prot_P-wetherbeei_contig8585.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8585.1.1
Unique Nameprot_P-wetherbeei_contig8585.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length75
Homology
BLAST of mRNA_P-wetherbeei_contig8585.1.1 vs. uniprot
Match: A0A6H5J7N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7N1_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 9.380e-23
Identity = 39/73 (53.42%), Postives = 55/73 (75.34%), Query Frame = 0
Query:    2 DVSAKIRALHREPAAEDWHLCCVCMQNTRDAAIVHGATAHQICCFNCAMTIFLRGGDCPCCRRPIDVVVRNFL 74
            DV  +++A+H  P+ E +HLCCVC+   RDAA++HG TAHQ CC++CA+ +F RG  CP CR+PI  VV+NF+
Sbjct:  544 DVEQRLKAIHAGPSHEGFHLCCVCLDRPRDAALIHGKTAHQACCYDCAVELFERGLPCPYCRQPIAHVVKNFV 616          
BLAST of mRNA_P-wetherbeei_contig8585.1.1 vs. uniprot
Match: UPI0003F0E7FA (E3 ubiquitin-protein ligase Mdm2-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0E7FA)

HSP 1 Score: 72.8 bits (177), Expect = 2.890e-13
Identity = 32/74 (43.24%), Postives = 44/74 (59.46%), Query Frame = 0
Query:    1 SDVSAKIRALHREPAAEDWHLCCVCMQNTRDAAIVHGATAHQICCFNCAMTIFLRGGDCPCCRRPIDVVVRNFL 74
            S  SA+ RA +         LC +C    + A+I+HG T HQ+CC++CA  +   G  CP CRRPI +VV+NFL
Sbjct:  826 SSSSAEARAFN--------DLCMICSSKPKTASIIHGRTGHQVCCYSCAKKLRRHGKPCPVCRRPIQMVVKNFL 891          
BLAST of mRNA_P-wetherbeei_contig8585.1.1 vs. uniprot
Match: A0A6F9DL71_9ASCI (E3 ubiquitin-protein ligase Mdm2 n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DL71_9ASCI)

HSP 1 Score: 71.6 bits (174), Expect = 6.850e-13
Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   21 LCCVCMQNTRDAAIVHGATAHQICCFNCAMTIFLRGGDCPCCRRPIDVVVRNFL 74
            LC +C  N  DA IVHG   HQ CCF CA  +  RG +CP CR+PI +V++NF+
Sbjct:  370 LCNICRNNPNDATIVHGNNGHQFCCFRCAKRLKNRGKNCPVCRQPIMLVIKNFI 423          
BLAST of mRNA_P-wetherbeei_contig8585.1.1 vs. uniprot
Match: A0A6P4YUP8_BRABE (Protein Mdm4 n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YUP8_BRABE)

HSP 1 Score: 69.3 bits (168), Expect = 4.710e-12
Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 0
Query:   22 CCVCMQNTRDAAIVHGATAHQICCFNCAMTIFLRGGDCPCCRRPIDVVVRNFL 74
            C +C+   + A++VHG TAH +CC+ CA  ++ RG  CP CRRPI +VV+ F 
Sbjct:  506 CMICLSRPKVASMVHGRTAHLVCCYTCAKKLYKRGKPCPVCRRPIQMVVKTFF 558          
BLAST of mRNA_P-wetherbeei_contig8585.1.1 vs. uniprot
Match: A0A3M6UPB7_POCDA (Uncharacterized protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UPB7_POCDA)

HSP 1 Score: 67.8 bits (164), Expect = 1.530e-11
Identity = 28/71 (39.44%), Postives = 39/71 (54.93%), Query Frame = 0
Query:    3 VSAKIRALHREPAAEDWHLCCVCMQNTRDAAIVHGATAHQICCFNCAMTIFLRGGDCPCCRRPIDVVVRNF 73
            V+ K   L      +D   C +CM+  ++A ++HG T H  CC+ CA  +  RG  CP CR PID V+R F
Sbjct:  320 VTEKGNTLASPEDTDDNSKCIICMEQPKNATVIHGDTGHCCCCYACAQVLKQRGDPCPICRAPIDHVIRQF 390          
BLAST of mRNA_P-wetherbeei_contig8585.1.1 vs. uniprot
Match: UPI0006B085A3 (E3 ubiquitin-protein ligase Mdm2-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B085A3)

HSP 1 Score: 66.6 bits (161), Expect = 4.090e-11
Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0
Query:   22 CCVCMQNTRDAAIVHGATAHQICCFNCAMTIFLRGGDCPCCRRPIDVVVRNFL 74
            C +C+Q  +   ++HG TAHQ+CC+ CA  +   G  CP CRR I  VVRNF+
Sbjct:  387 CSLCLQRPKTGTMIHGRTAHQVCCYKCARRLQSSGQKCPVCRRTIQRVVRNFI 439          
BLAST of mRNA_P-wetherbeei_contig8585.1.1 vs. uniprot
Match: UPI00109BA2AF (uncharacterized protein LOC110244124 isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BA2AF)

HSP 1 Score: 66.2 bits (160), Expect = 5.390e-11
Identity = 24/58 (41.38%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   16 AEDWHLCCVCMQNTRDAAIVHGATAHQICCFNCAMTIFLRGGDCPCCRRPIDVVVRNF 73
            A+D   C +C++N ++A ++HG T H  CC++CA  +  RG  CP CR+ ID V++ F
Sbjct:  335 ADDGDECIICLENPKNATLIHGDTGHLCCCWSCAQVLKKRGDKCPICRQRIDHVIKQF 392          
BLAST of mRNA_P-wetherbeei_contig8585.1.1 vs. uniprot
Match: A0A7M5WWR9_9CNID (RING-type domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WWR9_9CNID)

HSP 1 Score: 65.9 bits (159), Expect = 6.970e-11
Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 0
Query:   22 CCVCMQNTRDAAIVHGATAHQICCFNCAMTIFLRGGDCPCCRRPIDVVVRNF 73
            C +C    ++A IVHG T H  CC +CA T+  RG +CP CR PID+V++ F
Sbjct:  307 CVICCSRRKNATIVHGNTGHVCCCISCANTMQQRGDNCPICRAPIDLVIKQF 358          
BLAST of mRNA_P-wetherbeei_contig8585.1.1 vs. uniprot
Match: A0A2B4SU88_STYPI (E3 ubiquitin-protein ligase Mdm2 n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SU88_STYPI)

HSP 1 Score: 65.5 bits (158), Expect = 9.920e-11
Identity = 28/71 (39.44%), Postives = 38/71 (53.52%), Query Frame = 0
Query:    3 VSAKIRALHREPAAEDWHLCCVCMQNTRDAAIVHGATAHQICCFNCAMTIFLRGGDCPCCRRPIDVVVRNF 73
            V+ K   L      +D   C +CM   ++A ++HG T H  CC+ CA  +  RG  CP CR PID V+R F
Sbjct:  307 VTEKGNTLAFPEDTDDNSKCIICMDQPKNATVIHGDTGHCCCCWACAQVLKQRGDPCPICRAPIDHVIRQF 377          
BLAST of mRNA_P-wetherbeei_contig8585.1.1 vs. uniprot
Match: A0A7S3P682_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P682_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.050e-10
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0
Query:   14 PAAEDWHLCCVCMQNTRDAAIVHGATAHQICCFNCAMTIFLRGGDCPCCRRPIDVVVRNFL 74
            PAA+    C  CM+N RDA +VHG T H +CC  CA  +  +G  CP CR  ID+V++++ 
Sbjct:  393 PAAKP---CLCCMENERDATLVHGGTGHIVCCLPCARILQAQGQKCPVCRLDIDLVIKHYF 450          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8585.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5J7N1_9PHAE9.380e-2353.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0003F0E7FA2.890e-1343.24E3 ubiquitin-protein ligase Mdm2-like n=1 Tax=Sacc... [more]
A0A6F9DL71_9ASCI6.850e-1351.85E3 ubiquitin-protein ligase Mdm2 n=1 Tax=Phallusia... [more]
A0A6P4YUP8_BRABE4.710e-1247.17Protein Mdm4 n=4 Tax=Branchiostoma TaxID=7737 RepI... [more]
A0A3M6UPB7_POCDA1.530e-1139.44Uncharacterized protein n=2 Tax=Pocillopora damico... [more]
UPI0006B085A34.090e-1147.17E3 ubiquitin-protein ligase Mdm2-like n=1 Tax=Limu... [more]
UPI00109BA2AF5.390e-1141.38uncharacterized protein LOC110244124 isoform X1 n=... [more]
A0A7M5WWR9_9CNID6.970e-1148.08RING-type domain-containing protein n=1 Tax=Clytia... [more]
A0A2B4SU88_STYPI9.920e-1139.44E3 ubiquitin-protein ligase Mdm2 n=3 Tax=Stylophor... [more]
A0A7S3P682_9STRA1.050e-1044.26Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 13..74
e-value: 4.6E-19
score: 69.6
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 20..67
e-value: 1.6E-10
score: 40.7
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 16..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8585contigP-wetherbeei_contig8585:540..764 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8585.1.1mRNA_P-wetherbeei_contig8585.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8585 540..764 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8585.1.1 ID=prot_P-wetherbeei_contig8585.1.1|Name=mRNA_P-wetherbeei_contig8585.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=75bp
SDVSAKIRALHREPAAEDWHLCCVCMQNTRDAAIVHGATAHQICCFNCAM
TIFLRGGDCPCCRRPIDVVVRNFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD