prot_P-wetherbeei_contig8538.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8538.2.1
Unique Nameprot_P-wetherbeei_contig8538.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length176
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8538.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001606ARID DNA-binding domainSMARTSM00501bright_3coord: 34..126
e-value: 1.7E-8
score: 44.2
IPR001606ARID DNA-binding domainPFAMPF01388ARIDcoord: 41..121
e-value: 4.4E-10
score: 40.1
IPR001606ARID DNA-binding domainPROSITEPS51011ARIDcoord: 33..125
score: 17.132969
NoneNo IPR availableSMARTSM01014ARID_2coord: 30..121
e-value: 2.1E-5
score: 34.0
NoneNo IPR availableCDDcd16100ARIDcoord: 41..121
e-value: 5.56593E-15
score: 64.6864
IPR036431ARID DNA-binding domain superfamilyGENE3D1.10.150.60coord: 21..130
e-value: 1.9E-15
score: 58.4
IPR036431ARID DNA-binding domain superfamilySUPERFAMILY46774ARID-likecoord: 41..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8538contigP-wetherbeei_contig8538:1821..2480 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8538.2.1mRNA_P-wetherbeei_contig8538.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8538 1752..2480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8538.2.1 ID=prot_P-wetherbeei_contig8538.2.1|Name=mRNA_P-wetherbeei_contig8538.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
MQQQEPSRCRQPDGSAGGCTFYQLESLYQNAGDLDRLGRARQIRQFYVAR
GDARWDRLPSMRGTPLDMCRLLEAVLGQGGVQAVAASQRWEVICTAVRLP
YTSETAARLFKLYQLYLFDFEQAYRLRSGGGCGGGGGLTAVNNVPAMSAQ
PAPAAALPAASHTGLVSAPAPPPAAY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001606ARID_dom
IPR036431ARID_dom_sf