prot_P-wetherbeei_contig9392.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9392.2.1
Unique Nameprot_P-wetherbeei_contig9392.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length159
Homology
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BLAST of mRNA_P-wetherbeei_contig9392.2.1 vs. uniprot
Match: A0A833QHP5_9POAL (Protein FAR1-RELATED SEQUENCE n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QHP5_9POAL)

HSP 1 Score: 53.1 bits (126), Expect = 3.670e-5
Identity = 34/127 (26.77%), Postives = 52/127 (40.94%), Query Frame = 0 
Query:    5 AFTNHEDTAAFTWIFKHFKEACCPRDATGKPIEPVTIITDADPAAAAGVRAELPNSKHFLCSWHFMMNVNKHASEAWGGXXXXXSKKEGGDVTEESTDKMEFLRLFKKAMYST-SEAAFDGHWATLM 130
            AF  +E   ++ W+F+ F E+            P ++ TD +PAAA  +   LP+++H LC WH + N+  H                       S     F  LF K M    SE  F+  WA ++
Sbjct:  339 AFLLNESVESYEWLFRSFVESMGGH-------APKSLFTDQNPAAAKAIENVLPDTRHCLCQWHVLKNMESHLGT--------------------SNMSRTFQTLFTKCMNGCESEMEFEETWARMV 438
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9392.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A833QHP5_9POAL3.670e-526.77Protein FAR1-RELATED SEQUENCE n=1 Tax=Carex little... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 2..72
e-value: 2.1E-10
score: 40.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9392contigP-wetherbeei_contig9392:1831..2560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9392.2.1mRNA_P-wetherbeei_contig9392.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9392 1831..2560 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9392.2.1 ID=prot_P-wetherbeei_contig9392.2.1|Name=mRNA_P-wetherbeei_contig9392.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=159bp
SVAQAFTNHEDTAAFTWIFKHFKEACCPRDATGKPIEPVTIITDADPAAA
AGVRAELPNSKHFLCSWHFMMNVNKHASEAWGGGGGKRSKKEGGDVTEES
TDKMEFLRLFKKAMYSTSEAAFDGHWATLMGWEGLSQKPKLVAHLKRLHR
DRHRWAFYC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018289MULE_transposase_dom