prot_P-wetherbeei_contig8589.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8589.1.1
Unique Nameprot_P-wetherbeei_contig8589.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length136
Homology
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BLAST of mRNA_P-wetherbeei_contig8589.1.1 vs. uniprot
Match: D7FZN0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN0_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 4.470e-13
Identity = 52/126 (41.27%), Postives = 69/126 (54.76%), Query Frame = 0 
Query:    4 IGAVAVSAELGLVATASGGDIRLWDEMALEFEGGVLGHHADILKLLFLPGTPLLLAGDAAGAVAVWALRFVGKTAARECGEDSQLASHDGSTSSPAFGSTYSAVPAAAAAAIPADVPGVVADSGAR 129
            I A AVS +  L+ATA+GG+IRLW +  L F+GG+    AD+L L+FLPGT  LLA D+ G V +W   F         G  +       ++SSPA   T  A      AA+P+DV  V A S +R
Sbjct:  164 ISACAVSQDAQLIATAAGGEIRLWHKQDLTFQGGISDLDADVLGLVFLPGTACLLASDSGGDVVLWVAEFSKAAGEARAGNKTAAGGTRSTSSSPAVPDTRGAK-----AALPSDVE-VTAQSDSR 283
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BLAST of mRNA_P-wetherbeei_contig8589.1.1 vs. uniprot
Match: A0A6H5JSG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG1_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.020e-7
Identity = 35/92 (38.04%), Postives = 47/92 (51.09%), Query Frame = 0 
Query:    4 IGAVAVSAELGLVATASGGDIRLWDEMA----------------------LEFEGGVLGHHADILKLLFLPGTPLLLAGDAAGAVAVWALRF 73
            I A A+S +  L+ATA+GG+IRLW +                        L F+GG+    AD+L L+FLPGT  LLA D+ G V +W   F
Sbjct:  871 ISACAISQDAQLIATAAGGEIRLWHKQVWYQCSPFKLLRNMFESQVLIVDLSFQGGISDLDADVLGLVFLPGTACLLASDSGGDVVLWVTEF 962
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8589.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZN0_ECTSI4.470e-1341.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSG1_9PHAE2.020e-738.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..119
e-value: 2.8E-6
score: 28.5
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8589contigP-wetherbeei_contig8589:253..660 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8589.1.1mRNA_P-wetherbeei_contig8589.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8589 252..660 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8589.1.1 ID=prot_P-wetherbeei_contig8589.1.1|Name=mRNA_P-wetherbeei_contig8589.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=136bp
GSAIGAVAVSAELGLVATASGGDIRLWDEMALEFEGGVLGHHADILKLLF
LPGTPLLLAGDAAGAVAVWALRFVGKTAARECGEDSQLASHDGSTSSPAF
GSTYSAVPAAAAAAIPADVPGVVADSGARTRAVRHR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf