prot_P-wetherbeei_contig8779.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8779.1.1
Unique Nameprot_P-wetherbeei_contig8779.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length275
Homology
BLAST of mRNA_P-wetherbeei_contig8779.1.1 vs. uniprot
Match: D8LCY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY6_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 4.110e-27
Identity = 77/189 (40.74%), Postives = 115/189 (60.85%), Query Frame = 0
Query:   42 TGRPT-YMEMARDAIVHLNDRNGSSLPAIRKWVAINYRETQQKQKASFNSLTLKALSRLVSEGVLDKTKGSFRFTDEYMREALRRERDTAVARGGT--ALLKFQAKESALGKGKG---ADTRYGGGAFERFEHNKGVRKELEASRLRRDAFLGVRRAVLMPFMQDGDNYFTRIDREAILKKMDTEEEEE 224
            TGR + Y+ M  ++I  LN+++G SLP+IRKW+   + ET++KQKASFN+LT+KA+ +LVSEGV++K K S+R   + + +     ++    +GG+  A+L  QAK      G G   A  R  GG  E  E N+ +R  +E    +R+ FL  RRA L+PFMQ  DN+F R+D+   L +    EEE+
Sbjct:  105 TGRKSKYLTMVLESISALNEKSGVSLPSIRKWIQDKHPETKEKQKASFNNLTIKAVMKLVSEGVVEKVKHSYRLFPKCVADEKASAKEEPRRKGGSTPAVLTPQAKTGRKPSGTGRKPAAPRATGGRGEAAEANRKMRATMEEVARKRNEFLSKRRAFLLPFMQASDNFFARMDKSLALGQQQQLEEED 293          
BLAST of mRNA_P-wetherbeei_contig8779.1.1 vs. uniprot
Match: A0A7R9Y7W9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y7W9_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.120e-18
Identity = 70/212 (33.02%), Postives = 111/212 (52.36%), Query Frame = 0
Query:   43 GRPTYMEMARDAIVHLND-------RNGSSLPAIRKWVAINYRETQQKQKASFNSLTLKALSRLVSEGVLDKTKGSFRFTDEYMREALRRERDTAVA----RGGTALLKFQAKESALGKGKGADTRYGGG----------------AFERFE--------HNKGVRKELEASRLRRDAFLGVRRAVLMPFMQDGDNYFTRIDREAILKKMDT 219
            G  TY +M  DAI +L         R+G +LPAIRK +     E +QKQ+ASFNSLTLKA+ RL+++ VL+K    +RF  +Y+ + ++R    A++    +GG   LK Q  +    + +G D R G                  A +  E        HN+ +R+E+E  +++RD F+  R A+L PF+ + DNYF + +R  +++   T
Sbjct:  148 GNRTYADMCMDAISNLGATHGGRAARDGFTLPAIRKSLMSVCPEVKQKQRASFNSLTLKAMQRLIAQSVLEKNGSQYRFHPDYI-DRIKRAEAAALSFEKGKGGDGRLKGQGLKVMTPRRRGRDYRDGRAREHAAYLSLRQAERQKAVKMNESLNQAWNSHNRALRQEMEEKKMKRDDFMEERIAILTPFLPEDDNYFLQKERRMMMEAWKT 358          
BLAST of mRNA_P-wetherbeei_contig8779.1.1 vs. uniprot
Match: A0A6H5KTV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV3_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 7.240e-15
Identity = 70/199 (35.18%), Postives = 108/199 (54.27%), Query Frame = 0
Query:   40 SKTGRPT-YMEMARDAIVHLNDRNGSSLPAIRKWVAINYRETQQKQKASFNSLTLK--ALSRLVSEGVLDKTKGSFRFTDEYMREALRRERDTAVARGGT--ALL------KFQAKESALGKGKGADTRYGGGAFERFEHNKGVRKELEASRLRRDAFLGVRRAVL-MPFMQDGDNYFTRIDREAI---LKKMDTEEEE 223
            + TGR + Y+ M  ++I  LND++G SLP+IRKW+   + ET++KQKASFN+LT+K  A+ +LVSEG ++K K S+R + + + +     +     +GG+  A++      K   K S  G+ K A  R  GG  E  E N+ +R  +E    +R+ FL  R   L     +D D     I  EA    L+K + E E+
Sbjct:  103 TSTGRKSKYLTMVLESISALNDKSGVSLPSIRKWIQDKHPETKEKQKASFNNLTIKVQAVMKLVSEGAVEKVKHSYRLSPKCVADEKASAKAEPRRKGGSTPAVITPQEEAKTGRKSSGTGR-KPAAARAAGGKGEASEANRKMRATMEEVARKRNEFLSKRSLALGQQLEKDRDKATENIAAEAANPDLRKAEVETEQ 300          
BLAST of mRNA_P-wetherbeei_contig8779.1.1 vs. uniprot
Match: W7TYI9_9STRA (Swi snf matrix actin dependent regulator of subfamily member 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYI9_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 7.770e-11
Identity = 39/84 (46.43%), Postives = 59/84 (70.24%), Query Frame = 0
Query:   38 PRSK-TGRPTYMEMARDAIVHLNDRNGSSLPAIRKWVAINYRETQQKQKASFNSLTLKALSRLVSEGVLDK-TKGSFRFTDEYM 119
            P++K TG+ TY ++  +A+  L+ R+G+SL AIRKW+  +  E   KQKASFN+LT KA+ +L +E V+ + TK SFRF+  Y+
Sbjct:  144 PKTKITGKATYADLIIEALKELHGRDGASLVAIRKWICKHNAEAASKQKASFNTLTKKAILKLEAEDVVQRNTKSSFRFSPSYL 227          
BLAST of mRNA_P-wetherbeei_contig8779.1.1 vs. uniprot
Match: A0A5N5JHS4_9PEZI (Histone H1 n=2 Tax=Coniochaeta sp. 2T2.1 TaxID=1571157 RepID=A0A5N5JHS4_9PEZI)

HSP 1 Score: 57.0 bits (136), Expect = 4.610e-6
Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 0
Query:   40 SKTGRPTYMEMARDAIVHLNDRNGSSLPAIRKWVAINYRETQQKQKASFNSLTLKALSRLVSEGVLDKTKG 110
            S +G  +Y EM ++AI+ L +RNGSS PA++K+V  N    +  Q   F+SL  +AL   V +GV ++ KG
Sbjct:   17 SSSGHASYQEMIKEAIISLKNRNGSSRPALKKYVKANNPHLKDVQDTMFDSLFNRALKNGVEKGVFEQPKG 87          
BLAST of mRNA_P-wetherbeei_contig8779.1.1 vs. uniprot
Match: C1FDJ1_MICCC (H15 domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1FDJ1_MICCC)

HSP 1 Score: 53.5 bits (127), Expect = 2.090e-5
Identity = 31/76 (40.79%), Postives = 41/76 (53.95%), Query Frame = 0
Query:   38 PRSKTGRPTYMEMARDAIVHLNDRNGSSLPAIRKWVAINYRETQQKQKASFNSLTLKALSRLVSEGVLDKTKGSFR 113
            P   T  P Y +M + AI+ L DRNGSS+PAI K++A NY     K   +F  +    L  LV  G L K K S++
Sbjct:    2 PPKATAHPKYEDMVKAAILALKDRNGSSVPAIAKYLAANY-----KLPDNFKKILSTQLKNLVKSGKLLKVKASYK 72          
BLAST of mRNA_P-wetherbeei_contig8779.1.1 vs. uniprot
Match: A0A7S0KFT2_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KFT2_MICPS)

HSP 1 Score: 51.6 bits (122), Expect = 5.080e-5
Identity = 30/76 (39.47%), Postives = 40/76 (52.63%), Query Frame = 0
Query:   38 PRSKTGRPTYMEMARDAIVHLNDRNGSSLPAIRKWVAINYRETQQKQKASFNSLTLKALSRLVSEGVLDKTKGSFR 113
            P      P Y +M + AI+ L DRNGSS+PAI K++A NY     K   +F  +    L  LV  G L K K S++
Sbjct:    2 PPKAAAHPKYEDMVKAAILALKDRNGSSVPAIAKYLAANY-----KLPDNFKKILSTQLKNLVKSGKLLKVKASYK 72          
BLAST of mRNA_P-wetherbeei_contig8779.1.1 vs. uniprot
Match: Q39576_CHLRE (Histone H1 n=3 Tax=Chlamydomonas TaxID=3052 RepID=Q39576_CHLRE)

HSP 1 Score: 53.5 bits (127), Expect = 8.000e-5
Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 0
Query:   45 PTYMEMARDAIVHLNDRNGSSLPAIRKWVAINY-RETQQKQKASFNSLTLKALSRLVSEGVLDKTKGSFRFTDEYMREA 122
            P Y+ M  +AI+ L +R+GSS+PAI+KW+   Y ++   K      SLTLK     V  G L K K SF+ ++E  + A
Sbjct:   28 PPYITMVSEAILALKERDGSSIPAIKKWIDAKYGKDIHDKNYPKTLSLTLKTF---VKSGKLIKVKNSFKLSEEVKKAA 103          
BLAST of mRNA_P-wetherbeei_contig8779.1.1 vs. uniprot
Match: A0A5B7A4T1_DAVIN (Putative Histone H1/H5 n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7A4T1_DAVIN)

HSP 1 Score: 53.9 bits (128), Expect = 8.340e-5
Identity = 31/78 (39.74%), Postives = 47/78 (60.26%), Query Frame = 0
Query:   36 RQPRSKTGRPTYMEMARDAIVHLNDRNGSSLPAIRKWVAINYRETQQKQKASFNSLTLKALSRLVSEGVLDKTKGSFR 113
            ++PR+    P Y+EM ++AIV L +RNGSS  AI K+      E  ++  ++F  L L  L +LV+ G L K KGS++
Sbjct:   49 KKPRNPPSHPPYIEMIKEAIVTLKERNGSSQYAIAKFAE----EKHKQLPSNFRKLLLVHLKKLVAAGKLVKVKGSYK 122          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8779.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LCY6_ECTSI4.110e-2740.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9Y7W9_9STRA2.120e-1833.02Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A6H5KTV3_9PHAE7.240e-1535.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TYI9_9STRA7.770e-1146.43Swi snf matrix actin dependent regulator of subfam... [more]
A0A5N5JHS4_9PEZI4.610e-640.85Histone H1 n=2 Tax=Coniochaeta sp. 2T2.1 TaxID=157... [more]
C1FDJ1_MICCC2.090e-540.79H15 domain-containing protein n=2 Tax=Micromonas T... [more]
A0A7S0KFT2_MICPS5.080e-539.47Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
Q39576_CHLRE8.000e-539.24Histone H1 n=3 Tax=Chlamydomonas TaxID=3052 RepID=... [more]
A0A5B7A4T1_DAVIN8.340e-539.74Putative Histone H1/H5 n=1 Tax=Davidia involucrata... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 41..111
e-value: 5.6E-16
score: 69.1
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 45..112
e-value: 2.7E-15
score: 56.4
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 43..116
score: 22.632366
IPR005818Linker histone H1/H5, domain H15CDDcd00073H15coord: 44..113
e-value: 2.78435E-17
score: 73.0391
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 39..127
e-value: 1.9E-16
score: 62.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..275
NoneNo IPR availablePANTHERPTHR11467:SF131HISTONE H1.1coord: 32..132
NoneNo IPR availablePANTHERPTHR11467HISTONE H1coord: 32..132
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 38..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8779contigP-wetherbeei_contig8779:133..2049 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8779.1.1mRNA_P-wetherbeei_contig8779.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8779 133..2049 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8779.1.1 ID=prot_P-wetherbeei_contig8779.1.1|Name=mRNA_P-wetherbeei_contig8779.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=275bp
GPVRTARPAAAAAVAAAASSDDVENLALGFDPEHFRQPRSKTGRPTYMEM
ARDAIVHLNDRNGSSLPAIRKWVAINYRETQQKQKASFNSLTLKALSRLV
SEGVLDKTKGSFRFTDEYMREALRRERDTAVARGGTALLKFQAKESALGK
GKGADTRYGGGAFERFEHNKGVRKELEASRLRRDAFLGVRRAVLMPFMQD
GDNYFTRIDREAILKKMDTEEEEEEPDYTGQRSSRDSPRGGGRAGRGGDG
SGGNSGGGMDGGDADGAGGGGDSAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf