prot_P-wetherbeei_contig931.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig931.4.1
Unique Nameprot_P-wetherbeei_contig931.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length99
Homology
BLAST of mRNA_P-wetherbeei_contig931.4.1 vs. uniprot
Match: D8LDC0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC0_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 2.450e-17
Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 0
Query:    6 EEAAAGAPVPLVQRCNLCWNG--VCL---SGSGQCFRTTCRHIFCESCAYNHFGEHQTCPSCGRELRETDVCEVSFGLPPSQDFTSSLYQELYKE 95
            +E A G  +P   RCN+CWN   V L    G+G C+ T C H+FCESCA+ HFG+ Q CP+CG  L E+++ +++ GL PS      +++E  KE
Sbjct:    3 QEGAPGQTLP--HRCNMCWNPHPVALPRQEGTGSCYVTRCGHLFCESCAFRHFGQSQACPTCGHGLDESEIQDLTLGLEPSS-LRRIVFEEALKE 94          
BLAST of mRNA_P-wetherbeei_contig931.4.1 vs. uniprot
Match: A0A6H5JFE1_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE1_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.570e-17
Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 0
Query:    6 EEAAAGAPVPLVQRCNLCWNGVCLSGSGQCFRTTCRHIFCESCAYNHFGEHQTCPSCGRELRETDVCEVSFGLPPS 81
            +E   G  +P   RCN+CWN     G+G C+ T C H+FCESCA+ HFG+ Q CP+CG  L E+++ +++ GL PS
Sbjct:    3 QEGTPGHSLP--HRCNMCWN----EGNGSCYVTRCGHLFCESCAFRHFGQSQACPTCGHGLDESEIQDLTLGLEPS 72          
BLAST of mRNA_P-wetherbeei_contig931.4.1 vs. uniprot
Match: G4YY62_PHYSP (RING-type domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YY62_PHYSP)

HSP 1 Score: 58.9 bits (141), Expect = 3.650e-9
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0
Query:   19 RCNLCWNGVC--LSGSGQCFRTTCRHIFCESCAYNHFGEHQT-CPSCGRELRE 68
            RCN CW  +      +  C+RTTC H+FCE CAY HFG+ +  CP+C  +L +
Sbjct:   47 RCNSCWEPILPDAQSAETCYRTTCGHLFCEKCAYKHFGQGRLQCPACSADLSQ 99          
BLAST of mRNA_P-wetherbeei_contig931.4.1 vs. uniprot
Match: F0WGR8_9STRA (AlNc14C94G5795 protein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGR8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.680e-9
Identity = 25/60 (41.67%), Postives = 34/60 (56.67%), Query Frame = 0
Query:   19 RCNLCWNGVCLS--GSGQCFRTTCRHIFCESCAYNHFGEHQ-TCPSCGRELRETDVCEVS 75
            RCN CW  +  S   +  C+RT C H+FCE CAY HFG  Q  CP+C  ++    + E +
Sbjct:   47 RCNACWERILSSTHSAQTCYRTYCSHLFCEKCAYKHFGGGQLVCPACHSDMSRNGINETT 106          
BLAST of mRNA_P-wetherbeei_contig931.4.1 vs. uniprot
Match: A0A329S1I8_9STRA (RING-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S1I8_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.060e-8
Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 0
Query:   19 RCNLCWNGVC--LSGSGQCFRTTCRHIFCESCAYNHFGEHQT-CPSCGRELRE 68
            RCN CW  +      +  C+RT+C H+FCE CAY HFG+ +  CP+C  +L +
Sbjct:   47 RCNACWEPILPDAQSAETCYRTSCGHLFCEKCAYKHFGQGRLQCPACNIDLSQ 99          
BLAST of mRNA_P-wetherbeei_contig931.4.1 vs. uniprot
Match: H3GLD4_PHYRM (RING-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLD4_PHYRM)

HSP 1 Score: 57.0 bits (136), Expect = 2.060e-8
Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 0
Query:   19 RCNLCWNGVC--LSGSGQCFRTTCRHIFCESCAYNHFGEHQT-CPSCGRELRE 68
            RCN CW  +      +  C+RT+C H+FCE CAY HFG+ +  CP+C  +L +
Sbjct:   47 RCNACWGPILPDAQSAETCYRTSCGHLFCEKCAYKHFGQGRLQCPACNVDLSQ 99          
BLAST of mRNA_P-wetherbeei_contig931.4.1 vs. uniprot
Match: W2QZI3_PHYPN (RING-type domain-containing protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QZI3_PHYPN)

HSP 1 Score: 57.4 bits (137), Expect = 2.070e-8
Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 0
Query:   19 RCNLCWNGVC--LSGSGQCFRTTCRHIFCESCAYNHFGEHQT-CPSCGRELRE 68
            RCN CW  +      +  C+RT+C H+FCE CAY HFG+ +  CP+C  +L +
Sbjct:   44 RCNACWEPILPDAQSAETCYRTSCGHLFCEKCAYKHFGQGRLQCPTCSVDLNQ 96          
BLAST of mRNA_P-wetherbeei_contig931.4.1 vs. uniprot
Match: A0A833WTW3_PHYIN (Zinc-RING finger domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WTW3_PHYIN)

HSP 1 Score: 58.9 bits (141), Expect = 4.980e-8
Identity = 27/79 (34.18%), Postives = 43/79 (54.43%), Query Frame = 0
Query:   19 RCNLCWNGVC--LSGSGQCFRTTCRHIFCESCAYNHFGEHQT-CPSCGRELRET--DVCEVSFGLPPSQDFTSSLYQEL 92
            RCN CW  +   +  +  C+RT+C H+FCE CAY HFG+ +  CP C  +L E    + E +         T ++++E+
Sbjct:   47 RCNACWEPILPDVQSAETCYRTSCGHLFCEKCAYKHFGQGRLQCPVCSIDLNEARGGISETTIHGVADSKRTEAIWEEM 125          
BLAST of mRNA_P-wetherbeei_contig931.4.1 vs. uniprot
Match: A0A225V855_9STRA (Zinc ion binding protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V855_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 9.020e-8
Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0
Query:   19 RCNLCWNGVC--LSGSGQCFRTTCRHIFCESCAYNHFGEHQT-CPSC 62
            RCN CW  +      +  C+RT+C H+FCE CAY HFG+ +  CP+C
Sbjct:   47 RCNACWEPILPDAQSAETCYRTSCGHLFCEKCAYKHFGQGRLQCPAC 93          
BLAST of mRNA_P-wetherbeei_contig931.4.1 vs. uniprot
Match: A0A2P4XRP0_9STRA (Zinc ion binding protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRP0_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 9.660e-8
Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0
Query:   19 RCNLCWNGVC--LSGSGQCFRTTCRHIFCESCAYNHFGEHQT-CPSC 62
            RCN CW  +      +  C+RT+C H+FCE CAY HFG+ +  CP+C
Sbjct:   47 RCNACWEPILPDAQSAETCYRTSCGHLFCEKCAYKHFGQGRLQCPAC 93          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig931.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LDC0_ECTSI2.450e-1743.16RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JFE1_9PHAE3.570e-1746.05RING-type domain-containing protein n=1 Tax=Ectoca... [more]
G4YY62_PHYSP3.650e-945.28RING-type domain-containing protein n=1 Tax=Phytop... [more]
F0WGR8_9STRA5.680e-941.67AlNc14C94G5795 protein n=1 Tax=Albugo laibachii Nc... [more]
A0A329S1I8_9STRA2.060e-843.40RING-type domain-containing protein n=2 Tax=Phytop... [more]
H3GLD4_PHYRM2.060e-843.40RING-type domain-containing protein n=1 Tax=Phytop... [more]
W2QZI3_PHYPN2.070e-843.40RING-type domain-containing protein n=6 Tax=Phytop... [more]
A0A833WTW3_PHYIN4.980e-834.18Zinc-RING finger domain n=1 Tax=Phytophthora infes... [more]
A0A225V855_9STRA9.020e-846.81Zinc ion binding protein n=1 Tax=Phytophthora mega... [more]
A0A2P4XRP0_9STRA9.660e-846.81Zinc ion binding protein n=1 Tax=Phytophthora palm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 5..96
e-value: 7.6E-9
score: 37.3
IPR001841Zinc finger, RING-typePFAMPF14634zf-RING_5coord: 19..63
e-value: 1.6E-7
score: 31.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 20..62
score: 9.612443
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 40..49
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 19..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig931contigP-wetherbeei_contig931:7581..8016 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig931.4.1mRNA_P-wetherbeei_contig931.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig931 7498..8016 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig931.4.1 ID=prot_P-wetherbeei_contig931.4.1|Name=mRNA_P-wetherbeei_contig931.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp
MLSIEEEAAAGAPVPLVQRCNLCWNGVCLSGSGQCFRTTCRHIFCESCAY
NHFGEHQTCPSCGRELRETDVCEVSFGLPPSQDFTSSLYQELYKEAGLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
IPR017907Znf_RING_CS