prot_P-wetherbeei_contig9122.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9122.2.1
Unique Nameprot_P-wetherbeei_contig9122.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length108
Homology
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BLAST of mRNA_P-wetherbeei_contig9122.2.1 vs. uniprot
Match: A0A7V8ZKU4_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7V8ZKU4_9ACTN)

HSP 1 Score: 50.1 bits (118), Expect = 2.040e-5
Identity = 35/85 (41.18%), Postives = 47/85 (55.29%), Query Frame = 0 
Query:    7 LDRELVEYPESVRGLKL-KARLLTS--QKDDSAALAAWDHVL----EVAPRDGDAYLERGRIRYARQDWAGALSDLRRATEISPE 84
            L++ + E P+    L L  A LL S  Q  D +A    D  +    E+ PR+   Y ERG +R AR D+AGALSD RRA  ++PE
Sbjct:   43 LEQAIRERPQEAEPLVLLAAELLQSFRQTADPSAYTRADEAIARAIELEPRNAAVYTERGILRLARHDYAGALSDGRRARRLAPE 127
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9122.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7V8ZKU4_9ACTN2.040e-541.18Uncharacterized protein (Fragment) n=1 Tax=Solirub... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 52..85
e-value: 0.081
score: 22.1
coord: 18..51
e-value: 13.0
score: 13.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 52..85
score: 8.7914
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..108
e-value: 3.4E-16
score: 61.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 7..106
NoneNo IPR availablePFAMPF13371TPR_9coord: 23..88
e-value: 6.7E-9
score: 35.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9122contigP-wetherbeei_contig9122:2241..2564 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9122.2.1mRNA_P-wetherbeei_contig9122.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9122 2241..2564 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9122.2.1 ID=prot_P-wetherbeei_contig9122.2.1|Name=mRNA_P-wetherbeei_contig9122.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=108bp
RESAAELDRELVEYPESVRGLKLKARLLTSQKDDSAALAAWDHVLEVAPR
DGDAYLERGRIRYARQDWAGALSDLRRATEISPESDLANYNFAIALLRSA
QDDRARSQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf