prot_P-wetherbeei_contig9024.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9024.1.1
Unique Nameprot_P-wetherbeei_contig9024.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length110
Homology
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BLAST of mRNA_P-wetherbeei_contig9024.1.1 vs. uniprot
Match: D7FM73_ECTSI (Fibronectin type-III domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM73_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 1.720e-26
Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 0 
Query:    9 VPRLRYKACDLESITLEWDTVPGMNYKLEFRGIDQPTWMTARSLDVQ-------SVPVRIEDLEPSASYLFRLSAIKD-GTLIGPGPEVAFDTEVVSCAPKSSSCCAIT 109
            VP+L++K C+L+SITL W+   G  YKLEFR I    W   RS+ +         +  ++  L PS+SY+FRL  +   G  +GPGPE+AFDTEVVSCAP + SCC I+
Sbjct:    3 VPQLQFKDCELDSITLSWERAEGTGYKLEFREILVSDWAGCRSIAIAPEQSSSTEMSTKVTGLNPSSSYIFRLYTVTAAGQEVGPGPEIAFDTEVVSCAPTNKSCCTIS 111
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BLAST of mRNA_P-wetherbeei_contig9024.1.1 vs. uniprot
Match: A0A835YPU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU1_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.980e-26
Identity = 55/110 (50.00%), Postives = 73/110 (66.36%), Query Frame = 0 
Query:    6 AATVPRLRYKACDLESITLEWDTVPGMNYKLEFRGIDQPTWMTARSLDVQSVP-----VRIEDLEPSASYLFRLSAI-KDGTLIGPGPEVAFDTEVVSCAPKSSS-CCAI 108
            AA +P LR+++CDLES+TLEW   PG+ YKLEFR +++  W +A SL +         V++ DL PS +Y+FRL  +   G L GPGP+ AFDTEVVSC P S S CC +
Sbjct:    5 AAKLPVLRFQSCDLESLTLEWAGEPGVEYKLEFRDVNRKGWDSAFSLRIPPSQTGHETVKVTDLLPSMTYIFRLWIMGAGGKLEGPGPDTAFDTEVVSCTPTSRSVCCGV 114
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9024.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM73_ECTSI1.720e-2646.79Fibronectin type-III domain-containing protein n=2... [more]
A0A835YPU1_9STRA2.980e-2650.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 8..106
e-value: 2.3E-7
score: 32.9
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 9..96
score: 9.444187
IPR003961Fibronectin type IIICDDcd00063FN3coord: 9..93
e-value: 1.08017E-9
score: 49.4171
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 10..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9024contigP-wetherbeei_contig9024:640..1148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9024.1.1mRNA_P-wetherbeei_contig9024.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9024 640..1148 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9024.1.1 ID=prot_P-wetherbeei_contig9024.1.1|Name=mRNA_P-wetherbeei_contig9024.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp
MKADIAATVPRLRYKACDLESITLEWDTVPGMNYKLEFRGIDQPTWMTAR
SLDVQSVPVRIEDLEPSASYLFRLSAIKDGTLIGPGPEVAFDTEVVSCAP
KSSSCCAIT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR003961FN3_dom
IPR036116FN3_sf