prot_P-wetherbeei_contig8852.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8852.2.1
Unique Nameprot_P-wetherbeei_contig8852.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length453
Homology
BLAST of mRNA_P-wetherbeei_contig8852.2.1 vs. uniprot
Match: A0A2V0PJ83_9CHLO (Peptidase S59 domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PJ83_9CHLO)

HSP 1 Score: 62.8 bits (151), Expect = 1.100e-6
Identity = 44/91 (48.35%), Postives = 50/91 (54.95%), Query Frame = 0
Query:  239 SAGTKALMNVVTAMPAYQNRSLEELRWEDYQRA-KGVGPPPQPL------PQQQPTASLFGSAPRAGGGLFGAPAPAPAAFGA-APASAFG 321
            SAG     N +TA+PAY N+S+EELRWEDYQ   K     P P       P  QP    FG++P      FGA APA   FGA APAS FG
Sbjct:  233 SAGAAVYYNTITALPAYANKSVEELRWEDYQAGVKNASAAPAPAGGGFGTPASQPAFGGFGASPAP---AFGAAAPAANPFGAPAPASPFG 320          
BLAST of mRNA_P-wetherbeei_contig8852.2.1 vs. uniprot
Match: A0A6A0A546_HAELA (Nuclear pore complex NUP98A isoform X1 isoform B n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A6A0A546_HAELA)

HSP 1 Score: 61.2 bits (147), Expect = 1.530e-6
Identity = 45/91 (49.45%), Postives = 54/91 (59.34%), Query Frame = 0
Query:  249 VTAMPAYQNRSLEELRWEDYQ---RAKGVGPPPQPLPQQQPTASLFGSAPRAGGGLFGAPAPAP---AAFGAAPAS----AFGTTATGAGG 329
            +TAMPAY ++S+EELRWEDYQ   ++   GP P P      T   FGSAP A  G FGA AP P   + FGA PA+    AFG  +T A G
Sbjct:   41 ITAMPAYLSKSMEELRWEDYQQGVKSAAAGPAPAPASPFGSTPGAFGSAP-ATTGAFGAAAPNPFGASVFGAQPATTSPPAFGAASTPAFG 130          
BLAST of mRNA_P-wetherbeei_contig8852.2.1 vs. uniprot
Match: A0A3Q3E3G4_9LABR (Nuclear pore complex protein Nup98-Nup96 n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3E3G4_9LABR)

HSP 1 Score: 60.1 bits (144), Expect = 7.610e-6
Identity = 73/199 (36.68%), Postives = 89/199 (44.72%), Query Frame = 0
Query:  145 AFGAPAPXXXGLFGTGGATSTFGRTTTGSLFGQPAPAPSASPFGQATQQGSSLFGXXXXXXXXXGFATGXXXXXXXXXXXXXXXXXAPPV--HTQDSAGTKALMNV----VTAMPAYQNRSLEELRWEDYQRAKGVGPPPQPLPQQQPTASLFGSAPR---AGGGLFGAPAPAPA--------AFGAAPASAFGTTATG 326
            AF A  P   G FGT         T++G LFG  + A +A+PFG      +SLFG         GF+                    PP    T   AG    +N     +TAM  Y+N+SLEELR EDYQ  +  GP     P   PT S+FG+AP    A  GLFGA AP  +         FGA PA+ FG TA G
Sbjct:  101 AFSANKPTSFGSFGT--------STSSGGLFGATSTA-TANPFGGT----ASLFGGA-------GFSA--------TQQPGTTVKFNPPTGSDTMVKAGVTTNINTKHQCITAMKEYENKSLEELRLEDYQAGR-KGPT---TPMAAPTGSMFGAAPATSSAATGLFGATAPNTSFSFGPNKSTFGATPAAGFGATAGG 267          
BLAST of mRNA_P-wetherbeei_contig8852.2.1 vs. uniprot
Match: A0A3Q3KX26_9LABR (Nuclear pore complex protein Nup98-Nup96 n=5 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3KX26_9LABR)

HSP 1 Score: 60.1 bits (144), Expect = 7.660e-6
Identity = 73/199 (36.68%), Postives = 89/199 (44.72%), Query Frame = 0
Query:  145 AFGAPAPXXXGLFGTGGATSTFGRTTTGSLFGQPAPAPSASPFGQATQQGSSLFGXXXXXXXXXGFATGXXXXXXXXXXXXXXXXXAPPV--HTQDSAGTKALMNV----VTAMPAYQNRSLEELRWEDYQRAKGVGPPPQPLPQQQPTASLFGSAPR---AGGGLFGAPAPAPA--------AFGAAPASAFGTTATG 326
            AF A  P   G FGT         T++G LFG  + A +A+PFG      +SLFG         GF+                    PP    T   AG    +N     +TAM  Y+N+SLEELR EDYQ  +  GP     P   PT S+FG+AP    A  GLFGA AP  +         FGA PA+ FG TA G
Sbjct:  120 AFSANKPTSFGSFGT--------STSSGGLFGATSTA-TANPFGGT----ASLFGGA-------GFSA--------TQQPGTTVKFNPPTGSDTMVKAGVTTNINTKHQCITAMKEYENKSLEELRLEDYQAGR-KGPT---TPMAAPTGSMFGAAPATSSAATGLFGATAPNTSFSFGPNKSTFGATPAAGFGATAGG 286          
BLAST of mRNA_P-wetherbeei_contig8852.2.1 vs. uniprot
Match: A0A671V005_SPAAU (Nuclear pore complex protein Nup98-Nup96 n=6 Tax=Sparus aurata TaxID=8175 RepID=A0A671V005_SPAAU)

HSP 1 Score: 58.9 bits (141), Expect = 1.760e-5
Identity = 77/200 (38.50%), Postives = 90/200 (45.00%), Query Frame = 0
Query:  145 AFGAPAPXXXGLFGTGGATSTFGRTTTGSLFGQPAPAPSASPFGQATQQGSSLFGXXXXXXXXXGFATGXXXXXXXXXXXXXXXXXAPPV--HTQDSAGTKALMNV----VTAMPAYQNRSLEELRWEDYQRAKGVGPPPQPLPQQQPTASLFGSAPRAGG---GLFGAPAP--------APAAFGAAPASAFGT-TATG 326
            AFGA  P   G FGT         T++G LFG  A   +++PFG AT    SLFG         GF+                    PP    T   AG    +N     +TAM  Y+N+SLEELR EDYQ  +  GP     P    T SLFGSAP       GLFGA AP          + FGAAPA+A G  TATG
Sbjct:  111 AFGANKPTSFGSFGT--------STSSGGLFG--ATNTASNPFGGAT----SLFGGS-------GFSAAQQPGTTVKFN--------PPTGSDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGR-KGPT---NPMAAATGSLFGSAPATSSTATGLFGAAAPNSSFSFGQTKSTFGAAPAAAGGFGTATG 277          
BLAST of mRNA_P-wetherbeei_contig8852.2.1 vs. uniprot
Match: A0A8J9RNK2_9CHLO (Nuclear pore complex protein Nup98-Nup96 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RNK2_9CHLO)

HSP 1 Score: 57.4 bits (137), Expect = 5.290e-5
Identity = 40/87 (45.98%), Postives = 49/87 (56.32%), Query Frame = 0
Query:  234 VHTQDSAGTKALM--NVVTAMPAYQNRSLEELRWEDYQRA----KGVGPPPQPLPQQQPTA-SLFGSAPRA----GGGLFGAPAPAP 309
            V +  S G K  +  N ++AMP YQN+  EELRWEDYQ       G  P  QP P  QP A S+FG AP+A    G   FG+ +PAP
Sbjct:  198 VDSSTSGGQKQTIFFNSISAMPQYQNKCPEELRWEDYQAGVKGNTGAAPAAQPGPFGQPAAPSIFGKAPQASSPFGQTTFGSTSPAP 284          
BLAST of mRNA_P-wetherbeei_contig8852.2.1 vs. uniprot
Match: A0A4Z2FC61_9TELE (Nuclear pore complex protein Nup98-Nup96 n=1 Tax=Liparis tanakae TaxID=230148 RepID=A0A4Z2FC61_9TELE)

HSP 1 Score: 57.0 bits (136), Expect = 6.230e-5
Identity = 75/204 (36.76%), Postives = 85/204 (41.67%), Query Frame = 0
Query:  143 SLAFGAPAPXXXGLFGTGGATSTFGRTTTGSLFGQPAPAPSASPFGQATQQGSSLFGXXXXXXXXXGFATGXXXXXXXXXXXXXXXXXAPPVHTQD--SAGTKALMNV----VTAMPAYQNRSLEELRWEDYQRAKGVGPPPQPLPQQQPTASLFGSAP---RAGGGLFGAPAPAP--------AAFGAAPASAFGTTATGAGG 329
            S AFGA  P   G FGT         TT G LFG      S +PFG A    +SLFG         GF                     PP  T     AG    +N     +TAM  Y+N+SLEELR EDYQ  +  GP     P   PT S+FG+A     A  GLFGA AP            FGAA  +A G  A  AGG
Sbjct:  108 SNAFGAQKPTTFGSFGT--------STTAGGLFGXXXXXXS-NPFGGAAAGVASLFGGS-------GFTAAQQQPGTTVKFN-------PPTGTDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRMEDYQAGR-KGPA---NPMAAPTGSMFGAAAVTSSAATGLFGAAAPNTNFSFGQNKTTFGAAAPAAAGFGAAAAGG 284          
BLAST of mRNA_P-wetherbeei_contig8852.2.1 vs. uniprot
Match: UPI00187CF99C (nuclear pore complex protein Nup98-Nup96 isoform X1 n=5 Tax=Acanthopagrus latus TaxID=8177 RepID=UPI00187CF99C)

HSP 1 Score: 56.6 bits (135), Expect = 9.230e-5
Identity = 76/200 (38.00%), Postives = 89/200 (44.50%), Query Frame = 0
Query:  145 AFGAPAPXXXGLFGTGGATSTFGRTTTGSLFGQPAPAPSASPFGQATQQGSSLFGXXXXXXXXXGFATGXXXXXXXXXXXXXXXXXAPPV--HTQDSAGTKALMNV----VTAMPAYQNRSLEELRWEDYQRAKGVGPPPQPLPQQQPTASLFGSAPRAGG---GLFGAPAPAPA--------AFGAAPASAFGT-TATG 326
            AFGA  P   G FGT         T++G LFG  A   +++PFG AT    SLFG         GF+                    PP    T   AG    +N     +TAM  Y+N+SLEELR EDYQ  +  GP     P    T SLFGSAP       GLFGA AP  +         FGAAPA+  G  TATG
Sbjct:  111 AFGANKPTSFGSFGT--------STSSGGLFG--ATNTASNPFGGAT----SLFGGS-------GFSAAQQPGTTVKFN--------PPTGSDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGR-KGPT---NPMAAATGSLFGSAPATSSTATGLFGAAAPNSSFSFGQNKTTFGAAPAATGGFGTATG 277          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8852.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V0PJ83_9CHLO1.100e-648.35Peptidase S59 domain-containing protein n=1 Tax=Ra... [more]
A0A6A0A546_HAELA1.530e-649.45Nuclear pore complex NUP98A isoform X1 isoform B n... [more]
A0A3Q3E3G4_9LABR7.610e-636.68Nuclear pore complex protein Nup98-Nup96 n=1 Tax=L... [more]
A0A3Q3KX26_9LABR7.660e-636.68Nuclear pore complex protein Nup98-Nup96 n=5 Tax=L... [more]
A0A671V005_SPAAU1.760e-538.50Nuclear pore complex protein Nup98-Nup96 n=6 Tax=S... [more]
A0A8J9RNK2_9CHLO5.290e-545.98Nuclear pore complex protein Nup98-Nup96 n=1 Tax=C... [more]
A0A4Z2FC61_9TELE6.230e-536.76Nuclear pore complex protein Nup98-Nup96 n=1 Tax=L... [more]
UPI00187CF99C9.230e-538.00nuclear pore complex protein Nup98-Nup96 isoform X... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.2360coord: 223..272
e-value: 2.5E-10
score: 42.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..453
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 398..418

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8852contigP-wetherbeei_contig8852:492..2045 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8852.2.1mRNA_P-wetherbeei_contig8852.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8852 492..2045 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8852.2.1 ID=prot_P-wetherbeei_contig8852.2.1|Name=mRNA_P-wetherbeei_contig8852.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=453bp
FGQPQQQQQQGAGGAFGGGSTFGGGGGTGGGLFGSGGTTAAPFGGGGGTS
AFGGTGTSTAPTSGFGGFGTTTASNTTATAGFGGGFGTTPSTAAGGGSGG
LFGQPVAPAPVAGFGGFGAAPAPSPFSGTAGASAFGGGGAGGSLAFGAPA
PAGSGLFGTGGATSTFGRTTTGSLFGQPAPAPSASPFGQATQQGSSLFGG
GGGGAAGGGFATGGFGGFGTSSGFTTGAFGAPPVHTQDSAGTKALMNVVT
AMPAYQNRSLEELRWEDYQRAKGVGPPPQPLPQQQPTASLFGSAPRAGGG
LFGAPAPAPAAFGAAPASAFGTTATGAGGAAGGFGGFGSASRGLFGAPAP
AQAPFGFGGTPAGGTTAAGTGTTFGGFGTTGVGGGGGGGLFGSTAAGSTF
GGFGQPQQQQQQQQRPGGTFGFGAPAPAPASTFGTSNGGLFGGGGGGQVG
AFG
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