prot_P-wetherbeei_contig9317.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9317.1.2
Unique Nameprot_P-wetherbeei_contig9317.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length700
Homology
BLAST of mRNA_P-wetherbeei_contig9317.1.2 vs. uniprot
Match: A0A835YNL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL2_9STRA)

HSP 1 Score: 233 bits (595), Expect = 3.520e-61
Identity = 168/429 (39.16%), Postives = 207/429 (48.25%), Query Frame = 0
Query:    3 ESGGRALLPQEAADGLLVLVTLMTMLVGLWLGDAPAFAAAVVRQVLAAADARAVDVLLRSVRTRSYAMEGVHAGVALLSQWDDMLATLRWSALLGWPESRPPSLLGTADKLFHVRWAALRGLGIVRARTATTLTLLHDAFMHAELEPARWLMLSHAALLVTETVDRETPVFLGLMEAAATLLRLDSSGNGXXXXXXXXXXGLAAGITATELGLSGAFRLGGXXXXXXXXXXXXXXXRAAAVEANEWRAGRFMELFLSPELRAARPLRWNEHQYDRLAEHSAPALAQLAQHLAEAFDLGPPPNRVDVHCWTRYGPR---------------------------VRAFLAEATCASRSAVHLGDRGLGDVGYGSFVAVAAKLRARAAAFPRVSPLEASYPLSVVTVDLSGNRLGPGAGLRLAEMLHANTTV 404
            ++GG   +P   A   LV VTL   +V L L D  +   A V  + A  D+   D+L   V   +  +E  H GV LLSQWDD+L   RWS  + WP   P +LL   +K+  VRWAALRGL I   RT+TTL+LLHDAF+ AE+E ARWLM  H  LL +ETV RE PV+LGL+E A+TLLRL                      TA      GA                         EA  W+AG+F+ LFLSP LRAA P+ W+ HQY  +   +    A+LAQHLAEAFDL PP        W  Y P                            V+ FLA A CA    V L   GLGD G  +  A+   L AR   F   S    +YP+ V  +DL  NRLG  A + LA  LHAN T+
Sbjct:  794 QAGG---MPSWLAAAALVAVTLAAAVVLLRLADLGSLLMAFVHGLRAFVDSGVEDLLFSQVHRHALGLETGHEGVLLLSQWDDLLQDQRWSGFMAWPSPVPGTLLSLQNKVMTVRWAALRGLSIDAMRTSTTLSLLHDAFIRAEVEAARWLMHHHPQLLSSETVTREGPVYLGLLEMASTLLRLADEQ-----------------ATAPPPASDGA----------------------VMTEAR-WKAGQFLRLFLSPPLRAA-PIVWDAHQYAAMGARAGAEAAELAQHLAEAFDLNPPRGYSRKSRWAAYAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEFLAAALCACHPNVSLVSAGLGDGGLPALRALCHVLAARDIPFIPPSLDRLAYPVVVRMLDLRANRLGTAASVPLAAALHANRTL 1178          
BLAST of mRNA_P-wetherbeei_contig9317.1.2 vs. uniprot
Match: D7G0L6_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0L6_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 1.670e-50
Identity = 236/607 (38.88%), Postives = 296/607 (48.76%), Query Frame = 0
Query:    1 IGESGGRALLPQEAADGLLVLVTLMTMLVGLWLGDAPAFAAAVVRQVLAAADARAVDVLLRSVRTRSYAMEGVHAGVALLSQWDDMLATLRWSALLGWPESRPPSLLGTADKLFHVRWAALRGLGIVRARTATTLTLLHDAFMHAELEPARWLMLSHAALLVTETVDRETPVFLGLMEAAATLLRLDSSGNGXXXXXXXXXXGLAAGITATELG----LSGAFRLGGXXXXXXXXXXXXXXXRAAAVEANE---------------WRAGRFMELFLSPELRAARPLRWNEHQYDRLAEHSAPALAQLAQHLAEAFDLGPPPNRVDVHCWTRYGPRVRAFLAEATCASRSAVHLGDRGLGDVGYGSFVAVAAKLRARAAAFPRVSPLEASYPLSVVTVDLSGNRLGPGAGLRLAEMLHANTTVRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQRSAAATAAGAGGAAGVVPSAGPXXXXXXXXXXXXXXXXXNRCRLGAETGAAFALAVRKHPKLTTLGLAENLLLPDGGSALVMALTA-RGVTLTALDASDNQLGRRVGRLLGPALR 587
            IG +G    +P+   D  L+ V L  +   L LG+    A   V + LAAAD R  D+L R +                                                  F VRWA+LRGL I RART+T L+LLHD+ ++AE+EP RWL+  +  LL  ET+ +E+P+ LG++E A  LLR+++              GL    +A++ G    L G   LGG   XXXXXXXXXXXX      A E               W+ GR  E+FLS EL+ A  LRWN HQYD L EH  P L++LAQ+LAEAF++ PP     VH W +     R  L EATCASRS V L   GLGD GY S +++   L  +A  F   SP      ++VV VDLSGNR+   +G R+A+ML  N T+  L                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E++    T     G    VPSAGP                      GA+TG AFA  V +H                    L + L A +  TLT LD SDN +G++   L    L+
Sbjct:  766 IGAAGAGGAVPKYVVDTFLLAVGLAGIAAALVLGEVVRGAMVFVGKTLAAADERVNDLLFRQI--------------------------------------------------FVVRWASLRGLDISRARTSTGLSLLHDSVINAEVEPTRWLVHLYPVLLHAETLHKESPLLLGILETARVLLRMEA------LTARLNDWGLDLPDSASQAGQGSLLGGLGLLGGNVGXXXXXXXXXXXXXXXGGVATEEIQKEADEEEVAALAWKVGRLAEMFLSNELQNAE-LRWNAHQYDLLTEHGEPDLSELAQNLAEAFNVKPPKGYAHVHRWRKRARFTRDCLGEATCASRSDVDLAGCGLGDRGYKSLLSICRALSVQATTFTWPSPYTTQVRINVVRVDLSGNRMRRKSGYRIADMLLLNKTITDLNLSANALDSGAAKEIFFAARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGERKFWLPT-----GEIMHVPSAGPSLGDALRYNRTLTVLKVKGNLFGADTGHAFASGVARHXXXXXXXXXXXXXXXXXXXXLALRLNAAKRSTLTRLDVSDNHVGKKAATLFSATLK 1310          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9317.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YNL2_9STRA3.520e-6139.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G0L6_ECTSI1.670e-5038.88Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 401..428
e-value: 1.5
score: 16.0
coord: 429..456
e-value: 0.5
score: 19.3
coord: 617..644
e-value: 0.73
score: 18.1
coord: 504..531
e-value: 1.0
score: 17.1
coord: 457..492
e-value: 99.0
score: 3.1
coord: 532..559
e-value: 2.6
score: 14.2
coord: 645..681
e-value: 7.3
score: 11.1
coord: 589..616
e-value: 0.14
score: 21.3
coord: 373..400
e-value: 17.0
score: 8.5
coord: 561..588
e-value: 71.0
score: 4.1
NoneNo IPR availablePANTHERPTHR24114LEUCINE RICH REPEAT FAMILY PROTEINcoord: 487..697
coord: 322..471
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 374..697
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 429..451
e-value: 0.43
score: 10.8
coord: 401..423
e-value: 0.17
score: 12.0
coord: 457..471
e-value: 0.21
score: 11.8
coord: 503..524
e-value: 1.3
score: 9.3
coord: 645..661
e-value: 1.5
score: 9.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 605..698
e-value: 2.2E-16
score: 61.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 327..483
e-value: 1.0E-24
score: 88.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 491..604
e-value: 2.1E-19
score: 71.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9317contigP-wetherbeei_contig9317:3..2213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9317.1.2mRNA_P-wetherbeei_contig9317.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9317 3..2213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9317.1.2 ID=prot_P-wetherbeei_contig9317.1.2|Name=mRNA_P-wetherbeei_contig9317.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=700bp
IGESGGRALLPQEAADGLLVLVTLMTMLVGLWLGDAPAFAAAVVRQVLAA
ADARAVDVLLRSVRTRSYAMEGVHAGVALLSQWDDMLATLRWSALLGWPE
SRPPSLLGTADKLFHVRWAALRGLGIVRARTATTLTLLHDAFMHAELEPA
RWLMLSHAALLVTETVDRETPVFLGLMEAAATLLRLDSSGNGDGGDGDGA
GGGLAAGITATELGLSGAFRLGGGGGGEAWGAAAAAAQRAAAVEANEWRA
GRFMELFLSPELRAARPLRWNEHQYDRLAEHSAPALAQLAQHLAEAFDLG
PPPNRVDVHCWTRYGPRVRAFLAEATCASRSAVHLGDRGLGDVGYGSFVA
VAAKLRARAAAFPRVSPLEASYPLSVVTVDLSGNRLGPGAGLRLAEMLHA
NTTVRLLDLSGNGLDAAAASAVARAVRGNAVLLSLNLAGNRIGPKAASDL
ARMIRANSTLTRLDLSGNPMGEQRSAAATAAGAGGAAGVVPSAGPALGRA
LRHNTALTRLDLNRCRLGAETGAAFALAVRKHPKLTTLGLAENLLLPDGG
SALVMALTARGVTLTALDASDNQLGRRVGRLLGPALRKNSSLRALEIGGN
ALGTRAGVSVARALRQNRTLASLGLSSSGLGPDACRSLAVALEENCSVTA
LDLSENALGASSAAGGDGRGVGLRLARALRRNVTLTGLELSANGFPPAEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf