prot_P-wetherbeei_contig934.5.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig934.5.2
Unique Nameprot_P-wetherbeei_contig934.5.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length315
Homology
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BLAST of mRNA_P-wetherbeei_contig934.5.2 vs. uniprot
Match: A0A835Z765_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z765_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 6.860e-14
Identity = 50/119 (42.02%), Postives = 67/119 (56.30%), Query Frame = 0 
Query:  132 AAVRPSPAAFVQSAQRSASGVAENMLEVGLSTAGGFLNGGVLGYFFG----------FLGGVRNNPNAGFAFLRAMHSKALGSAASWGGVCASFSGIGTATRVLRGKEDRWNHIIASCG 240
            AAV P       ++ RS SG  E  +EVGL+T G  ++GGVLGY  G          F GG+ N        ++AMH+K   + +SWG + A FSG  +A RV+RG+ED WN I+ SCG
Sbjct:   78 AAVAPLTTIAKTASGRSESGFFECCMEVGLTTVGSLVSGGVLGYIIGWGIGIAQKGAFEGGLGNA-------IKAMHAKGRQTGSSWGLITACFSGFTSAARVMRGREDHWNSILGSCG 189
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BLAST of mRNA_P-wetherbeei_contig934.5.2 vs. uniprot
Match: A0A7S3Q6B1_9STRA (Hypothetical protein n=4 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q6B1_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 9.380e-5
Identity = 39/108 (36.11%), Postives = 54/108 (50.00%), Query Frame = 0 
Query:  155 NMLEVGLSTAGGFLNGGVLGYFFGFLGGV----RN---------------NPNAGFAFLR----AMHSKALGSAASWGGVCASFSGIGTATRVLRGK-EDRWNHIIAS 238
            N +EVG++TAG +++GG+ GY  G + GV    +N               N   G + ++    + +S A     SWG V ASFSG    TR  RG  EDRWN I+ S
Sbjct:  215 NSVEVGVTTAGSYMSGGLFGYLIGGVSGVPALFKNSAETATSTATQNASANARGGLSEIQRRVGSWNSHAFARGKSWGEVSASFSGFHALTRAARGGVEDRWNGIVGS 322
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig934.5.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z765_9STRA6.860e-1442.02Mitochondrial import inner membrane translocase su... [more]
A0A7S3Q6B1_9STRA9.380e-536.11Hypothetical protein n=4 Tax=Chaetoceros debilis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 163..239
e-value: 9.9E-10
score: 38.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig934contigP-wetherbeei_contig934:4653..6770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig934.5.2mRNA_P-wetherbeei_contig934.5.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig934 4575..7825 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig934.5.2 ID=prot_P-wetherbeei_contig934.5.2|Name=mRNA_P-wetherbeei_contig934.5.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=315bp
MVMASRVNWRTKRDAAAAAAASAAGSSGGASVLALVLSPRARKAKEATAA
SAEARRSDENASATSEDAGTASSAAAAAEDAVVRKEAASLPPSSPVTNAG
SARSVTVAATAPPPRSAAAHVGGGGGSGGALAAVRPSPAAFVQSAQRSAS
GVAENMLEVGLSTAGGFLNGGVLGYFFGFLGGVRNNPNAGFAFLRAMHSK
ALGSAASWGGVCASFSGIGTATRVLRGKEDRWNHIIASCGEPFARRPPPF
AGCLFFFFLPFFGPEHAGAGTCTEVGGLLFRFRAHHLSQHLTVSSLSAFR
PRQLVRAPSVSAPF*
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