prot_P-wetherbeei_contig905.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig905.1.1
Unique Nameprot_P-wetherbeei_contig905.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length211
Homology
BLAST of mRNA_P-wetherbeei_contig905.1.1 vs. uniprot
Match: D7FSI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSI4_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 6.350e-22
Identity = 48/128 (37.50%), Postives = 87/128 (67.97%), Query Frame = 0
Query:   84 PDAYCSKVVRNGDYFGYLCTTLLRPPTARPAALAVRAFNLETSLLAETEPGKILALQVRMEWWSNALNELYANPSSRQLPAQPVIQALSGALS-RGSNLTKRWFERMLEARLAELQGARPQSIKDLET 210
            P  +CS VV+ GDY GYL + LL+    RPA+LA+RAFN+ET+ + ++  G ++  ++RM+WW + + +++      + P  PV  AL+  ++ +   LT+RWF+R+L+AR+A+L   +P++++++ET
Sbjct:   14 PFGHCSDVVKRGDYDGYLYS-LLQGAQLRPASLAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDTMADVFVG----EPPPLPVALALAEVVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMET 136          
BLAST of mRNA_P-wetherbeei_contig905.1.1 vs. uniprot
Match: A0A4D9CW87_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CW87_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.110e-19
Identity = 50/123 (40.65%), Postives = 77/123 (62.60%), Query Frame = 0
Query:   87 YCSKVVRNGDYFGYLCTTLLRPPTARPAALAVRAFNLETSLLAETEPGKILALQVRMEWWSNALNELYANPSSRQLPAQPVIQALSGALSRGSNLTKRWFERMLEARLAELQGARPQSIKDLE 209
            YC ++V+  D+  YLC  LL P ++R A  A+RAFN+ET+L+ +   G  L  Q+RM+WW   ++ +Y   S    PA PV +AL  A+ +  NLT+RW +R+LEAR  +L   +P  +++LE
Sbjct:   28 YCVELVKQHDFDAYLCG-LLVPRSSRRAYFALRAFNVETALIKDVARGNTLPGQMRMQWWREVISAIYQGKS----PAHPVARALCEAV-QAHNLTRRWLDRLLEAREGDLGNIQPTRMEELE 144          
BLAST of mRNA_P-wetherbeei_contig905.1.1 vs. uniprot
Match: A0A061S9Y5_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S9Y5_9CHLO)

HSP 1 Score: 85.5 bits (210), Expect = 1.040e-16
Identity = 50/141 (35.46%), Postives = 83/141 (58.87%), Query Frame = 0
Query:   69 NGNRRLSEATQRLMSPDAYCSKVVRNGDYFGYLCTTLLRPPTARPAALAVRAFNLETSLLAETEPGKILALQVRMEWWSNALNELYANPSSRQLPAQPVIQALSGALSRGSNLTKRWFERMLEARLAELQGARPQSIKDLE 209
            +G R+ S A     S   YC   V+  D   YL   LL P  A+ AA ++RAFN+ET+L+A+    ++   Q+R+ WW ++++ ++  P    +P+ PV+QALS   SR   +++ W  R+L+ R A+L+G+ P +I D+E
Sbjct:   18 SGLRKFSSAPSSFSSAFKYCRNQVQTYDRENYLWCLLL-PREAQAAAFSLRAFNVETALVADASK-ELPIQQMRLLWWRDSISSIFRGPMEA-IPSHPVLQALSFVASRRP-ISQYWLARVLQTREADLEGSSPSNIADVE 154          
BLAST of mRNA_P-wetherbeei_contig905.1.1 vs. uniprot
Match: A0A8C4T0L5_ERPCA (NADH:ubiquinone oxidoreductase complex assembly factor 6 n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4T0L5_ERPCA)

HSP 1 Score: 85.5 bits (210), Expect = 3.080e-16
Identity = 49/130 (37.69%), Postives = 78/130 (60.00%), Query Frame = 0
Query:   81 LMSPDAYCSKVVRNGDYFGYLCTTLLRPPTARPAALAVRAFNLETSLLAETEPGKILALQVRMEWWSNALNELYANPSSRQLPAQPVIQALSGALSRGSNLTKRWFERMLEARLAELQGARPQSIKDLET 210
            L +   +C ++VR  DY G+LC+ LL PP +R +++AVRAFN+E + + +    K + L VRM++W NAL E++ +      P QPV   L  A+ +   LTK WF R++  R  +L     ++I++LET
Sbjct:   43 LQNDQEHCLQLVRTRDYEGFLCSLLL-PPESRRSSIAVRAFNVELAQIKDLVSQKTMGL-VRMQFWKNALEEIFKDDP----PHQPVAMELWRAIKK-HRLTKGWFSRIINTREEDLNDRAYRNIQELET 165          
BLAST of mRNA_P-wetherbeei_contig905.1.1 vs. uniprot
Match: A0A2P2JAN0_RHIMU (Uncharacterized protein n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JAN0_RHIMU)

HSP 1 Score: 84.7 bits (208), Expect = 6.330e-16
Identity = 58/153 (37.91%), Postives = 85/153 (55.56%), Query Frame = 0
Query:   63 TLVVRRNGNRRLSE-ATQRLMSPDAYCSKVVRNGDYFGYLCTTLLRPPTARPAALAVRAFNLETSLLAETEPGKILALQVRMEWWSNALNELYANPSSRQLPAQPVIQALSGALSRGSNLTKRWFERMLEARLAELQGAR-----PQSIKDLE 209
            T++ RRN  R L + A+  L +  +YC + VRN DY  YLC   L P   R AA A+RA N+ET+   +      + L +R+ WW  A+N++YAN S       P  QALS  +S  + ++KRW  R +EAR+ +  G R     P+ I++LE
Sbjct:   17 TIIRRRNSRRDLMQGASSSLRTAFSYCVQQVRNYDYHHYLCLLEL-PLDMRKAAFALRALNVETAKAMDVASDPRIGL-MRLLWWQEAINKIYANKSIEH----PTAQALSAVISE-NQISKRWLTRSIEARIND--GRREETDIPECIEELE 160          
BLAST of mRNA_P-wetherbeei_contig905.1.1 vs. uniprot
Match: UPI00063F31F3 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 n=2 Tax=Monomorium pharaonis TaxID=307658 RepID=UPI00063F31F3)

HSP 1 Score: 84.3 bits (207), Expect = 6.530e-16
Identity = 52/136 (38.24%), Postives = 81/136 (59.56%), Query Frame = 0
Query:   75 SEATQRLMSPDAYCSKVVRNGDYFGYLCTTLLRPPTARPAALAVRAFNLETSLLAE-TEPGKILALQVRMEWWSNALNELYANPSSRQLPAQPVIQALSGALSRGSNLTKRWFERMLEARLAELQGARPQSIKDLE 209
            + A ++  +P  YC ++VR  DY  YLCT LL P + + AA A+RAFN+E + + +     +I A+  R+++W++ALNE Y N      P  PV   L   L R   L+KR+F+R++EARL +L G+    ++ LE
Sbjct:   20 TNAARQKQTPTEYCLQLVRKSDYENYLCTLLL-PHSIKSAAFAIRAFNVEVAQVEDQVSDSRIGAM--RLQFWTDALNETYNNNP----PKSPVAMELHRILQR-YKLSKRYFKRLIEARLNKLSGSIFVDLESLE 147          
BLAST of mRNA_P-wetherbeei_contig905.1.1 vs. uniprot
Match: UPI0013F27F6D (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 n=2 Tax=Odontomachus brunneus TaxID=486640 RepID=UPI0013F27F6D)

HSP 1 Score: 84.3 bits (207), Expect = 6.770e-16
Identity = 51/138 (36.96%), Postives = 83/138 (60.14%), Query Frame = 0
Query:   73 RLSEATQRLMSPDAYCSKVVRNGDYFGYLCTTLLRPPTARPAALAVRAFNLETSLLAE-TEPGKILALQVRMEWWSNALNELYANPSSRQLPAQPVIQALSGALSRGSNLTKRWFERMLEARLAELQGARPQSIKDLE 209
            R+S +T++  +P  YC ++VRN DY  +LCT LL P   R AA A+RAFN+E + + +  +  KI A+  R+++W++ LN +Y +      P  PV   L   L R   L+KR+F+R+++ARL +L  +    ++ LE
Sbjct:   18 RMSTSTKQRQTPPEYCLQLVRNSDYENFLCTLLL-PHNIRSAAFAIRAFNVEVAQVEDQVKDNKIGAM--RLQFWTDTLNNIYNDHP----PRSPVAMELHRILQR-HKLSKRYFKRLIDARLKKLNNSIFVDLESLE 147          
BLAST of mRNA_P-wetherbeei_contig905.1.1 vs. uniprot
Match: A0A484NLU8_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484NLU8_9ASTE)

HSP 1 Score: 84.0 bits (206), Expect = 8.610e-16
Identity = 51/123 (41.46%), Postives = 71/123 (57.72%), Query Frame = 0
Query:   75 SEATQRLMSPDAYCSKVVRNGDYFGYLCTTLLRPPTARPAALAVRAFNLETSLLAETEPGKILALQVRMEWWSNALNELYANPSSRQLPAQPVIQALSGA-LSRGSNLTKRWFERMLEARLAE 196
            S ++  L +  +YC + VRN DY  YLC   L PPT R AA A+RAFN+ETS   +      + L +R+ WW  AL +LYAN   +     PV QAL+   LS  + ++K W +R +EAR+ E
Sbjct:    6 SSSSGSLRAALSYCVQQVRNYDYHHYLCLLEL-PPTMRKAAFALRAFNVETSRAMDVSSDPNIGL-MRLLWWQEALEKLYANKQVKH----PVAQALASVVLSSETKISKSWLKRSVEARIKE 122          
BLAST of mRNA_P-wetherbeei_contig905.1.1 vs. uniprot
Match: UPI00125D33E8 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 n=5 Tax=Ipomoea TaxID=4119 RepID=UPI00125D33E8)

HSP 1 Score: 84.0 bits (206), Expect = 1.740e-15
Identity = 65/196 (33.16%), Postives = 99/196 (50.51%), Query Frame = 0
Query:   17 FFQRIPQVPEELPIGTATALLHRRTEGSLIFPSPFYNMQTATRRSCTLVVRRNGNRRLSEATQRLMSPDAYCSKVVRNGDYFGYLCTTLLRPPTARPAALAVRAFNLETSLLAETEPGKILALQVRMEWWSNALNELYANPSSRQLPAQPVIQALSGALSRGSNLTKRWFERMLEARLAELQGAR---PQSIKDLE 209
            F  R P V E     +   L   R   S + P P Y + TA   +C    R       + ++  L +  +YC + VRN DY  YLC   L PP  R AA A+ AFN+ETS   +      + L +R+ WW  AL++LYAN S       PV QAL+  +S+ + ++K W +R +EAR+ + +      P+++++LE
Sbjct:   21 FIHRRPIVTES---PSPLQLYGLRAHSSPVLP-PIYAIATAN--NCVHSDRTEDLMSGASSSGGLRAALSYCVQQVRNYDYHNYLCLLEL-PPNMRKAAFALCAFNVETSRAMDVSSNPKIGL-MRLLWWQEALDKLYANKSIEH----PVAQALASVISQ-NKISKSWLKRSVEARINDARREHTDVPKTVEELE 203          
BLAST of mRNA_P-wetherbeei_contig905.1.1 vs. uniprot
Match: A0A3R7J1V0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J1V0_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 8.550e-15
Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 0
Query:   93 RNGDYFGYLCTTLLRPPTARPAALAVRAFNLETSLLAETEPGKILALQVRMEWWSNALNELYANPSS-RQLPAQPVIQALSGALSRGSNLTKRWFERMLEARLAELQGARPQSIKDLE 209
            R  DY GYLC  LL P   RP+  A+RA N E + + ++     +  ++RM+WW + +  LYA PS+ R   +  ++Q L  A+    +LT+RWFER+L+AR  +L     QS+ +LE
Sbjct:   11 RKLDYDGYLCGLLL-PIKTRPSYFAIRALNAEVATIKDSVHSNHVTGKIRMQWWRDRIFGLYAAPSAERPQQSTALLQGLDTAIQE-HDLTRRWFERLLDARDQDLDHDEMQSLHELE 126          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig905.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSI4_ECTSI6.350e-2237.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CW87_9STRA1.110e-1940.65Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A061S9Y5_9CHLO1.040e-1635.46NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A8C4T0L5_ERPCA3.080e-1637.69NADH:ubiquinone oxidoreductase complex assembly fa... [more]
A0A2P2JAN0_RHIMU6.330e-1637.91Uncharacterized protein n=2 Tax=Rhizophora mucrona... [more]
UPI00063F31F36.530e-1638.24NADH dehydrogenase (ubiquinone) complex I, assembl... [more]
UPI0013F27F6D6.770e-1636.96NADH dehydrogenase (ubiquinone) complex I, assembl... [more]
A0A484NLU8_9ASTE8.610e-1641.46Uncharacterized protein n=1 Tax=Cuscuta campestris... [more]
UPI00125D33E81.740e-1533.16NADH dehydrogenase (ubiquinone) complex I, assembl... [more]
A0A3R7J1V0_9STRA8.550e-1538.14Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002060Squalene/phytoene synthasePFAMPF00494SQS_PSYcoord: 96..209
e-value: 3.0E-14
score: 53.2
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10Farnesyl Diphosphate Synthasecoord: 74..210
e-value: 1.5E-15
score: 59.4
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 85..209
NoneNo IPR availablePANTHERPTHR21181:SF13NADH DEHYDROGENASE (UBIQUINONE) COMPLEX I, ASSEMBLY FACTOR 6coord: 70..210
NoneNo IPR availablePANTHERPTHR21181FAMILY NOT NAMEDcoord: 70..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig905contigP-wetherbeei_contig905:751..1485 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig905.1.1mRNA_P-wetherbeei_contig905.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig905 153..1492 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig905.1.1 ID=prot_P-wetherbeei_contig905.1.1|Name=mRNA_P-wetherbeei_contig905.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=211bp
MGFEHRSVSFSISASDFFQRIPQVPEELPIGTATALLHRRTEGSLIFPSP
FYNMQTATRRSCTLVVRRNGNRRLSEATQRLMSPDAYCSKVVRNGDYFGY
LCTTLLRPPTARPAALAVRAFNLETSLLAETEPGKILALQVRMEWWSNAL
NELYANPSSRQLPAQPVIQALSGALSRGSNLTKRWFERMLEARLAELQGA
RPQSIKDLET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002060Squ/phyt_synthse
IPR008949Isoprenoid_synthase_dom_sf