prot_P-wetherbeei_contig8842.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8842.2.1
Unique Nameprot_P-wetherbeei_contig8842.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length350
Homology
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BLAST of mRNA_P-wetherbeei_contig8842.2.1 vs. uniprot
Match: A0A836CEN0_9STRA (Fibronectin type-III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN0_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 8.470e-14
Identity = 94/355 (26.48%), Postives = 157/355 (44.23%), Query Frame = 0 
Query:    1 MSVTLSSVAVTTDDYAVLSVSDVRCTSVTLYWKNMSANAATFRILQG--DDRTTALSGVSVDGKATTSQTIRGLTSGTAYKFVLQRDEFGTYVDQTSNQSGSAYALVNTLHTSLSLAVASSSGTVQWPQTYSGASYTLTYIQLQDGVSTGSSTSITDSNIVLSAGVHKATLAS-LSKNTSYEVALYVNESQPNGTASVLLDSKTLTTSDSVQMAISGIYASYANLSWSGDGSTYYRIIDDSGKVRVSPTLDSVA--SVTNLTPGTTYNLILQALQLDGT-YATQSWSTVVARSTALTVAGVGSSSISLQWNSLYDAAHYSVRYTTDQTTWKEYSVTSFTDVAAVLTSLVPGTAYT 349
            M+  +++V   TD YA +S+      S+ + + N S+ AA FR++ G   +       V V   A  +  + GLT G  Y F LQR E   YVDQ     G       TL   + ++ ++ S  V W      A+     +    G   G+  ++  +    S+   K  LAS L     Y V +   E    G   VLL S    TS    + +  + AS A +SW+G+ S+ YR+++      ++  L   A  S+ NL   T Y++ +++L++DG+ +  +  ++    S+ LTV   G+  I+L+W   Y  A Y + Y             + +  +  ++ L P TAYT
Sbjct:    1 MAAPIATVNFKTDAYAAMSIDTCTFGSIGVQFTNPSSAAARFRVMAGAIGEAMAPAGEVLVQPGAKATAVVTGLTPGRPYTFGLQRSENAAYVDQVQ---GKGNPTKTTLSVDIKVSTSADSALVSWTDLAEAAAIGFEVVLTPAG---GAKKTLAGTPYARSS--LKNLLASDLVTGVQYTVEVIAVE----GANRVLLGSVPFKTSAGAAIKVGTVRASTAYISWTGEESSVYRLVEGKTGALLADGLRGGAGLSLKNLVKATDYSVAMESLRVDGSSWLREGSASFTTASSLLTVKSFGTGFIALEWTQAYAGASYVLAYAAGAAPAVPLGTLTTSATSMTVSGLKPSTAYT 343
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8842.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CEN0_9STRA8.470e-1426.48Fibronectin type-III domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 289..350
e-value: 3.4E-6
score: 27.3
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 286..350
score: 11.274505
IPR003961Fibronectin type IIICDDcd00063FN3coord: 288..350
e-value: 1.06093E-5
score: 41.7131
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 285..350
e-value: 4.3E-8
score: 35.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 16..107
e-value: 4.4E-7
score: 31.9
NoneNo IPR availablePANTHERPTHR46708TENASCINcoord: 13..279
coord: 148..350
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 18..82
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 289..350
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 115..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8842contigP-wetherbeei_contig8842:1482..2531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8842.2.1mRNA_P-wetherbeei_contig8842.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8842 1482..2531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8842.2.1 ID=prot_P-wetherbeei_contig8842.2.1|Name=mRNA_P-wetherbeei_contig8842.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=350bp
MSVTLSSVAVTTDDYAVLSVSDVRCTSVTLYWKNMSANAATFRILQGDDR
TTALSGVSVDGKATTSQTIRGLTSGTAYKFVLQRDEFGTYVDQTSNQSGS
AYALVNTLHTSLSLAVASSSGTVQWPQTYSGASYTLTYIQLQDGVSTGSS
TSITDSNIVLSAGVHKATLASLSKNTSYEVALYVNESQPNGTASVLLDSK
TLTTSDSVQMAISGIYASYANLSWSGDGSTYYRIIDDSGKVRVSPTLDSV
ASVTNLTPGTTYNLILQALQLDGTYATQSWSTVVARSTALTVAGVGSSSI
SLQWNSLYDAAHYSVRYTTDQTTWKEYSVTSFTDVAAVLTSLVPGTAYTI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR036116FN3_sf