLGDEGYER HV+M++Q I+P+TDN ++ EI++EAQ TG G+CG++PEEHAELYVQQ TR EPMI+AD+E E
Sbjct:   17 RSPTVALAPGSKVGKAKVQLQKSL-SLAQPKEEAQKAATDGAKAKPKQRRVTESEDCPMYKVLLLGDEGYEREHVIMAIQDIIPETDNKKSTEIFEEAQKTGTGMCGVFPEEHAELYVQQFTRCEPMIYADMEEE 150          
BLAST of mRNA_P-wetherbeei_contig944.2.2 vs. uniprot
Match: D8LIM3_ECTSI (ClpS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIM3_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 4.290e-37
Identity = 78/129 (60.47%), Postives = 96/129 (74.42%), Query Frame = 0
Query:   17 LAPGTKVGKSKVSLGRAIPQIAQPKTEAAQATKAXXXXXPKQKQQTEEEEVPMFKVILLGDEGYERAHVVMSLQ-IVPDTDNVRAAEIYDEAQTTGKGLCGIYPEEHAELYVQQLTRAEPMIFADLEPE 144
            LAPG KVG++KVSL RA+  +A PK+E+A     XXXXX       E+   PMF+V+++GDE Y R HVVMS+Q IVPDTDN RAAEI++EAQ  GKG CG YPEE AELYV+Q TR EP+I+AD+E E
Sbjct:   74 LAPGGKVGRAKVSLERAVTSVAAPKSESAXXXXXXXXXXXXXXXXXED--APMFQVLVIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEGGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKE 200          
BLAST of mRNA_P-wetherbeei_contig944.2.2 vs. uniprot
Match: A0A7R9Z7A9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z7A9_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.670e-22
Identity = 49/120 (40.83%), Postives = 76/120 (63.33%), Query Frame = 0
Query:   37 IAQPKTEAAQATKAXXXXXPKQKQQTEE-----------EEVPMFKVILLGDEGYERAHVVMSL-QIVPDTDNVRAAEIYDEAQTTGKGLCGIYPEEHAELYVQQLTRAEPMIFADLEPE 144
            IA+PK +  QA K       K K++              E+ P++K++LLGDE Y++AHV+  +  ++ D D  +A+ I+D+AQ +GK +CG YP EHAE+Y +QL R++PMI++DLE E
Sbjct:    4 IAKPKVQTKQAVKTETRRKEKSKRRVRASDPISRRDEKFEDAPLYKLMLLGDEEYDQAHVIERMCALLEDMDEDQASTIFDQAQISGKAMCGKYPYEHAEMYKEQLARSDPMIYSDLEEE 123          
BLAST of mRNA_P-wetherbeei_contig944.2.2 vs. uniprot
Match: A0A7S0ZCQ5_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCQ5_9RHOD)

HSP 1 Score: 94.4 bits (233), Expect = 1.240e-21
Identity = 56/128 (43.75%), Postives = 79/128 (61.72%), Query Frame = 0
Query:   17 LAPGTKVGKSKVSLGRAIPQIAQPKTEAAQATKAXXXXXPKQKQQTEEEEVPMFKVILLGDEGYERAHVVMSLQIVPDTDNVRAAEIYDEAQTTGKGLCGIYPEEHAELYVQQLTRAEPMIFADLEPE 144
            LAPG KVGK KVS+ + + ++++P  E  +A         K +++TE+EE+P FKVILLGDEGY+  HVV  L  +   +   AA ++  AQ TG  +  +  EE AE YVQQL R E  I+A +EP+
Sbjct:   46 LAPGVKVGKPKVSVSKDMKRLSEPVKEP-EADPNAGSAKAKPRRKTEQEEIPKFKVILLGDEGYDEVHVVTQLVKIVQLEKNEAARVFGVAQATGSEIVCVVNEEQAEFYVQQLKRQE--IYALMEPD 170          
BLAST of mRNA_P-wetherbeei_contig944.2.2 vs. uniprot
Match: A0A7R9WV01_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WV01_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 7.840e-21
Identity = 53/126 (42.06%), Postives = 76/126 (60.32%), Query Frame = 0
Query:   20 GTKVGKSKVSLGRAIPQIAQPKTEAAQATKAXXXXXPKQKQQTEEEEVPMFKVILLGDEGYERAHVVMSL-QIVPDTDNVRAAEIYDEAQTTGKGLCGIYPEEHAELYVQQLTRAEPMIFADLEPE 144
            G  + K  V + +    +A+ K +  Q  K      P  +++ E E+ PMFK++LLGD+GY+  HVV  L  IV D D  +AAE+  +A   GK +CG YP E AEL+ +QL R++PMIF+DLE E
Sbjct:   51 GAALAKPDVKIAQKTETVAKEKIKQKQKAKTHD---PISRRKDEFEDAPMFKLMLLGDDGYDAMHVVDRLCAIVDDIDEGQAAEVLQQANMAGKAMCGKYPFERAELFKEQLLRSDPMIFSDLEEE 173          
BLAST of mRNA_P-wetherbeei_contig944.2.2 vs. uniprot
Match: A0A5J4Z5M8_PORPP (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5M8_PORPP)

HSP 1 Score: 88.6 bits (218), Expect = 2.810e-19
Identity = 50/118 (42.37%), Postives = 69/118 (58.47%), Query Frame = 0
Query:   17 LAPGTKVGKSKVSLGRAIPQIAQPKTEAAQATKAXXXXXPKQKQQTEEEEVPMFKVILLGDEGYERAHVVMSLQIVPDTDNVRAAEIYDEAQTTGKGLCGIYPEEHAELYVQQLTRAE 134
            LAPG KVG+ K S+ +   ++ + K+   QA  A      K +++TE EE+PM+KVILLGDE Y+  HVV  L  +   + + A  I+  AQ TG  +  +  EE AE YVQQL R E
Sbjct:   55 LAPGIKVGRPKTSIQKDTGRMTETKSPEPQADAAAGASRAKPRRETEMEEIPMYKVILLGDEEYDEVHVVTQLMKIVQLEQIEATRIFGVAQATGSEIVVVVNEELAEFYVQQLKRQE 172          
BLAST of mRNA_P-wetherbeei_contig944.2.2 vs. uniprot
Match: A0A7S2PG26_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PG26_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.460e-19
Identity = 49/128 (38.28%), Postives = 80/128 (62.50%), Query Frame = 0
Query:   20 GTKVGKSKVSLGR--AIPQIAQPKTEAAQATKAXXXXXPKQKQQTEEEEVPMFKVILLGDEGYERAHVVMSL-QIVPDTDNVRAAEIYDEAQTTGKGLCGIYPEEHAELYVQQLTRAEPMIFADLEPE 144
            G    K K+ +G+  A+ Q    K+E  Q  KA     P ++++ + E+ P++KV+L+GDE Y++ H +  +  I+ D D  +AA ++ +AQ  GK +   YP EHAELYV+QL R++PMIF++L+ E
Sbjct:   58 GAAPAKPKIEIGQKTAVTQKVGQKSEVKQTHKAKVAE-PVKRREHKTEDAPLYKVMLIGDEEYDQTHTIERICDIMEDVDEGQAASVFTQAQNGGKAMIAKYPFEHAELYVEQLLRSDPMIFSELQEE 184          
BLAST of mRNA_P-wetherbeei_contig944.2.2 vs. uniprot
Match: A0A7S0L192_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L192_9EUKA)

HSP 1 Score: 86.3 bits (212), Expect = 1.960e-18
Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 0
Query:   65 EEVPMFKVILLGDEGYERAHVVMSL-QIVPDTDNV-RAAEIYDEAQTTGKGLCGIYPEEHAELYVQQLTRAEPMIFADLEPE 144
            E++PM+KVILLGDE YE   V  +L +++P+  NV +A E Y EA+ TGK L  + P+EHAELY +QL R EPMIFAD+E E
Sbjct:   95 EDMPMWKVILLGDEEYEEQPVCEALVRVIPELSNVMQAKERYREAEQTGKALLIVAPQEHAELYKEQLAREEPMIFADIEEE 176          
BLAST of mRNA_P-wetherbeei_contig944.2.2 vs. uniprot
Match: A0A7S2VFC1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VFC1_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.450e-18
Identity = 41/90 (45.56%), Postives = 61/90 (67.78%), Query Frame = 0
Query:   56 PKQKQQTEEEEVPMFKVILLGDEGYERAHVVMSL-QIVPDTDNVRAAEIYDEAQTTGKGLCGIYPEEHAELYVQQLTRAEPMIFADLEPE 144
            P  ++  E ++ PM+K++LL D+GY+  HVV  +  IV D D  +AA ++ +A   GK +CG +P E AEL+ +QL R++PMIFADLE E
Sbjct:   12 PVSRRDEEFQDAPMYKLMLLSDDGYDGEHVVTRMCAIVDDMDEDQAATVFQQAMQNGKAMCGKFPFERAELFKEQLVRSDPMIFADLEEE 101          
BLAST of mRNA_P-wetherbeei_contig944.2.2 vs. uniprot
Match: B7FSL9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSL9_PHATC)

HSP 1 Score: 85.5 bits (210), Expect = 3.160e-18
Identity = 46/110 (41.82%), Postives = 69/110 (62.73%), Query Frame = 0
Query:   36 QIAQPKTEAAQATKAXXXXXPKQKQQTEEEEVPMFKVILLGDEGYERAHVVMSL-QIVPDTDNVRAAEIYDEAQTTGKGLCGIYPEEHAELYVQQLTRAEPMIFADLEPE 144
            Q+   K E  Q +K      P QK+  + ++ PM+K++LL D+GY+  HV+  +  I+ D D   AA ++ +AQ +GK +CG YP E AEL+ +QL R+ PMIF+DLE E
Sbjct:   57 QVXXXKQEVIQKSKVSTGD-PVQKRDEDFQDAPMYKLMLLADDGYDGEHVITRMCAILEDMDEDAAATVFKQAQQSGKAMCGKYPFERAELFKEQLVRSTPMIFSDLEEE 165          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig944.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8I8_9STRA2.790e-4759.26ClpS domain-containing protein n=1 Tax=Tribonema m... [more]
D8LIM3_ECTSI4.290e-3760.47ClpS domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7R9Z7A9_9STRA5.670e-2240.83Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0ZCQ5_9RHOD1.240e-2143.75Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7R9WV01_9STRA7.840e-2142.06Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A5J4Z5M8_PORPP2.810e-1942.37ATP-dependent Clp protease adapter protein ClpS n=... [more]
A0A7S2PG26_9STRA3.460e-1938.28Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S0L192_9EUKA1.960e-1856.10Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2VFC1_9STRA2.450e-1845.56Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B7FSL9_PHATC3.160e-1841.82Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 41..140
e-value: 8.7E-16
score: 59.4
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 64..133
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 66..132
e-value: 1.3E-9
score: 37.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig944contigP-wetherbeei_contig944:4528..5551 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig944.2.2mRNA_P-wetherbeei_contig944.2.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig944 4528..5551 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig944.2.2 ID=prot_P-wetherbeei_contig944.2.2|Name=mRNA_P-wetherbeei_contig944.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp
AAPTAAEGRRRAVPVALAPGTKVGKSKVSLGRAIPQIAQPKTEAAQATKA
AQAAKPKQKQQTEEEEVPMFKVILLGDEGYERAHVVMSLQIVPDTDNVRA
AEIYDEAQTTGKGLCGIYPEEHAELYVQQLTRAEPMIFADLEPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014719Ribosomal_L7/12_C/ClpS-like
IPR003769ClpS_core