prot_P-wetherbeei_contig912.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig912.2.1
Unique Nameprot_P-wetherbeei_contig912.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length315
Homology
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BLAST of mRNA_P-wetherbeei_contig912.2.1 vs. uniprot
Match: A0A6A3QK27_9STRA (DDE Tnp4 domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3QK27_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.670e-5
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 0 
Query:   30 ITPETQLAIAIRYFAAGSVTDIRQKHGVSPAATYECIHRVTKAINRCEEL--AFPGIPTSEEDCAAAAAGFVMKTNSAVFTKCVGAV 114
            I+ +  L + +RYFA GS+ DIR+  GVS A+ Y  +  V  AIN   EL   FP  PT+ E   A+AA F   +   VF+ CVG V
Sbjct:   81 ISVDNALQLTLRYFAGGSMHDIRRVAGVSKASFYRILWLVVDAINAVSELRLVFPRSPTARE---ASAAAFKTLSAEGVFSGCVGCV 164
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig912.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6A3QK27_9STRA1.670e-542.53DDE Tnp4 domain-containing protein n=2 Tax=Phytoph... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig912contigP-wetherbeei_contig912:96..1040 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig912.2.1mRNA_P-wetherbeei_contig912.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig912 18..1429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig912.2.1 ID=prot_P-wetherbeei_contig912.2.1|Name=mRNA_P-wetherbeei_contig912.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=315bp
MSNETFNKVVEVIRPHLSYTGVGRSDAPPITPETQLAIAIRYFAAGSVTD
IRQKHGVSPAATYECIHRVTKAINRCEELAFPGIPTSEEDCAAAAAGFVM
KTNSAVFTKCVGAVVSSHSNFTTVLKCFPVDVCRVSKRLGFLSCRLARLR
QDCEYLWQSGLRGPGVRLSALEFCNQTTFRFSFPLIRFAGLPLRRTVSYS
KFKCHLLRTARGRQNFGTLERGRTASTAKLSLVPILDFTAFRFAARGRRM
TPPRSPIPASAARSIECRSIITSSRTPPTRFQRELLRPMSARPWQPAGRL
GRLQLGAVEYAHPR*
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