prot_P-wetherbeei_contig936.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig936.1.2
Unique Nameprot_P-wetherbeei_contig936.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length301
Homology
BLAST of mRNA_P-wetherbeei_contig936.1.2 vs. uniprot
Match: A0A836CMW4_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW4_9STRA)

HSP 1 Score: 367 bits (941), Expect = 1.170e-124
Identity = 192/293 (65.53%), Postives = 231/293 (78.84%), Query Frame = 0
Query:   12 AILVPGQLVSAEPGFLRGHGTYTAESEEGTS-QLVASVAGVVESINKLITVRPVKSRYIGEVGDLVVGRITDVANKRWKVDLRAHKDAVLALSSVNLPGGVQRIRTYEDQLQMRTFYAENDLISAEVQQIMNDGSIALHTRSLKYGKLENGQLLVVPQVLVRRLRQHNVSL--PVGVDVILGTNGYIWITRSIPQEWKEQGRESEGDGM----VTSESEALMRQRRLHAETPIQRSDRELICRVRNSICALRHVLAFISAESIMHVYRESERLGLEPKDMLQDDSIWRLTEAL 297
            +I+VPGQ+++AE GFLRGHGTY  ESE+G   QL+A VAGVVE +NKLI+VRPVKSRYIGEVGDLVVGR+T+V  KRWKVD+  H+DA+L LSSVNLPGG QR RTYEDQLQMRTF+ ENDLISAEVQQI  DGSI LHTRSLKYGKLENGQLL VPQVLV+RL+QH ++L  P+GVDV+LGTNG +WITR++P EW   G  SEG  M    +TS++E LM+ RRLHAETPI R +RE ICRVRN++  L+H  A I+ ++I  VY  S   G+  KDMLQ +++  L   L
Sbjct:    3 SIVVPGQVITAEGGFLRGHGTYIQESEDGGEPQLIACVAGVVERVNKLISVRPVKSRYIGEVGDLVVGRVTEVGGKRWKVDVGGHQDAILMLSSVNLPGGAQRKRTYEDQLQMRTFFKENDLISAEVQQIQQDGSIVLHTRSLKYGKLENGQLLRVPQVLVKRLKQHFITLAPPIGVDVVLGTNGRVWITRAMPAEWT--GGTSEGADMDTNVLTSKAETLMQLRRLHAETPILRDERERICRVRNAVVTLQHAFALITPDAIAAVYARSVEAGMAAKDMLQAEALASLMPQL 293          
BLAST of mRNA_P-wetherbeei_contig936.1.2 vs. uniprot
Match: A0A6H5KMR3_9PHAE (Ribosomal RNA-processing protein 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR3_9PHAE)

HSP 1 Score: 345 bits (885), Expect = 4.010e-116
Identity = 181/286 (63.29%), Postives = 225/286 (78.67%), Query Frame = 0
Query:   13 ILVPGQLVSAEPGFLRGHGTYTAESEEG-TSQLVASVAGVVESINKLITVRPVKSRYIGEVGDLVVGRITDVANKRWKVDLRAHKDAVLALSSVNLPGGVQRIRTYEDQLQMRTFYAENDLISAEVQQIMNDGSIALHTRSLKYGKLENGQLLVVPQVLVRRLRQHNVSLP-VGVDVILGTNGYIWITRSIPQEWK--EQGRESEGDGMVTSESEALMRQRRLHAETPIQRSDRELICRVRNSICALRHVLAFISAESIMHVYRESERLGLEPKDMLQDDSIWRLT 294
            I+VPGQ +++  G+LRGHGTY  E  +G   +L+A VAGVVE +NKLI+VRP+KSRYIGEVGDLVVGR+ +V +KRW V++ AH+ AVL LSSVNLPGG QRIRTYEDQLQMR+F+ E+DLISAEVQQ+ +DG IALHTRSLKYGKLENGQL+ VP VL+RRL+QH VSLP  GVDVILGTNG +WI+R+ P+EWK  E+G ++ G G V  ++E L RQR+ HAET      R  ICRVRN+I ALR+V   ++ ESIM VYR S  +GL+PKDML  +++  LT
Sbjct:    8 IVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVAEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRIRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEG-DAAGTGSVAPKAETLTRQRKQHAETETIGEVRTNICRVRNAIVALRNVFHLVTPESIMSVYRRSVTMGLQPKDMLSGEAVLALT 292          
BLAST of mRNA_P-wetherbeei_contig936.1.2 vs. uniprot
Match: D8LIC3_ECTSI (Ribosomal RNA-processing protein 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC3_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 4.390e-97
Identity = 152/227 (66.96%), Postives = 188/227 (82.82%), Query Frame = 0
Query:   13 ILVPGQLVSAEPGFLRGHGTYTAESEEG-TSQLVASVAGVVESINKLITVRPVKSRYIGEVGDLVVGRITDVANKRWKVDLRAHKDAVLALSSVNLPGGVQRIRTYEDQLQMRTFYAENDLISAEVQQIMNDGSIALHTRSLKYGKLENGQLLVVPQVLVRRLRQHNVSLP-VGVDVILGTNGYIWITRSIPQEWK--EQGRESEGDGMVTSESEALMRQRRLHAET 235
            I+VPGQ +++  G+LRGHGTY  E  +G   +L+A VAGVVE +NKLI+VRP+KSRYIGEVGDLVVGR+T+V +KRW V++ AH+ AVL LSSVNLPGG QR+RTYEDQLQMR+F+ E+DLISAEVQQ+ +DG IALHTRSLKYGKLENGQL+ VP VL+RRL+QH VSLP  GVDVILGTNG +WI+R+ P+EWK  E+G ++ G G V  ++E L RQR+ HAET
Sbjct:    8 IVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEG-DAAGTGSVAPKAETLTRQRKQHAET 233          
BLAST of mRNA_P-wetherbeei_contig936.1.2 vs. uniprot
Match: A0A1V9YVZ5_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVZ5_9STRA)

HSP 1 Score: 287 bits (734), Expect = 2.070e-93
Identity = 149/265 (56.23%), Postives = 194/265 (73.21%), Query Frame = 0
Query:   13 ILVPGQLVSAEPGFLRGHGTYTAESEEGTSQLVASVAGVVESINKLITVRPVKSRYIGEVGDLVVGRITDVANKRWKVDLRAHKDAVLALSSVNLPGGVQRIRTYEDQLQMRTFYAENDLISAEVQQIMNDGSIALHTRSLKYGKLENGQLLVVPQVLVRRLRQHNVSLPVGVDVILGTNGYIWITRSIPQEWKEQGRESEGDGMVTSESEALM--RQRRLHAETPIQRSDRELICRVRNSICALRHVLAFISAESIMHVYRESE 275
            ++ PGQ++S+EPGFLRGHGTY    E     L+ASVAGVVE +N+L++VRP+ SRYIGEVGD+VVGRI++V +KRWKVD+   +DAVL LSSVNLPGG QR RTYEDQLQMR+F+ E +LISAEVQ++  DG++ LHTRSL+YGKLENGQL+VV   LV+RL+QH + LP+G+DVILG NGYIWI+RSI         E + + + T+ES A +   ++  HA+TP    DR+ I +V N I  L      I+ ESIM +Y   +
Sbjct:   31 VVTPGQVISSEPGFLRGHGTYVENGE-----LLASVAGVVEKVNQLVSVRPLVSRYIGEVGDIVVGRISEVGSKRWKVDINGQQDAVLMLSSVNLPGGAQRRRTYEDQLQMRSFFEECELISAEVQEVRYDGTMWLHTRSLRYGKLENGQLIVVQPALVKRLKQHMLQLPIGIDVILGCNGYIWISRSI---------EHDSESLTTNESRADVWTERKATHAQTPTSAIDRKTIAKVYNVISTLNANFKTITPESIMEMYNHQD 281          
BLAST of mRNA_P-wetherbeei_contig936.1.2 vs. uniprot
Match: A0A8K1FMX9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMX9_PYTOL)

HSP 1 Score: 284 bits (726), Expect = 5.170e-92
Identity = 149/267 (55.81%), Postives = 192/267 (71.91%), Query Frame = 0
Query:    9 GRPAILVPGQLVSAEPG-FLRGHGTYTAESEEGTSQLVASVAGVVESINKLITVRPVKSRYIGEVGDLVVGRITDVANKRWKVDLRAHKDAVLALSSVNLPGGVQRIRTYEDQLQMRTFYAENDLISAEVQQIMNDGSIALHTRSLKYGKLENGQLLVVPQVLVRRLRQHNVSLP-VGVDVILGTNGYIWITRSIPQEWKEQGRESEGDGMVTSESEALMRQRRLHAETPIQRSDRELICRVRNSICALRHVLAFISAESIMHVYRE 273
            G   ++ PG+++S E G FLRGHGTY + +E     L+ASVAGVVE +N+LITVRP+ SRYIGEVGD+VVGRIT+V  KRWKVD+   +DA L LSSVNLPGG QR RTYEDQLQMR F+ ENDLISAE+Q++  DGS++LHTRSL+YGKLENGQ + V   LV+R++QH V+L  +GVD+ILGTNGYIWITRS+     +   E  G G + +  E LM +R++HA T +   DR  + RV  +I  L      I+ ESI+ +Y +
Sbjct:   30 GSIVVVTPGEVISTETGAFLRGHGTYMSNNE-----LIASVAGVVEKVNQLITVRPLVSRYIGEVGDIVVGRITEVGKKRWKVDVNGQQDASLMLSSVNLPGGAQRRRTYEDQLQMRNFFVENDLISAEIQEVRYDGSLSLHTRSLRYGKLENGQFVQVQPSLVKRMKQHMVTLSSIGVDLILGTNGYIWITRSMSALGLDDQMEDTGPGNMETRVEVLMEKRQVHANTKLDVDDRVKVARVYRAILQLNEQFRMITPESILSLYAD 291          
BLAST of mRNA_P-wetherbeei_contig936.1.2 vs. uniprot
Match: H3G9T8_PHYRM (Ribosomal RNA-processing protein 4 n=6 Tax=Peronosporaceae TaxID=4777 RepID=H3G9T8_PHYRM)

HSP 1 Score: 283 bits (725), Expect = 5.830e-92
Identity = 150/268 (55.97%), Postives = 192/268 (71.64%), Query Frame = 0
Query:   13 ILVPGQLVSAEPG-FLRGHGTYTAESEEGTSQLVASVAGVVESINKLITVRPVKSRYIGEVGDLVVGRITDVANKRWKVDLRAHKDAVLALSSVNLPGGVQRIRTYEDQLQMRTFYAENDLISAEVQQIMNDGSIALHTRSLKYGKLENGQLLVVPQVLVRRLRQHNVSLP-VGVDVILGTNGYIWITRSIPQEWKEQGRESEGDGMVTSESEALMRQRRLHAETPIQRSDRELICRVRNSICALRHVLAFISAESIMHVYRESERLG 278
            ++ PGQ++S E G FLRGHGTY +    G ++LVASVAGVVE +N+LITVRP+ SRYIGEVGD+VVGR+TDVA+KRWKVD+   +DA L LSSV LPGG QR RTY DQLQMR F+ ENDLISAE+Q++  DGS++LHTRSL+YGKLENGQ + V   LV+R++QH V+LP +GVD ILGTNGYIW++RS+       G + + +  + +  E L  +R+LHA TP+   DR  I RV  ++  L      I+ ESIM  Y   E  G
Sbjct:   29 VVTPGQIISTETGAFLRGHGTYLS----GRNELVASVAGVVEKVNQLITVRPLVSRYIGEVGDIVVGRVTDVASKRWKVDVNGQQDAGLMLSSVTLPGGAQRRRTYADQLQMRAFFVENDLISAEIQEVRYDGSLSLHTRSLRYGKLENGQFVAVAAPLVKRMKQHMVTLPGIGVDAILGTNGYIWVSRSMAALG---GDDEDANSSMETRVEVLTAKRQLHASTPMSVEDRRRIARVSQALLRLNEQFRLITPESIMDTYELLESQG 289          
BLAST of mRNA_P-wetherbeei_contig936.1.2 vs. uniprot
Match: A0A067C1K3_SAPPC (Ribosomal RNA-processing protein 4 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1K3_SAPPC)

HSP 1 Score: 281 bits (720), Expect = 1.460e-91
Identity = 145/263 (55.13%), Postives = 191/263 (72.62%), Query Frame = 0
Query:   13 ILVPGQLVSAEPGFLRGHGTYTAESEEGTSQLVASVAGVVESINKLITVRPVKSRYIGEVGDLVVGRITDVANKRWKVDLRAHKDAVLALSSVNLPGGVQRIRTYEDQLQMRTFYAENDLISAEVQQIMNDGSIALHTRSLKYGKLENGQLLVVPQVLVRRLRQHNVSLPVGVDVILGTNGYIWITRSIPQEWKEQGRESEGDGMVTSESEALM--RQRRLHAETPIQRSDRELICRVRNSICALRHVLAFISAESIMHVYRE 273
            ++ PGQ++++EPGFLRGHGTY    E     L+ASVAGVVE +N+L++VRP+ SRYIGEVGD+VVGRI++V +KRWKVD+   +DAVL LSSVNLPGG QR RTYEDQLQMR+F+ E++LISAEVQ++  DG++ LHTRSL+YGKLENGQL+ V   LV+RL+QH + LP+G+DVILG NGYIWI R I         E + + + T+ES A +   ++  HA TP   +DR+ I  V N +  L      I+ ESIM +Y +
Sbjct:   10 VVTPGQVITSEPGFLRGHGTYVENGE-----LLASVAGVVEKVNQLVSVRPLVSRYIGEVGDIVVGRISEVGSKRWKVDINGQQDAVLMLSSVNLPGGAQRRRTYEDQLQMRSFFEESELISAEVQEVRYDGTMWLHTRSLRYGKLENGQLIAVQPALVKRLKQHMLQLPIGIDVILGCNGYIWIARRI---------EHDAESLTTNESRADVWTERKATHAATPTDAADRKKIAAVYNVLSTLNAQFKTITPESIMELYEQ 258          
BLAST of mRNA_P-wetherbeei_contig936.1.2 vs. uniprot
Match: A0A1V9YN11_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN11_9STRA)

HSP 1 Score: 282 bits (721), Expect = 1.990e-91
Identity = 145/265 (54.72%), Postives = 194/265 (73.21%), Query Frame = 0
Query:   13 ILVPGQLVSAEPGFLRGHGTYTAESEEGTSQLVASVAGVVESINKLITVRPVKSRYIGEVGDLVVGRITDVANKRWKVDLRAHKDAVLALSSVNLPGGVQRIRTYEDQLQMRTFYAENDLISAEVQQIMNDGSIALHTRSLKYGKLENGQLLVVPQVLVRRLRQHNVSLPVGVDVILGTNGYIWITRSIPQEWKEQGRESEGDGMVTSESEALM--RQRRLHAETPIQRSDRELICRVRNSICALRHVLAFISAESIMHVYRESE 275
            ++ PGQ++++EPGFLRGHGTY    E     L+ASVAGVVE +N+L++VRP+ SRYIGEVGD+VVGRI++V +KRWKVD+   +DAVL LSSVNLPGG QR RTYEDQLQMR+F+ E++LISAEVQ++  DG++ LHTRSL+YGKLENGQL+ V   LV+RL+QH + LP+G+DVILG NGYIW++RSI         E + + + T+ES A +   ++  HA T     DR+ I +V N+I  L      I+ ESIM +Y + +
Sbjct:   31 VVTPGQVITSEPGFLRGHGTYVENGE-----LLASVAGVVEKVNQLVSVRPLVSRYIGEVGDIVVGRISEVGSKRWKVDINGQQDAVLMLSSVNLPGGAQRRRTYEDQLQMRSFFEESELISAEVQEVRYDGTMWLHTRSLRYGKLENGQLITVQPSLVKRLKQHMLQLPIGIDVILGCNGYIWVSRSI---------EHDAESLTTNESRADVWTERKATHAATVTSAEDRKKIAKVTNAIAQLNTRFQTITPESIMALYNDED 281          
BLAST of mRNA_P-wetherbeei_contig936.1.2 vs. uniprot
Match: A0A2D4BZY9_PYTIN (Ribosomal RNA-processing protein 4 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZY9_PYTIN)

HSP 1 Score: 281 bits (720), Expect = 4.470e-91
Identity = 152/279 (54.48%), Postives = 195/279 (69.89%), Query Frame = 0
Query:    9 GRPAILVPGQLVSAEPG-FLRGHGTYTAESEEGTSQLVASVAGVVESINKLITVRPVKSRYIGEVGDLVVGRITDVANKRWKVDLRAHKDAVLALSSVNLPGGVQRIRTYEDQLQMRTFYAENDLISAEVQQIMNDGSIALHTRSLKYGKLENGQLLVVPQVLVRRLRQHNVSLP-VGVDVILGTNGYIWITRSIPQ---EWKEQGRESEGDGMVTSESEALMRQRRLHAETPIQRSDRELICRVRNSICALRHVLAFISAESIMHVYRESERLGLEPK 282
            G   ++ PG+++S E G FLRGHGTY + +E     LVASVAGVVE +N+LITVRP+ SRYIGEVGD+VVGR+T+V NKRWKVD+   +DA L LSSV LPGG QR RTYEDQLQMR+F+ ENDLISAE+Q++  DGS++LHTRSL+YGKLENGQ + V   LV+R++QH V+LP +GVDVILGTNGY+WI+RS+            E  G G + +  E L  +R+ HA T +   DRE I RV  ++  L      I+ +SI+ VY E  R   E +
Sbjct:   26 GSIVVVTPGEVISTETGAFLRGHGTYLSNNE-----LVASVAGVVEKVNQLITVRPLVSRYIGEVGDIVVGRVTEVGNKRWKVDVNGQQDAGLMLSSVTLPGGAQRRRTYEDQLQMRSFFVENDLISAEIQEVRYDGSLSLHTRSLRYGKLENGQFVAVRPSLVKRMKQHMVTLPTLGVDVILGTNGYLWISRSLSALDGVDDVASTEDTGPGSMETRVEVLTHKRQRHAATKMSHEDREKIARVYRAVLQLNEQFRVITPDSILAVYHELARQDAEKR 299          
BLAST of mRNA_P-wetherbeei_contig936.1.2 vs. uniprot
Match: A0A482SPQ7_9ARCH (S1 motif domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPQ7_9ARCH)

HSP 1 Score: 282 bits (721), Expect = 8.310e-91
Identity = 152/292 (52.05%), Postives = 202/292 (69.18%), Query Frame = 0
Query:   13 ILVPGQLVSAEPGFLRGHGTYTAESE-----EGTSQLV-ASVAGVVESINKLITVRPVKSRYIGEVGDLVVGRITDVANKRWKVDLRAHKDAVLALSSVNLPGGVQRIRTYEDQLQMRTFYAENDLISAEVQQIMNDGSIALHTRSLKYGKLENGQLLVVPQVLVRRLRQHNVSLPVGVDVILGTNGYIWITRSIPQEWK-EQGRESEGDGMVTSESEALMRQRRLHAETPIQRSDRELICRVRNSICALRHVLAFISAESIMHVYRESERLGLEPKDMLQDDSIWRLTEAL 297
            +LVPGQ +++E GFLRGHG+Y  E+E     EG+S ++ +SVAG +E +N+LI+V+P+  RY GE+GDLVVGRIT V +KRWKVD+   K+AVL LSSV LPGGVQR+RTYEDQLQMRT +   +L+SAE+QQI +DG + LHTRSLKYGKLENGQ   VP  L++RL QH V+LP  +D+ILG NGYIWITRSIP+ WK E G + E    +T  +E L   +  HA+TP    +R    R++N +  L      I+ E+IM VY+ S      P+D+L   +   + +AL
Sbjct:   41 LLVPGQPITSESGFLRGHGSYLVENEQVGGEEGSSAILKSSVAGQIERVNRLISVKPLNIRYRGEIGDLVVGRITAVDSKRWKVDIAGQKEAVLQLSSVTLPGGVQRMRTYEDQLQMRTLFDVGELVSAEIQQINSDGMVFLHTRSLKYGKLENGQFTSVPSNLMKRLPQHYVTLPCNMDIILGKNGYIWITRSIPESWKDESGHQDE----LTPLAETLQNIKMRHAQTPFNAEERLKAARLQNCVGVLSSSSVAITPENIMLVYQYSVDNNWHPRDLLLPSTSRMIIDAL 328          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig936.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CMW4_9STRA1.170e-12465.53Ribosomal RNA-processing protein 4 n=1 Tax=Tribone... [more]
A0A6H5KMR3_9PHAE4.010e-11663.29Ribosomal RNA-processing protein 4 n=1 Tax=Ectocar... [more]
D8LIC3_ECTSI4.390e-9766.96Ribosomal RNA-processing protein 4 n=1 Tax=Ectocar... [more]
A0A1V9YVZ5_9STRA2.070e-9356.23Ribosomal RNA-processing protein 4 n=1 Tax=Thraust... [more]
A0A8K1FMX9_PYTOL5.170e-9255.81Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3G9T8_PHYRM5.830e-9255.97Ribosomal RNA-processing protein 4 n=6 Tax=Peronos... [more]
A0A067C1K3_SAPPC1.460e-9155.13Ribosomal RNA-processing protein 4 n=2 Tax=Saprole... [more]
A0A1V9YN11_9STRA1.990e-9154.72Ribosomal RNA-processing protein 4 n=1 Tax=Achlya ... [more]
A0A2D4BZY9_PYTIN4.470e-9154.48Ribosomal RNA-processing protein 4 n=1 Tax=Pythium... [more]
A0A482SPQ7_9ARCH8.310e-9152.05S1 motif domain-containing protein n=1 Tax=archaeo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 71..151
e-value: 0.0053
score: 26.0
IPR025721Exosome complex component, N-terminal domainPFAMPF14382ECR1_Ncoord: 13..53
e-value: 1.4E-10
score: 40.8
IPR004088K Homology domain, type 1PFAMPF15985KH_6coord: 161..200
e-value: 5.8E-8
score: 33.1
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 69..159
e-value: 3.7E-20
score: 73.7
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 66..158
NoneNo IPR availableGENE3D2.40.50.100coord: 12..68
e-value: 6.7E-22
score: 78.8
NoneNo IPR availablePANTHERPTHR21321:SF4EXOSOME COMPLEX COMPONENT RRP4coord: 10..289
NoneNo IPR availableCDDcd05789S1_Rrp4coord: 67..158
e-value: 4.63188E-37
score: 125.355
NoneNo IPR availableSUPERFAMILY110324Ribosomal L27 protein-likecoord: 13..64
IPR026699Exosome complex RNA-binding protein 1/RRP40/RRP4PANTHERPTHR21321PNAS-3 RELATEDcoord: 10..289
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 160..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig936contigP-wetherbeei_contig936:3014..5810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig936.1.2mRNA_P-wetherbeei_contig936.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig936 2969..5871 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig936.1.2 ID=prot_P-wetherbeei_contig936.1.2|Name=mRNA_P-wetherbeei_contig936.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=301bp
MSRGADRTGRPAILVPGQLVSAEPGFLRGHGTYTAESEEGTSQLVASVAG
VVESINKLITVRPVKSRYIGEVGDLVVGRITDVANKRWKVDLRAHKDAVL
ALSSVNLPGGVQRIRTYEDQLQMRTFYAENDLISAEVQQIMNDGSIALHT
RSLKYGKLENGQLLVVPQVLVRRLRQHNVSLPVGVDVILGTNGYIWITRS
IPQEWKEQGRESEGDGMVTSESEALMRQRRLHAETPIQRSDRELICRVRN
SICALRHVLAFISAESIMHVYRESERLGLEPKDMLQDDSIWRLTEALGRT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR025721Exosome_cplx_N_dom
IPR004088KH_dom_type_1
IPR012340NA-bd_OB-fold
IPR026699Exosome_RNA_bind1/RRP40/RRP4
IPR036612KH_dom_type_1_sf